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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0218900 |
| Transcript ID | LotjaGi2g1v0218900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT1G67300.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9FYG3|PLST2_ARATH Probable plastidic glucose transporter 2; TrEMBL-Plants: tr|K7LET9|K7LET9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0218900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:67382906..67387360) extracted from Lotus japonicus Gifu genome v1.2.
AATACCCCCTCAGGAAATTCCTACTTGTGAAACTCTTGCCATCTTTCCAATATAATCCTTTCAATATTTCATTATACAAC TAAAATGGAAAATAATCTAACATCCATAGAGATCTGAGTTTCATTTCTATGCTGTTGCAATTGCTTTTACTATTGATTAC TGATAATTTGTAATAGATTGCAGTGCTGAAAATGATCCTTGAAAATTGAAAAGATGGCCTGTGTTAATGATGTACTGCAT ATTTTGATGAGCTCTTCAATCACGGTGACTACTAACTATGTGTTTTATATGACTGCTAGATCTTTTAGGCAACGGCTTGG ATAAGGGAACCTCAAATCCTTCATGGAAGCTTTCTTTACCGCATGTTCTTGTGGCGACCATTTCTTCATTCCTATTTGGA TACCATCTCGGGTTTGTTATTTCATAGCTTCACGTTTTCCATGCCCTCTGTTGATTCCTTTGCTTTAATTGTGAACCCAA TAAAGACTTCAATTTTGATCCTTAGAATTTTTGGGTTCTATGCAGAGTAGTTAATGAACCGCTTGAGAGTATTTCTACAG ATCTTGGGTTCAGGGGAAATACCTTGGCAGAAGGTGACAGAAGATTCCAAAAGCCTGTGCTTAATTTAATGTCATAGTAT AAATTTAGAATAATTAGAGTTTTTTTTGAAGGTCTGGTGGTAAGCATATGTCTTGGTGGTGCCTTGATCGGATGCCTACT GAGTGGCTGGATTGCTGATGCGGTGGGGCGGCGTAGGGCTTTCCAGTTGTGTGCTGTGCCAATGATAATTGGTGCTTGTA TGAGGTTATACTTCCAGAACCAATATATATTGTTTGAAACATTCTGCTTTTTCATGTAATAAATGGAAATTATCTTTGCA GTTTATGGTTTCATCCCTCTCTCATTTGGGTTTGGTGTGCTATGATTTAATTTAAAACCCATCTCACAGCTTTGAAGGGA GGGTAATCAATACTATTATGCATTTTTTTAATGAATAATGTAAGCTTTTGGTTGTCATTTTCATTTTAGAAGCCAAGATA CAACATCATCACCTATCATAGTAAGATGGGTGAAGAACATATGCTTTTCTTCTTTCTTATATTTTGAGTATATCCGGTCT AATGGAATAAAACAGTAGAGCAAACCACCAGTTTAATTAATTTCTAAATTACTGGTGGGAAAGGTGTGCTGTAAGAAGGC TTAGTTTTTATTTTTAGGGGAAAGGCTTAGATTTCCTTACTGTTATATAATTTATACTGCAATGTTTTTAAGTTGCTTTG CTGAAACATCTGACCCCTGTATGTATTTCACTTTGATCGAGTGACAATTTTTACCTTTATCTTTTCAAATCTAAGTTCTT ATGACCAATTCTCCCATTGGAAAATTCTGCATTTGCAGTGCAGCAACAAACAACTTGTTTGGCATGCTAGTAGGAAGGCT ATTTGTTGGGACTGGCCTGGGCCTTGGCCCTCCTGTTGCCTCTCTGTATGTGACAGAGGTATGTGAATGGTTGCCTTTGT CTCATTGACTAGGCTGAAAATTTACTTGGCTATATTCACCTGATTACTGTCTTGAATGACAGGTTTCTCCTGCTTTTGTG CGGGGTACATATGGGGCCTTCATCCAGATTGCAACATGCCTTGGTCTTATGGGAGCTTTATTTATTGGAATTCCTGCCAA AGAAATTTCTGGATGGTATGATATAAATCTTAAAATCATATTTTATGCTGTTTACACACAATCTTCTATAAATACTTCCT GAATTTTTTTAACTCAGGTGGCGGGTTTGTTTCTGGGTATCTACCATTCCGGCAGCTATACTTATTGTGGCTATGATCTT CTGTGCAGAGAGTCCGCATTGGTTATACAAGGTTGACACCTTATACTATTTCATTTCGATATTTTCTCGTTACTATTTTT TGTAACTCATTGTTTCTGTATTTGTTTGAGTCTCTTGAAATTTCTATGTAAGATAATGCTAAATGTTTGTTCAAGATGTC CTCTTCTGCTGCCTCTTTTTGTATTCACATTTAGAACTAATTGAAAGCTTGATTAAACAATAGAACACTCTAGAATATAA AAAGCTAGAGGATGAGTATGCTTAATTTTATGGTGTTGCATATTTAACCTTTAAGGTGGTATGGACATGTACAAAGAGGA CCTTTAGGGGCACCGGTGAAAAGGGTTGATAACATGGTATTTAGTCCTTTGGAGAGAGGTAGAGGGTGGCCAAAAAGAAC TTGTGAAGATATTGTTAATAATGATCTTGTTATCAATAATATCCCTCGTAATCTTGTTTTTGGCCAAAAAGTTTATTCTT ACTTCTACTATTGAGTGCTCTTCCCTACATCTCTCTCTTACTCATCCTTTACATAGTCATTGATCATTCCTATCTGTTGT GATATAGCAAGGAAGAACTTCTGAAGCAGAAGCTGAGTTTGAGAGGGTTTTGGGTGTATCCGAAGCAAAATTTGCAATAT CTCAGCTATCCAGGGCAGATAGAGGAGATGACACTGAGACTGTGAAGCTCTCCGAATTACTTCGTGGTCGCCATTCTAAA GGTGTTTATTTTTCCTGCTTTATCCCTAGGATAGTTGTGGGTGTCAGTCATTGTTGTTATCTTGTCGCTGGTTTCTTTAG GTTTCCAAAAGTTATCTTTTATTCACGAGTTCATTTTGCAGTTGTTTTTATTGGATCAACCCTATTTGCTTTACAACAGC TATCTGGTATAAATGCTGTGTTTTATTTCTCTTCAACTGTTTTCAAAAGTGCTGGAGTGCCATCAGACATTGCAAACGTC TGTATAGGGATTGCTAATTTGGCAGGTATGGATACATGTGCCCAGGTTATAAATCCAAATTTATTGAGTTATTCTATTCT CTAATGCTAGACTTCTTTTCTTCTTTCCTCAGGATCTATCGTTTCTATGGTTTTGATGGATAAGCTTGGAAGGAAGGTCC TACTCTTTTGGAGTTTCTTTGGCATGGTAAATTATTATGAGTTGATGTTCTACTAGTATTTCTTTGTTTCCCTTATTATT CCAAGTGTAGCATATCATCACATTACGGGTGATTATCACAGCACATGAAAATATGGGACTCAAGGGGGTGTATATGTTAA TTTAGAGGACACTTTTTTTTGGAATTTGAACTAGTGAAGCATGCTTGCCTGGCTGCCTGGCCTTCTGTTGTGGGGAAAAT GCCTTTTGTTGTGTTAATTTTTTTATAAAAGACAAACCTGGCTTTCAATTACAATTTTGCTTTATTTTGAACTGTATAGG CAATATCAATGATCCTTCAAGCCACAGGAGCAAGTTCACTTGTATCAAACATGGGGCCTCTGTACTTTTCTGTTGGTGGC ATGTTACTGTGAGTATCCTTTAACTATGAATGTGGATGGATGCACCTATAATGAGAATTATGAATCAAGTTAAATTCATG TTTCTGGAAATTGTGACATGCATTTCTTAGTTGTAAAGGCAAGATAATATGCGGATGCTTGTAATAGAACTTCCTAGATT TGTCAGTGTTTAACTCAGCAAGATATTTAATATTGGTATCATTGTCAGAAAAATCAAGGTCCTCAGCCTGTAATTAGAAC CTTTGGAAGTTATAATGAACCAGAAAAAATCAAGTATGAGGCAGCCTCTAACTTGGTGTATGTTTCCGTATAAATGGAAA TTGAGGATGAAATGACGATAAATTGACAATTTAACATTCAATTACTTAGTTCATATTGCCAGGATCTGTGAAGGGTACAC AGTTATCACTCTGAACAGTCGCCTCGAGCTAGGGGTGCATGCGGTGGCCTGTCAGGCATACACTTCCGGAATATGAACAC TTGATTTATTATTCTTTCATGCAGGTTTGTCTTAACATTTGCTCTCGGGGCTGGCCCAGTTCCGGGTCTCCTTCTACCTG AAATCTTTCCTGGTCGAATCAGAGCCAAAGCCATGGCAATCTGTATGTCAGTTCATTGGGTAATTTTCTTCTGCTTCTTT GATTTATAATTTCTGTTGTCTTATTGTGAACTATATGGGCTATCGGCTGCATACCATTTAGTCTAGATGAGTTTGGTAGG TTATGTTCTACAGTTTTGATTTATTATTGTGCAACTCTACCAAGGTTGAATTAAGAAAATGATGCCTGCTGAAATTTCCT GCAATCTTCGCCAACTCTTGAAACAGCACTATTCACAATGACCTCGAAGAAGGGAAAATCTCATTATTTATGGAATCCTT TTCTCATTAGGTTTCATGATTTTATTGTACAGGTCATAAATTTCTTTGTTGGATTACTGTTCTTGCGTTTGCTGGAGAAA CTGGGTCCACAGCTGCTTTACTCTATGTTCGCTACCTTTTGCATCATGGCTGTCATTTTTGTAAAAAGAAATGTGGTGGA AACCAAAGGGAAATCACTTCAGGAAATTGAGATTGCACTTCTTCCCCAGGAGTAG
CDS sequence (LotjaGi2g1v0218900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAATTGGTGCTTGTATGAGTGCAGCAACAAACAACTTGTTTGGCATGCTAGTAGGAAGGCTATTTGTTGGGACTGG CCTGGGCCTTGGCCCTCCTGTTGCCTCTCTGTATGTGACAGAGGTTTCTCCTGCTTTTGTGCGGGGTACATATGGGGCCT TCATCCAGATTGCAACATGCCTTGGTCTTATGGGAGCTTTATTTATTGGAATTCCTGCCAAAGAAATTTCTGGATGGTGG CGGGTTTGTTTCTGGGTATCTACCATTCCGGCAGCTATACTTATTGTGGCTATGATCTTCTGTGCAGAGAGTCCGCATTG GTTATACAAGCAAGGAAGAACTTCTGAAGCAGAAGCTGAGTTTGAGAGGGTTTTGGGTGTATCCGAAGCAAAATTTGCAA TATCTCAGCTATCCAGGGCAGATAGAGGAGATGACACTGAGACTGTGAAGCTCTCCGAATTACTTCGTGGTCGCCATTCT AAAGTTGTTTTTATTGGATCAACCCTATTTGCTTTACAACAGCTATCTGGTATAAATGCTGTGTTTTATTTCTCTTCAAC TGTTTTCAAAAGTGCTGGAGTGCCATCAGACATTGCAAACGTCTGTATAGGGATTGCTAATTTGGCAGGATCTATCGTTT CTATGGTTTTGATGGATAAGCTTGGAAGGAAGGTCCTACTCTTTTGGAGTTTCTTTGGCATGGCAATATCAATGATCCTT CAAGCCACAGGAGCAAGTTCACTTGTATCAAACATGGGGCCTCTGTACTTTTCTGTTGGTGGCATGTTACTGTGA
Protein sequence (LotjaGi2g1v0218900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIGACMSAATNNLFGMLVGRLFVGTGLGLGPPVASLYVTEVSPAFVRGTYGAFIQIATCLGLMGALFIGIPAKEISGWW RVCFWVSTIPAAILIVAMIFCAESPHWLYKQGRTSEAEAEFERVLGVSEAKFAISQLSRADRGDDTETVKLSELLRGRHS KVVFIGSTLFALQQLSGINAVFYFSSTVFKSAGVPSDIANVCIGIANLAGSIVSMVLMDKLGRKVLLFWSFFGMAISMIL QATGASSLVSNMGPLYFSVGGMLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 248 | 248 | 3.53E-33 | ||
| ProSiteProfiles | 1 | 264 | 264 | 23.032 | ||
| PANTHER | 1 | 264 | 264 | 1.2E-148 | – | |
| Pfam | 1 | 248 | 248 | 1.4E-52 | ||
| CDD | 1 | 264 | 264 | 6.89901E-50 | – | |
| PANTHER | 1 | 264 | 264 | 1.2E-148 | – | |
| Gene3D | 1 | 264 | 264 | 6.8E-58 | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 18 | 39 | 22 | - | – | |
| PRINTS | 18 | 37 | 20 | 4.6E-6 | ||
| Phobius | 40 | 50 | 11 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 51 | 73 | 23 | - | – | |
| Phobius | 74 | 78 | 5 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 79 | 101 | 23 | - | – | |
| Phobius | 102 | 161 | 60 | - | – | |
| Phobius | 162 | 186 | 25 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| PRINTS | 173 | 183 | 11 | 4.6E-6 | ||
| Phobius | 187 | 197 | 11 | - | – | |
| TMHMM | 198 | 217 | 20 | - | – | |
| Phobius | 198 | 218 | 21 | - | – | |
| ProSitePatterns | 214 | 230 | 17 | - | ||
| Phobius | 219 | 224 | 6 | - | – | |
| Phobius | 225 | 249 | 25 | - | – | |
| TMHMM | 227 | 249 | 23 | - | – | |
| Phobius | 250 | 264 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0218900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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