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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0224300 |
| Transcript ID | LotjaGi2g1v0224300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q6F303|PHP5_ORYSJ Pseudo histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|K7K150|K7K150_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0224300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68050448..68053136) extracted from Lotus japonicus Gifu genome v1.2.
ATATTACTATATTATTCACCCGGGATACGCGGGATCAACATCTAGTATATTTTATTATAAAAACTTTAAAATATATTATA TTTAACTCAAATAATAAACTATATTATTATATATTATATTTATTATATATTGTTATATTATTATCGTGTTTATATTTTGT ACCTTTTTTCTTGCTAAGAATTAATGCACGCATACATGCTTTGTACCTATAGCTAAATTTCATTCTATAAGTATAAATTT GGTTTTGTGGCAACCATTGCATATTCAAAGCCTCTCAGATATATCTCCTGCAATTATTCAGACAATGGAGAGTTCTGATG ACTTGCAGAAAAAAATCGCAATGATGAAGCAGTCTTTCTTTGATGAGGTTTTTTCCTTCTCTGATACAAATTTTGACATG GTTGTTTTGATTCATTTCTGTTCTGTTTTTCATTTTTGAGATTTTTTTAGTATTATTTAAGTGTAAAATTTCACATTTGA TATTAGCTTGATTTCCCCACAATAGGAAAACCTCTCATTATATCTACCATGGTGGAATGTCAACTTATAATTTATTTATG GAAAAAAAATTGGAGGAAATTTTGGTGAGTCAACATAAAATTTAGTCTTAAACATCAAACTATAATTTTCTCTGAAGCAT TCTCAAGATTGAGGCGTGTGTGCTATTTCCTCAGCTTAATTTGATTTTCTTACCCCTTTTTGTAGTTTTTGGTTGTCCTT TTCACGCCTCACAAACTAACCAATCGCATATATGTATCTTATTAGAATTAAAATTCAAAATTTCTCTTTCTTGACATGAT ATCTCCAAAGATTGATGTGTTTGTTTAGGTTTGTATTCAATATCTCAAAATCATTCACAATATTGTTTACTGTGCCTTTA AATTACTAGAATCGTGAAAGAGTATAAACTATAATATATAGTTTCCTTATTGGATATGAGTTGGAGTTTGTGTGTACCAC TTATGCAAACACATTGAACAAACTTGACAAATATAGTCTCTTGTGGAGATTTTCAAACACAAATAACTCAATTTAGTTAT TAACTTATGTTTAAATGATGAAAATTTGCATTTGTGTAAAATGTTTCAGGGATTTCTGGATCCAACCCAATTTCAACAAC TGGAGAATTTGCAAGACAAGGAAATGCCGAACTTTCTTAAGGATGTTTTCTCTTTGTACTTCATGGATGCAACTAGGAAG TATGCTGAAATTGAGCAAAACCTGTGAGTAAACGTGCAGAAACACACATTAATACTAGAAAATTAATGTATATTATTTTT ACTACATCATAATGTTAAATTAGTGTTTCTGTTGAAATTTCTTTCATATTCATTTTCATACACATGCAACATAAATTTTT AATTGATCGATTGTGTATTTACAGTCACCAAGAATCTTCAGAGAAGCAAAGGAAAGACTTGAATAGGCTTATTCTCAAAC TCAAGGGAAGTGCGATGGAGTAAGTACTTTTCTTCCTCTTCCCCAATTAAACTTCAAAACATATTTTATTGACTTTATAC AATTAATTAAGAATGAGCAATATTACTTTTTCAGCATTGGTGCTCTGAAGACTTCAAATGAAGTTAATAAGATGATAGAT TTTTTCAAAGAAGGCAATATGGAAAGGTGATTATAACACTTGATCCCAATTTGTACCCCTATTTCCTTCTAGCCAAATAA ATTATTGCAAGATTGAAAATTCTGTTCTCTACTTACATGCTAACTAAGCCATATATGAATTATGCAGGTTCGTGGCTTCT TTTGAACAAGTGAAGATAGAGGATGAAAATTTGAGGGTGAAAATGGATCCTTACTTTCAGGTATGATGCACAAACAACAC ACTGATTATAATTGAAGGAACTCCTAAGAAACTTACTTTTGAGAAAAAAAGTAAAGAATTATAGTTAGTTGAAAAGTAAC AATGGCTATTTAAATATGTTTATAACTTATTCTACATATCGATAGAAAACATTAAATATTTTAATTTTTTTCTTCCAAGT GAATTTATCACTGGGAGAAGTTAAATTTGTCATCTCACCAATAACTTTTTTCTAGAAAAAAATTCTTTTAAGTGCTGGAA AAAAATCTTTTTCTAGAAAACATTAAATTGTTACTCATTTTTAGTTTTTTTTTTTTTACATTTTTAAAAAGATATAATGT ATGAGATTATAGAAGGATGATAGATTTTCAGTTGTGCTTTTCTTTTACTTTTTCCATTTCCATAATTGCATCAAAAAAGT GAGACAAAAAAATCCACATAACTGAATTGAACATATATAATAAGTAATATGTAATTTGATAAATATTGTTGCAGTTGCTT GAGCAAGAAGGGTCCTCTGGGGAAGAAGAGAATCCTGAGTCCCTAGCTGTTGAGAATCGTACTCTCAAGTGAAGATATGT AGCAATGTATGGGTGTTGCGGTTGAAGTGGAAGTGACTTAAGACTTGATTTGTTTCACCTTAATTAGCTAAATCTGGATC TGTTGCTCTGTACTCAAATCTTATATGGTTTTCTTGTTTCTGCATTCCATTTTTAAATAAGGGTTTACTCCATGCCCATT GAAATTCCTAATAAAGTACTCAAGAATAATATATTTGGTGTGTTCAAATCTTGTTTATTATTGAGTGGTTGGTTAAAGTG ATACATGTTTATTTTTATTCAGAAATATCATGATTTCAAGTATTGTGAA
CDS sequence (LotjaGi2g1v0224300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTTCTGATGACTTGCAGAAAAAAATCGCAATGATGAAGCAGTCTTTCTTTGATGAGGGATTTCTGGATCCAAC CCAATTTCAACAACTGGAGAATTTGCAAGACAAGGAAATGCCGAACTTTCTTAAGGATGTTTTCTCTTTGTACTTCATGG ATGCAACTAGGAAGTATGCTGAAATTGAGCAAAACCTTCACCAAGAATCTTCAGAGAAGCAAAGGAAAGACTTGAATAGG CTTATTCTCAAACTCAAGGGAAGTGCGATGGACATTGGTGCTCTGAAGACTTCAAATGAAGTTAATAAGATGATAGATTT TTTCAAAGAAGGCAATATGGAAAGGTTCGTGGCTTCTTTTGAACAAGTGAAGATAGAGGATGAAAATTTGAGGGTGAAAA TGGATCCTTACTTTCAGTTGCTTGAGCAAGAAGGGTCCTCTGGGGAAGAAGAGAATCCTGAGTCCCTAGCTGTTGAGAAT CGTACTCTCAAGTGA
Protein sequence (LotjaGi2g1v0224300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSDDLQKKIAMMKQSFFDEGFLDPTQFQQLENLQDKEMPNFLKDVFSLYFMDATRKYAEIEQNLHQESSEKQRKDLNR LILKLKGSAMDIGALKTSNEVNKMIDFFKEGNMERFVASFEQVKIEDENLRVKMDPYFQLLEQEGSSGEEENPESLAVEN RTLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 144 | 144 | 8.3E-45 | – | |
| PANTHER | 1 | 144 | 144 | 8.3E-45 | – | |
| Gene3D | 1 | 150 | 150 | 2.1E-27 | ||
| SUPERFAMILY | 20 | 142 | 123 | 2.65E-16 | ||
| Coils | 52 | 72 | 21 | - | – | |
| MobiDBLite | 143 | 164 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi2g1v0224300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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