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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036641
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.981s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0360200_LC.1
n.a. Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0360200_LC LjG1.1_chr1 83522669 83529921 +
3 domain predictions
1 GO term
LotjaGi1g1v0360200_LC.3
n.a. Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0360200_LC LjG1.1_chr1 83522727 83530922 +
3 domain predictions
1 GO term
LotjaGi1g1v0776200.1
n.a. Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|K7KGR6|K7KGR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0776200 LjG1.1_chr1 134850241 134852040 +
3 domain predictions
1 GO term
LotjaGi2g1v0224300.1
n.a. Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q6F303|PHP5_ORYSJ Pseudo histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|K7K150|K7K150_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0224300 LjG1.1_chr2 68050448 68053136 +
3 domain predictions
1 GO term
LotjaGi3g1v0008600.1
n.a. Histidine phosphotransfer protein; TAIR: AT1G80100.1 histidine phosphotransfer protein 6; Swiss-Prot: sp|Q9SSC9|AHP6_ARATH Pseudo histidine-containing phosphotransfer protein 6; TrEMBL-Plants: tr|G7II71|G7II71_MEDTR Histidine phosphotransfer protein; Found in the gene: LotjaGi3g1v0008600 LjG1.1_chr3 979448 980776 +
3 domain predictions
1 GO term
LotjaGi3g1v0021400.1
n.a. Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q6F303|PHP5_ORYSJ Pseudo histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|G7IHZ9|G7IHZ9_MEDTR Histidine phosphotransfer protein; Found in the gene: LotjaGi3g1v0021400 LjG1.1_chr3 2237412 2239735 +
3 domain predictions
1 GO term
LotjaGi3g1v0072600.1
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT5G39340.2 histidine-containing phosphotransmitter 3; Swiss-Prot: sp|Q6VAK3|OHP1_ORYSJ Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0072600 LjG1.1_chr3 7914328 7924987 -
3 domain predictions
1 GO term
LotjaGi3g1v0072600.2
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT5G39340.1 histidine-containing phosphotransmitter 3; Swiss-Prot: sp|Q6VAK3|OHP1_ORYSJ Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|A0A0B2QIZ1|A0A0B2QIZ1_GLYSO Histidine-containing phosphotransfer protein 1; Found in the gene: LotjaGi3g1v0072600 LjG1.1_chr3 7914328 7924987 -
3 domain predictions
1 GO term
LotjaGi3g1v0175000.1
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175000 LjG1.1_chr3 24292935 24307710 -
3 domain predictions
1 GO term
LotjaGi3g1v0175000.2
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175000 LjG1.1_chr3 24293018 24307804 -
3 domain predictions
1 GO term
LotjaGi3g1v0355900.1
n.a. Histidine phosphotransfer protein; TAIR: AT1G80100.1 histidine phosphotransfer protein 6; Swiss-Prot: sp|Q9SSC9|AHP6_ARATH Pseudo histidine-containing phosphotransfer protein 6; TrEMBL-Plants: tr|A0A0B2S001|A0A0B2S001_GLYSO Histidine-containing phosphotransfer protein 6; Found in the gene: LotjaGi3g1v0355900 LjG1.1_chr3 73773772 73775472 +
3 domain predictions
1 GO term
LotjaGi3g1v0371100.1
n.a. Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q9LU15|AHP4_ARATH Histidine-containing phosphotransfer protein 4; TrEMBL-Plants: tr|A0A0S3SZT5|A0A0S3SZT5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0371100 LjG1.1_chr3 76121380 76123285 +
3 domain predictions
1 GO term
LotjaGi5g1v0217900.1
n.a. Histidine-containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3S0F2|I3S0F2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0217900 LjG1.1_chr5 52390096 52392201 -
3 domain predictions
1 GO term
LotjaGi5g1v0260400.1
n.a. Histidine phosphotransfer protein; TAIR: AT1G03430.1 histidine-containing phosphotransfer factor 5; Swiss-Prot: sp|Q8L9T7|AHP5_ARATH Histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0260400 LjG1.1_chr5 56889896 56894387 +
3 domain predictions
1 GO term
LotjaGi6g1v0303900.1
n.a. Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 LjG1.1_chr6 62133612 62142095 +
3 domain predictions
1 GO term
LotjaGi6g1v0303900.2
n.a. Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 LjG1.1_chr6 62134029 62136202 +
3 domain predictions
1 GO term
LotjaGi6g1v0303900.3
n.a. Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 LjG1.1_chr6 62134622 62135970 +
3 domain predictions
1 GO term