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IPR036641

Description

IPR036641 is a HPT domain superfamily.

<p>This superfamily represents a domain present at the N terminus in proteins which undergo autophosphorylation. The group includes histidine kinases such as CheA from Escherichia coli, the gliding motility regulatory protein from Myxococcus xanthus, and a number of bacterial chemotaxis proteins.</p> <p>Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [[cite:PUB00013246], [cite:PUB00007866]]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [[cite:PUB00013247]], and CheA, which plays a central role in the chemotaxis system [[cite:PUB00000966]]. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water [[cite:PUB00020801]]. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily.</p> <p>Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [[cite:PUB00042804]]. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk [[cite:PUB00042805]]. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more [[cite:PUB00010651]]. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) [[cite:PUB00011096]]. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK.</p> <p>A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [[cite:PUB00042806], [cite:PUB00042807]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0360200_LC 5
Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0360200_LC 5
Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|K7KGR6|K7KGR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0776200 10
Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q6F303|PHP5_ORYSJ Pseudo histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|K7K150|K7K150_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0224300 7
Histidine phosphotransfer protein; TAIR: AT1G80100.1 histidine phosphotransfer protein 6; Swiss-Prot: sp|Q9SSC9|AHP6_ARATH Pseudo histidine-containing phosphotransfer protein 6; TrEMBL-Plants: tr|G7II71|G7II71_MEDTR Histidine phosphotransfer protein; Found in the gene: LotjaGi3g1v0008600 14
Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q6F303|PHP5_ORYSJ Pseudo histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|G7IHZ9|G7IHZ9_MEDTR Histidine phosphotransfer protein; Found in the gene: LotjaGi3g1v0021400 8
Histidine containing phosphotransfer protein, putative; TAIR: AT5G39340.2 histidine-containing phosphotransmitter 3; Swiss-Prot: sp|Q6VAK3|OHP1_ORYSJ Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0072600 11
Histidine containing phosphotransfer protein, putative; TAIR: AT5G39340.1 histidine-containing phosphotransmitter 3; Swiss-Prot: sp|Q6VAK3|OHP1_ORYSJ Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|A0A0B2QIZ1|A0A0B2QIZ1_GLYSO Histidine-containing phosphotransfer protein 1; Found in the gene: LotjaGi3g1v0072600 5
Histidine containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175000 5
Histidine containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175000 5
Histidine phosphotransfer protein; TAIR: AT1G80100.1 histidine phosphotransfer protein 6; Swiss-Prot: sp|Q9SSC9|AHP6_ARATH Pseudo histidine-containing phosphotransfer protein 6; TrEMBL-Plants: tr|A0A0B2S001|A0A0B2S001_GLYSO Histidine-containing phosphotransfer protein 6; Found in the gene: LotjaGi3g1v0355900 13
Histidine phosphotransfer protein; TAIR: AT3G16360.2 HPT phosphotransmitter 4; Swiss-Prot: sp|Q9LU15|AHP4_ARATH Histidine-containing phosphotransfer protein 4; TrEMBL-Plants: tr|A0A0S3SZT5|A0A0S3SZT5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0371100 9
Histidine-containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3S0F2|I3S0F2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0217900 10
Histidine phosphotransfer protein; TAIR: AT1G03430.1 histidine-containing phosphotransfer factor 5; Swiss-Prot: sp|Q8L9T7|AHP5_ARATH Histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0260400 9
Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 9
Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 9
Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00088 CDD 1 5.88