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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0227000 |
Transcript ID | LotjaGi2g1v0227000.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT5G56580.1 MAP kinase kinase 6; Swiss-Prot: sp|Q9FJV0|M2K6_ARATH Mitogen-activated protein kinase kinase 6; TrEMBL-Plants: tr|K7LII3|K7LII3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0227000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68402546..68406781) extracted from Lotus japonicus Gifu genome v1.2.
AACAAGATGAAGACCAAGACGCCATTGAAACCACTCAAGCTCGCCGTTCCTGCTCAGGAAACCCCCATCACTTCATTCCT GTAAGTTTTCCCATTTTCATCTTCTCTGTACCAACCCATTTCGTTTTCTTTGCTTCATCATTTCAATTCACCCATAAAGG TTCAGTTTTTACTTTCCTTTGCTTCAATTATTGATTTCCAACAAAAAAAGTGTTTTTTGCCCCCAATTTTTATGAAATTG ATTTTGATTATTAAATTTGTCATCAGGACTGCAAGTGGCACATTCCATGATGGAGATCTTCTGTTGAATCAGAAAGGGTT GCGTCTCATCTCTGAAGAAAAGGAATCAAGGGTAACACTCTTTTACTTCACAACCCTAGTTGTTGTTTCTATTGCATGTA TACTGTTTCAATTTTTTTTGGTAGAATTTAGAATTTGCATACCTTCATTCAATAATGATGTTCAGTGATGATTATGTTTA CAGTTTGTGCACTTTATTGCCATCATTCTGCATGAACCATTCATTGATTCCACTTGTTTTTGGTTTCAAGTTTGTAATAT GAAAGACTTGCAATTTGCCTCTTTGAACAGCCTTCAGATGCTAAGGAGCTTGAATTTGACTTCTCACTGGATGACCTTGA AACCATCAAAGTGATTGGAAAGGGCAGTGGTGGTGTAGTGCAACTTGTTCGTCACAAGTGGGTTGGAAAATTGTTTGCTT TGAAGGTTGTCATGCATACTTATTTTCAATTGATTCTTATAAATAGATTTGCCCGTATAATTATCCTTTTTACTCATGAT TGTATATAACCAGAAGCCATGCAAAAGGAAGCACAATATTGGTTTGCTAATTGCTTTAAACTACTAGTTGTCACTTGTCA ATGTCTTAGGATATGTGAACATGGACGATTTTCTATAACTAAATCGATTTATTTATATATATAGGATTACATGGTGTAGG AATTGGGTAAATCTCTTGTAAAGGGCTTAGGAAATGTGAGCTAGAATATTTGTGCAAGCATGTGGTTGCTTATGTGCTCT GAGGATCAATGCTGATGATCATCTTCTTCCAATATTAATTGTTTTAACACGTTAGATCATGAAACAGTTTACCATTGTGA TCTTTCGGTGTTGTTAAATTTTGCCTTTTGAAACAAAGTATTTTGATCAGTTTTGACTTTTGAAGGTTTGACTTTTATAT ATGATAGAAAAAAATCTTCTATTATTGCAGGCCATTCAGATGAATATACAAGAGGAAATTCGAAAACAGATTGTTCAGGA ACTGAAAATAAACCAAGCATCACAGTGTCCACATATTGTAGTTTGCTACCATTCATTCTATCAGAATGGTGTTATATCTC TTGTATTAGAATACATGGACCGGGGTTCTCTAGCAGATATAATCAGACAAGTTAAAACAATTCTGGAACCATATCTTGCT GTAGTTTGTAAGCAGGTATGCTGGAGCATACTGTTTCTTGTTGAAAGTGACAGATTTTATATACTTCTAAAATGCTAATT ATTCATGTCCATATTCCAGGTATTACAAGGCCTTGTTTACTTGCATAATGAAAGGCATGTCATACATAGGGACATTAAAC CTTCCAATCTATTAGTCAATCACAAAGGGGAGGTGAAGATCACTGATTTTGGTGTGAGTGCTATGCTGGCAACCTCAATG GGCCAAAGAGATACATTCGTCGGAACTTACAATTACATGTCGGTATGTAACTTTTCTTCTTTAAGCTTATCCCATATTAC CAGAATCTGCTTGGTATCTCCCAAGCCCTATCAAATTTATGCCCTTTTCCTCTTTCCTCCCTTCCATGAACAGACGTATA AATAATGTTATGATAATTAATGTATTGGTTTGTGGATTTCATTGTTTAGCCGGAAAGAATCAGTGGGAGTACTTATGATT ATAGCAGTGACATCTGGAGTTTGGGTATGGTAGTACTTGAGTGTGCCATAGGACGGTTTCCTTATATACAATCTGAAGAT CAGCAAGCCTGGCCTAGTTTCTATGAACTTTTGGCAGCAATTGTGGAAAGCCCCCCACCTTCTGCTCCATCTGATCAGTT CTCCCCAGAGTTCTGTTCATTTGTGTCATCCTGGTAACAGTTTATTTCTTTTTTACTTTGTTTCATTACAGCCTGATTAT GGTACTCATGCATTTCAAGCTAAGCTGTTTTTTTGTGTTTTGACTGCTTGCCTGGTTGTCCTTTTAGCTATATCTATCTG AGAAATGTGGTGATTAGATTCTAAGAGTGTGTTTGATTTCCTTTTAGCTTTCCAAGACAGTTTTTCCAACTGATTTAAGT TGTTGGATTGAGAAACCATATTGCCCAATAACAAGCTTATTATTCCCAAAGCATAAAGTACATATGGTGAGATAATCTAA AAACTAGAACTGAGCACTACATTTACATTACAAACCAAAAGGTCATGGTTCGACAATATATATATACAATCAAATCAAAT AAAACTAGAATTGAAGGCATAGTTAAGCCTAAAGTTTTATCATCATGTCTAGTAGGATTTCTCAAAATAGTTGCTAGACC CTGTCATAAATTGGACCAACTGAAATCAAATAAAGCCTTGCAATAGATGTATACTAATAGTATTCTAGCAAAATTGGACC AACTTTGAACTAGGATTGAGAACATTGCAAGGAGTCATAAATTCTGAATTTTTTTGGTCAATCATAGGCAAGTATGCTAA CTTTCTAATGAAACTAGTTTCACCTTTAATTACGCTCTGCAACTCAGGGTACAGATTTTTAGGTCAAAGCTGTCTATATG TGTCTAAGCCAGGATTTAGTCTGAATTCCTAACTGAACTGGGATCACTTCAAGTCTCCTAAGTTTCTGATATTCTTACCT GTTATAGGCTTGTACATGAGCTTTCAAATGGAAAAGGCTTGTATATGAAAAATCCAAGGTCTCTAGCTCAAAATATAATT TTTGTTTACAAGCTGTCAGCATGAATCTGAGACAGCAACAACCCTATTCAGCTCTGTTTTCGAAATTTTAGTGGGAACAC ATGCTTCACTGTAAATTTATGAAATTTATACAGAATATACATGTCTTGTGTTTCAAACAAGTTTTGTTTCAACATATTCT GAATTCTATAGGTTAAGATGAGTTTTTAACACAGGCTGTCAAGAACACCTAGAGCCTTCAAAACCTCCAAATGTTCTTCT TCTAATTCATGTGTAAATTACTTTAGAGAACTGCAATACCAATTCAAAGCCAGCACATTATTTTCCAGAACCACTGGCCC TATAAGCACAAAAGAATCCAACCAAAGTCACTAATTTTCTATCCAATTGAACCAAGAATTGTTAAGATTCCAAATACAAC CTACAAAATTTTATAATCAAGATTCAAGACATCACACATAAACCCAGTAGAGTTCCATTGACAATAGTGACACTAATACT CAGCTGAGATCAAGGAAAGCCCATGTAACTGCAAAAACTCAGAAACTTAATATGTAGTTCTGTGTGACAAATCCAGATTC CTAACGAAATGAAATTATACTAACACTTAAATGATAATACCCCAAATCAATTTTTGCTCTCCCTCCTTTGTTTTCGTTTG GATTTACCAACACCAATTTGGTCTCATTTGATTTCTTCTGCGTTCAGAATGCCCACAGGATGAGGATGAAGTGTTTTGAG TTATCCCTTGTACGAATGAAATACTTTCTTAGTATAGTTAAAATGTCCATCTTCTTATATTTTTCTTTCTAATGGTTAAT ATGTAATGTATTATTAAATTAATTATCTCTTGTATAATTTAGCCAATTAACTGATATCATTAATTTAAAATGCATAGAAT TATCAATACTATAATTGAAATTCTGGGGCATTACAGTTGTTTCCCTTCTGCTGTAATTACTGTATGACCGATTTGTTAGT TATATGTGATCCAATAGTACTAAAACCATTGTAAATTCTCTACATATTCTATTGTGTTTTGTATCTAAGTTCATTTCTTG GTTTAATTACAGCATCCAAAAGGATCCTCAGGATAGATTGACATCCTTGGAGCTTCTGGTTAGTAACCTAATGCTCAAAT TTTTGTCTCTTATTTTGTTAAAATTTCTTATTGCTGATGCACCTTTTCTCATTGTACTTTCAGGATCATCCTTTTATAAA GAAGTTTGAAGATAAAGATCTAGATCTCGAGATTTTGGTAGGTAGCTTGGAACCTCCTATAAATTTCCCCAGATAA
CDS sequence (LotjaGi2g1v0227000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGACCAAGACGCCATTGAAACCACTCAAGCTCGCCGTTCCTGCTCAGGAAACCCCCATCACTTCATTCCTGACTGC AAGTGGCACATTCCATGATGGAGATCTTCTGTTGAATCAGAAAGGGTTGCGTCTCATCTCTGAAGAAAAGGAATCAAGGC CTTCAGATGCTAAGGAGCTTGAATTTGACTTCTCACTGGATGACCTTGAAACCATCAAAGTGATTGGAAAGGGCAGTGGT GGTGTAGTGCAACTTGTTCGTCACAAGTGGGCCATTCAGATGAATATACAAGAGGAAATTCGAAAACAGATTGTTCAGGA ACTGAAAATAAACCAAGCATCACAGTGTCCACATATTGTAGTTTGCTACCATTCATTCTATCAGAATGGTGTTATATCTC TTGTATTAGAATACATGGACCGGGGTTCTCTAGCAGATATAATCAGACAAGTTAAAACAATTCTGGAACCATATCTTGCT GTAGTTTGTAAGCAGGTATTACAAGGCCTTGTTTACTTGCATAATGAAAGGCATGTCATACATAGGGACATTAAACCTTC CAATCTATTAGTCAATCACAAAGGGGAGGTGAAGATCACTGATTTTGGTGTGAGTGCTATGCTGGCAACCTCAATGGGCC AAAGAGATACATTCGTCGGAACTTACAATTACATGTCGCCGGAAAGAATCAGTGGGAGTACTTATGATTATAGCAGTGAC ATCTGGAGTTTGGGTATGGTAGTACTTGAGTGTGCCATAGGACGGTTTCCTTATATACAATCTGAAGATCAGCAAGCCTG GCCTAGTTTCTATGAACTTTTGGCAGCAATTGTGGAAAGCCCCCCACCTTCTGCTCCATCTGATCAGTTCTCCCCAGAGT TCTGTTCATTTGTGTCATCCTGCATCCAAAAGGATCCTCAGGATAGATTGACATCCTTGGAGCTTCTGGATCATCCTTTT ATAAAGAAGTTTGAAGATAAAGATCTAGATCTCGAGATTTTGGTAGGTAGCTTGGAACCTCCTATAAATTTCCCCAGATA A
Protein sequence (LotjaGi2g1v0227000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTKTPLKPLKLAVPAQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDAKELEFDFSLDDLETIKVIGKGSG GVVQLVRHKWAIQMNIQEEIRKQIVQELKINQASQCPHIVVCYHSFYQNGVISLVLEYMDRGSLADIIRQVKTILEPYLA VVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLATSMGQRDTFVGTYNYMSPERISGSTYDYSSD IWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAPSDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPF IKKFEDKDLDLEILVGSLEPPINFPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 345 | 345 | 3.9E-125 | – | |
PANTHER | 1 | 345 | 345 | 3.9E-125 | – | |
PIRSF | 2 | 318 | 317 | 4.1E-27 | – | |
Gene3D | 38 | 140 | 103 | 9.7E-20 | – | |
SUPERFAMILY | 66 | 339 | 274 | 7.15E-75 | ||
CDD | 67 | 325 | 259 | 3.38016E-145 | – | |
SMART | 69 | 321 | 253 | 8.6E-73 | ||
ProSiteProfiles | 69 | 321 | 253 | 43.354 | ||
Pfam | 70 | 321 | 252 | 1.5E-61 | ||
Gene3D | 142 | 338 | 197 | 6.8E-60 | – | |
ProSitePatterns | 179 | 191 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0227000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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