Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0229700 |
Transcript ID | LotjaGi2g1v0229700.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase family protein; TAIR: AT5G26110.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q96S44|PRPK_HUMAN TP53-regulating kinase; TrEMBL-Plants: tr|I3SU70|I3SU70_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0229700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68822615..68824162) extracted from Lotus japonicus Gifu genome v1.2.
ATATCAATTCTAAGGACTGATCGATTCTCCCAAAATTAATTTTTGCTAAACAAATTTTCCAAAAAGTATTTCTACAATTC TATTATACTCTGAAACAAACGTTTCTTTGTCTTTTCTTGTTTACTTGATCAGCCCACCTTTTTGGATAATTCGCATCGTG AAATCTCACATTTTGTGCTCAGTTTATCTTGTTTTGCATACTTATATATTGGACCTGCAATAGATGCAAATTCATATGGC TTTTTTATGTTCTTTTTTCAGAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAGGTCTGTTATCAAGGAACGTTTCTCAAA GAAATACAGACATCCAATTTTGGATTCTAAGTTGACACTCAAGCGCTTAAATGCGGTCAGAGTTAGATAAAATTGCATTA AGTTTAATTCTGATGAAGTTCTTTATATTTGTCCGTGTCCAGTGCATGTCTTGAATACTTTGTTCCATTAATTAATTGTT GGAGCAGGAGGCTAGGTGCATGACCAAAGCAAGGCGCCTTGGGGTTCGTACTCCCGTGCTTTATGCTGTGGATCCTGTTT TGCACACATTAACATTTGAATATGTTGACGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTTGGGTCTCTTGGTGTCAAC GAAGAACGTATGGGCAACATTGCGTCCCAAATTGGTGATGCAATTGGAAAGTTGCATGATGGAGGTCTTGTTCATGGTGA TTTAACTACATCAAACATGTTATTGAAGAATGATACCAATCAGTTGGTGAGTTCATTCATATCTTCATAGCTCCAGATAT CCAGTAATATCCATTACACTTACTCAGGTTATGCAATATGAGAAGTATAATCAACTTGTGTTACAAAAGTTGAGTGTATT TTATCTAGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCGGAAGATAAGGCTGTTGATTTGTATGTCCTG GAAAGAGCTATTCTTTCAATGCATTCTTCATGTGGCAATGTGGTAAGCCAACTTCTCATTTTCCCCTTAGTCCTAACTGT TATGCTGTAAAATTTAAGGAGATGAAAACATGAATATGCTTGGCTTGCATGTATTGAGAATTTGAATTGGAATGCATTCC ATATGAGGTGAGCTCTTTATCTCACAAATAAACTTATCCTTGACCAACAATTATGCTTTCATTTGTACCAAGTGAACTTA CTTGCCTTTTGGTCTAACAAGGTTGAGACTAACTTAACAAGCCCCAAAGGTTTGTTCTGCTATGATATGGTTTCTGCATG GACACACGAAAGTTATGAACAAGTTATCAATTATCAATTGACTTACATGTTTTAATATCATAATTTGGTCTGGACAGATG GATCAGATACTTGCAGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGGTGCTGCTTT ACTCTTGTTTAAAATTAAGACATTTTCTTCAAGAACTAGTGCTTACCTGCTTGCCTTTTCTAACTTGTAGTGCGACAAAG AGGACGAAAGAGGACCATGGTTGGGTGA
CDS sequence (LotjaGi2g1v0229700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAAAGCAAGGCGCCTTGGGGTTCGTACTCCCGTGCTTTATGCTGTGGATCCTGTTTTGCACACATTAACATTTGA ATATGTTGACGGCCCTTCAGTCAAAGATGTGTTTCTTGAATTTGGGTCTCTTGGTGTCAACGAAGAACGTATGGGCAACA TTGCGTCCCAAATTGGTGATGCAATTGGAAAGTTGCATGATGGAGGTCTTGTTCATGGTGATTTAACTACATCAAACATG TTATTGAAGAATGATACCAATCAGTTGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCGGAAGATAAGGC TGTTGATTTGTATGTCCTGGAAAGAGCTATTCTTTCAATGCATTCTTCATGTGGCAATGTGATGGATCAGATACTTGCAG CATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGTGCGACAAAGAGGACGAAAGAGGACC ATGGTTGGGTGA
Protein sequence (LotjaGi2g1v0229700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKARRLGVRTPVLYAVDPVLHTLTFEYVDGPSVKDVFLEFGSLGVNEERMGNIASQIGDAIGKLHDGGLVHGDLTTSNM LLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRT MVG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 163 | 163 | 1.1E-96 | – | |
ProSiteProfiles | 1 | 163 | 163 | 13.489 | ||
TIGRFAM | 1 | 157 | 157 | 1.2E-39 | ||
PANTHER | 1 | 163 | 163 | 1.1E-96 | ||
SUPERFAMILY | 8 | 111 | 104 | 1.48E-18 | ||
Pfam | 23 | 99 | 77 | 5.2E-11 | ||
CDD | 24 | 97 | 74 | 6.46384E-12 | – | |
Gene3D | 44 | 160 | 117 | 5.5E-36 | – | |
ProSitePatterns | 70 | 82 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0229700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…