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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008266
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 103 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.529s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1828350.1
LjNfr5 Nod-factor receptor 5 [Lotus japonicus] gi|37651074|emb|CAE02597.1| chr2 27399749 27402036 -
2 domain predictions
2 GO terms
Lj0g3v0001859.1
n.a. Receptor kinase [Medicago truncatula] gi|357501751|ref|XP_003621164.1| chr0 548278 551234 +
2 domain predictions
2 GO terms
Lj0g3v0122779.1
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr0 54895363 54896700 +
2 domain predictions
2 GO terms
Lj0g3v0133279.1
n.a. n.a. chr0 60952903 60954633 +
2 domain predictions
2 GO terms
Lj0g3v0196449.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 95785653 95786482 -
2 domain predictions
2 GO terms
Lj0g3v0266969.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 138344724 138346275 -
2 domain predictions
2 GO terms
Lj0g3v0282649.2
n.a. n.a. chr0 146544935 146547381 -
2 domain predictions
2 GO terms
Lj0g3v0282659.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 146545606 146547150 +
2 domain predictions
2 GO terms
Lj0g3v0284579.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 147661718 147663469 -
2 domain predictions
2 GO terms
Lj0g3v0306109.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr0 159627112 159629719 -
2 domain predictions
2 GO terms
Lj1g3v2612680.1
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr1 30322942 30328402 -
2 domain predictions
2 GO terms
Lj1g3v2612680.2
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr1 30322942 30328402 -
2 domain predictions
2 GO terms
Lj1g3v4252300.1
n.a. PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Glycine max] gi|356572038|ref|XP_003554177.1| chr1 50206855 50211185 +
2 domain predictions
2 GO terms
Lj1g3v4372190.1
n.a. PREDICTED: probable protein kinase At2g41970-like [Glycine max] gi|356570526|ref|XP_003553436.1| chr1 51216368 51219959 +
2 domain predictions
2 GO terms
Lj2g3v0911680.1
n.a. protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1| chr2 13863957 13869308 +
2 domain predictions
2 GO terms
Lj2g3v0911680.2
n.a. protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1| chr2 13865146 13869308 +
2 domain predictions
2 GO terms
Lj2g3v2879660.1
n.a. DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|357493253|ref|XP_003616915.1| chr2 37548182 37548798 +
2 domain predictions
2 GO terms
Lj3g3v0303780.1
n.a. PREDICTED: LOW QUALITY PROTEIN: inactive protein kinase SELMODRAFT_444075-like [Glycine max] gi|356550454|ref|XP_003543602.1| chr3 2207888 2214202 +
2 domain predictions
2 GO terms
Lj3g3v2319420.1
n.a. Mitogen-activated protein kinase HOG1 [Medicago truncatula] gi|357513579|ref|XP_003627078.1| chr3 28948302 28952424 -
2 domain predictions
2 GO terms
Lj3g3v3312860.1
n.a. PREDICTED: probable serine/threonine-protein kinase GCN2-like [Cicer arietinum] gi|502148953|ref|XP_004507335.1| chr3 40392865 40412775 +
2 domain predictions
2 GO terms
Lj4g3v0912430.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490576|dbj|BAI79275.1| chr4 13596272 13598047 +
2 domain predictions
2 GO terms
Lj4g3v0912440.1
n.a. n.a. chr4 13596317 13598047 +
2 domain predictions
2 GO terms
Lj4g3v1345800.1
n.a. PREDICTED: PTI1-like tyrosine-protein kinase 3-like isoform X1 [Cicer arietinum] gi|502121621|ref|XP_004497390.1| chr4 21124862 21128398 -
2 domain predictions
2 GO terms
Lj4g3v3016320.1
n.a. protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1| chr4 40440165 40445098 -
2 domain predictions
2 GO terms
Lj5g3v0070850.1
n.a. PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cicer arietinum] gi|502125896|ref|XP_004499107.1| chr5 364817 370753 +
2 domain predictions
2 GO terms
Lj5g3v0070850.2
n.a. PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cicer arietinum] gi|502125896|ref|XP_004499107.1| chr5 364817 370753 +
2 domain predictions
2 GO terms
Lj5g3v2240970.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439027|ref|XP_003589790.1| chr5 32249647 32253382 -
2 domain predictions
2 GO terms
Lj5g3v2240980.1
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32255079 32256963 -
2 domain predictions
2 GO terms
Lj5g3v2240980.2
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32255079 32256963 -
2 domain predictions
2 GO terms
Lj5g3v2241160.1
n.a. n.a. chr5 32333963 32352193 -
2 domain predictions
2 GO terms
Lj5g3v2241160.2
n.a. n.a. chr5 32334569 32352193 -
2 domain predictions
2 GO terms
Lj5g3v2241190.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr5 32344650 32347544 +
2 domain predictions
2 GO terms
Lj5g3v2241200.1
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32346198 32349493 +
2 domain predictions
2 GO terms
Lj5g3v2298220.1
n.a. serine/threonine protein kinase [Glycine max] gi|223452408|gb|ACM89531.1| chr5 33952081 33956878 -
2 domain predictions
2 GO terms
Lj6g3v1164000.1
n.a. PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310-like [Glycine max] gi|356532800|ref|XP_003534958.1| chr6 14237097 14242577 +
2 domain predictions
2 GO terms
LotjaGi1g1v0066400.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|G7K7I9|G7K7I9_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0066400 LjG1.1_chr1 9162776 9166796 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.1
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68157790 68162138 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.2
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|G7KWA4|G7KWA4_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68160458 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.3
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68161038 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.4
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68161038 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.5
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68161038 -
2 domain predictions
2 GO terms
LotjaGi1g1v0417200.1
n.a. Receptor-like protein kinase; TAIR: AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|O64825|LYK4_ARATH LysM domain receptor-like kinase 4; TrEMBL-Plants: tr|A0A0B2PYX6|A0A0B2PYX6_GLYSO Leucine-rich repeat receptor protein kinase EXS; Found in the gene: LotjaGi1g1v0417200 LjG1.1_chr1 91121432 91124077 -
2 domain predictions
2 GO terms
LotjaGi1g1v0493800.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0493800 LjG1.1_chr1 100758040 100770201 -
2 domain predictions
2 GO terms
LotjaGi1g1v0493800.2
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0493800 LjG1.1_chr1 100758201 100770201 -
2 domain predictions
2 GO terms
LotjaGi1g1v0493800.3
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0493800 LjG1.1_chr1 100758213 100769902 -
2 domain predictions
2 GO terms
LotjaGi1g1v0494700.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0494700 LjG1.1_chr1 100877816 100881956 +
2 domain predictions
2 GO terms
LotjaGi1g1v0501100.1
n.a. Receptor protein kinase, putative; TAIR: AT1G35710.1 kinase family with leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710; TrEMBL-Plants: tr|A0A151UBJ2|A0A151UBJ2_CAJCA Putative LRR receptor-like serine/threonine-protein kinase At4g08850; Found in the gene: LotjaGi1g1v0501100 LjG1.1_chr1 101776378 101777504 +
2 domain predictions
2 GO terms
LotjaGi1g1v0501300.1
n.a. Receptor protein kinase, putative; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|A0A0L9U250|A0A0L9U250_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0501300 LjG1.1_chr1 101799963 101806145 +
2 domain predictions
2 GO terms
LotjaGi1g1v0501800.1
n.a. Receptor protein kinase, putative; TAIR: AT1G35710.1 kinase family with leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710; TrEMBL-Plants: tr|A0A072U708|A0A072U708_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0501800 LjG1.1_chr1 101871253 101874667 +
2 domain predictions
2 GO terms
LotjaGi1g1v0719100.1
n.a. Receptor-like kinase; TAIR: AT2G41820.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|O22938|PXC3_ARATH Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3; TrEMBL-Plants: tr|A0A0B2R2S9|A0A0B2R2S9_GLYSO Leucine-rich repeat receptor-like tyrosine-protein kinase; Found in the gene: LotjaGi1g1v0719100 LjG1.1_chr1 128939781 128944952 +
2 domain predictions
2 GO terms