Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008266
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 103 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 6.042s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1828350.1
LjNfr5 Nod-factor receptor 5 [Lotus japonicus] gi|37651074|emb|CAE02597.1| chr2 27399749 27402036 -
2 domain predictions
2 GO terms
Lj0g3v0001859.1
n.a. Receptor kinase [Medicago truncatula] gi|357501751|ref|XP_003621164.1| chr0 548278 551234 +
2 domain predictions
2 GO terms
Lj0g3v0122779.1
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr0 54895363 54896700 +
2 domain predictions
2 GO terms
Lj0g3v0133279.1
n.a. n.a. chr0 60952903 60954633 +
2 domain predictions
2 GO terms
Lj0g3v0196449.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 95785653 95786482 -
2 domain predictions
2 GO terms
Lj0g3v0266969.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 138344724 138346275 -
2 domain predictions
2 GO terms
Lj0g3v0282649.2
n.a. n.a. chr0 146544935 146547381 -
2 domain predictions
2 GO terms
Lj0g3v0282659.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 146545606 146547150 +
2 domain predictions
2 GO terms
Lj0g3v0284579.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 147661718 147663469 -
2 domain predictions
2 GO terms
Lj0g3v0306109.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr0 159627112 159629719 -
2 domain predictions
2 GO terms
Lj1g3v2612680.1
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr1 30322942 30328402 -
2 domain predictions
2 GO terms
Lj1g3v2612680.2
n.a. PREDICTED: TP53-regulating kinase-like isoform X1 [Cicer arietinum] gi|502129523|ref|XP_004500333.1| chr1 30322942 30328402 -
2 domain predictions
2 GO terms
Lj1g3v4252300.1
n.a. PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Glycine max] gi|356572038|ref|XP_003554177.1| chr1 50206855 50211185 +
2 domain predictions
2 GO terms
Lj1g3v4372190.1
n.a. PREDICTED: probable protein kinase At2g41970-like [Glycine max] gi|356570526|ref|XP_003553436.1| chr1 51216368 51219959 +
2 domain predictions
2 GO terms
Lj2g3v0911680.1
n.a. protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1| chr2 13863957 13869308 +
2 domain predictions
2 GO terms
Lj2g3v0911680.2
n.a. protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1| chr2 13865146 13869308 +
2 domain predictions
2 GO terms
Lj2g3v2879660.1
n.a. DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|357493253|ref|XP_003616915.1| chr2 37548182 37548798 +
2 domain predictions
2 GO terms
Lj3g3v0303780.1
n.a. PREDICTED: LOW QUALITY PROTEIN: inactive protein kinase SELMODRAFT_444075-like [Glycine max] gi|356550454|ref|XP_003543602.1| chr3 2207888 2214202 +
2 domain predictions
2 GO terms
Lj3g3v2319420.1
n.a. Mitogen-activated protein kinase HOG1 [Medicago truncatula] gi|357513579|ref|XP_003627078.1| chr3 28948302 28952424 -
2 domain predictions
2 GO terms
Lj3g3v3312860.1
n.a. PREDICTED: probable serine/threonine-protein kinase GCN2-like [Cicer arietinum] gi|502148953|ref|XP_004507335.1| chr3 40392865 40412775 +
2 domain predictions
2 GO terms
Lj4g3v0912430.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490576|dbj|BAI79275.1| chr4 13596272 13598047 +
2 domain predictions
2 GO terms
Lj4g3v0912440.1
n.a. n.a. chr4 13596317 13598047 +
2 domain predictions
2 GO terms
Lj4g3v1345800.1
n.a. PREDICTED: PTI1-like tyrosine-protein kinase 3-like isoform X1 [Cicer arietinum] gi|502121621|ref|XP_004497390.1| chr4 21124862 21128398 -
2 domain predictions
2 GO terms
Lj4g3v3016320.1
n.a. protein kinase family protein [Glycine max] gi|351724979|ref|NP_001235029.1| chr4 40440165 40445098 -
2 domain predictions
2 GO terms
Lj5g3v0070850.1
n.a. PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cicer arietinum] gi|502125896|ref|XP_004499107.1| chr5 364817 370753 +
2 domain predictions
2 GO terms
Lj5g3v0070850.2
n.a. PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Cicer arietinum] gi|502125896|ref|XP_004499107.1| chr5 364817 370753 +
2 domain predictions
2 GO terms
Lj5g3v2240970.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439027|ref|XP_003589790.1| chr5 32249647 32253382 -
2 domain predictions
2 GO terms
Lj5g3v2240980.1
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32255079 32256963 -
2 domain predictions
2 GO terms
Lj5g3v2240980.2
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32255079 32256963 -
2 domain predictions
2 GO terms
Lj5g3v2241160.1
n.a. n.a. chr5 32333963 32352193 -
2 domain predictions
2 GO terms
Lj5g3v2241160.2
n.a. n.a. chr5 32334569 32352193 -
2 domain predictions
2 GO terms
Lj5g3v2241190.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr5 32344650 32347544 +
2 domain predictions
2 GO terms
Lj5g3v2241200.1
n.a. Leucine-rich repeat family protein / protein kinase family protein [Medicago truncatula] gi|357438999|ref|XP_003589776.1| chr5 32346198 32349493 +
2 domain predictions
2 GO terms
Lj5g3v2298220.1
n.a. serine/threonine protein kinase [Glycine max] gi|223452408|gb|ACM89531.1| chr5 33952081 33956878 -
2 domain predictions
2 GO terms
Lj6g3v1164000.1
n.a. PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310-like [Glycine max] gi|356532800|ref|XP_003534958.1| chr6 14237097 14242577 +
2 domain predictions
2 GO terms
LotjaGi1g1v0066400.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|G7K7I9|G7K7I9_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0066400 LjG1.1_chr1 9162776 9166796 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.1
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68157790 68162138 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.2
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|G7KWA4|G7KWA4_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68160458 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.3
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68161038 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.4
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68161038 -
2 domain predictions
2 GO terms
LotjaGi1g1v0278700.5
n.a. Kinase family protein; TAIR: AT2G41970.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93749|Y2197_ARATH Probable protein kinase At2g41970; TrEMBL-Plants: tr|I1N9B1|I1N9B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0278700 LjG1.1_chr1 68158871 68161038 -
2 domain predictions
2 GO terms
LotjaGi1g1v0417200.1
n.a. Receptor-like protein kinase; TAIR: AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|O64825|LYK4_ARATH LysM domain receptor-like kinase 4; TrEMBL-Plants: tr|A0A0B2PYX6|A0A0B2PYX6_GLYSO Leucine-rich repeat receptor protein kinase EXS; Found in the gene: LotjaGi1g1v0417200 LjG1.1_chr1 91121432 91124077 -
2 domain predictions
2 GO terms
LotjaGi1g1v0493800.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0493800 LjG1.1_chr1 100758040 100770201 -
2 domain predictions
2 GO terms
LotjaGi1g1v0493800.2
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0493800 LjG1.1_chr1 100758201 100770201 -
2 domain predictions
2 GO terms
LotjaGi1g1v0493800.3
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0493800 LjG1.1_chr1 100758213 100769902 -
2 domain predictions
2 GO terms
LotjaGi1g1v0494700.1
n.a. Receptor protein kinase-like protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|V7B287|V7B287_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0494700 LjG1.1_chr1 100877816 100881956 +
2 domain predictions
2 GO terms
LotjaGi1g1v0501100.1
n.a. Receptor protein kinase, putative; TAIR: AT1G35710.1 kinase family with leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710; TrEMBL-Plants: tr|A0A151UBJ2|A0A151UBJ2_CAJCA Putative LRR receptor-like serine/threonine-protein kinase At4g08850; Found in the gene: LotjaGi1g1v0501100 LjG1.1_chr1 101776378 101777504 +
2 domain predictions
2 GO terms
LotjaGi1g1v0501300.1
n.a. Receptor protein kinase, putative; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|A0A0L9U250|A0A0L9U250_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0501300 LjG1.1_chr1 101799963 101806145 +
2 domain predictions
2 GO terms
LotjaGi1g1v0501800.1
n.a. Receptor protein kinase, putative; TAIR: AT1G35710.1 kinase family with leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710; TrEMBL-Plants: tr|A0A072U708|A0A072U708_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0501800 LjG1.1_chr1 101871253 101874667 +
2 domain predictions
2 GO terms
LotjaGi1g1v0719100.1
n.a. Receptor-like kinase; TAIR: AT2G41820.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|O22938|PXC3_ARATH Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3; TrEMBL-Plants: tr|A0A0B2R2S9|A0A0B2R2S9_GLYSO Leucine-rich repeat receptor-like tyrosine-protein kinase; Found in the gene: LotjaGi1g1v0719100 LjG1.1_chr1 128939781 128944952 +
2 domain predictions
2 GO terms