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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0241500 |
| Transcript ID | LotjaGi2g1v0241500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT5G14550.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q8TXF7|ACDA1_METKA Acetyl-CoA decarbonylase/synthase complex subunit alpha 1; TrEMBL-Plants: tr|I1K1L1|I1K1L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0241500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:70383888..70390802) extracted from Lotus japonicus Gifu genome v1.2.
TAACAAACTGCTAATCATTAGTTTGTCACAAACAACCTTCCATTAGGTACTACTCCCCAATCCAACACCTACTCTAAACA CAAAACAAAAGCCACACTACAAATTTCACCAAATCACAGTGCACACTTCAATATGACAGAAAACAAAGTCTCAATATTTT ATAAACAAAGCCTCAAAAACTCACAAATCCCAATCATATTACAAAGCATTTTACTCACCTTCTTCACACGCAACCAGAAA AAATAAAGCTAGCAACTTTACTACTTCCCAACTGAGGTATAATAACAAGGTGAAGATACTCATCACTTTTCATACCCAAA ACCCAACACAAAACAAATACAAAACCTTAATACACACACTACACACTATAACTCACTCACCCTCTTTCCCTTATTGTAGG AATTCACAAGATTCTGAAAGCTTCTTGCTCATAGCATCACAAGAACCTTGCTTTCTTTCATTTTGGCTCATTTTACCTCT TGGGGAGCTTGTATTGCTTTCTGGGGTAGTGTATATTTTCCATGAATTAGCTCAAGTTTCCATGGAAAGTCTTAAGTGAT TGTTTTGAGATTGTTGGGGCACCATGGATCTGGTTGGATCTTCAGCTTCTGAGTCCTATCCAATTGAAGGCTAAAGTTTC ATTTTTTATGGTGTGATTTAGCTGCTGAATCAGTTGGAAATGGTGGGTCAGTTCTAGCTGAAAAAGGGTTGGTCTAGAAT ATGAAGAAGAAGGTGATTCAGCAGAAATCTCAGCATAAATGGAAGAAGAAGCTTTTTGTTTTGATGTTGGTGGTACTTTG TTTTGGAAGTTTGTTGTTTATGCAGATGCGGTTCACTCATGTTGCGGGGTTGGTTTCATTGCAACACAAATTTGCTTCTA AATCTCAAGCTCAGGGGCCCAAGATTGCGTTTCTCTTCATTGCACGGAATAGGCTTCCTTTAGAAATGGTTTGGGATGCA TTTTTCCGGGTACATTTTATTTTCTTTCCATTATTATTCATTTTTATTTGTTTGTGTGTGTGTTTTGGACTAAGTAAATA GTAGGAGGCTAAAATAGGATGCACCAATTGTGGTAAGTTTCAACATAATGATTCATTGGAGCCCATGTTTTAATTTTTTT TCACAATTTAGAACTTGTGACACTTTGGACTAGTATTGTATAATTCTTGGGAGAGGCTTTGTTCCTGGTAATATGTTGAA TGTTACTTGAATGCACTGTTGAGAATAACTGATGCTGTTTTAATTCATGATTTGCATTTAGCAAACTTTTATTGCCCTCT TCTTATATGGCATTGGTTTAGGCCTTGATGTTTGAGAAGCTTAACTATATAGTTGTTGTAAAACCAAATAGTAGTTCTGA AGTAGTCATCTTGCTTTTTTCTGAAGAGCTTAAATGTGTGTGCAAGGAGTCCTATCAGAAAGAAAAACCTTTATTTGTTC ATTTTAAAATTTACATTGTCAAGTGCTTTGGGAATGAACAGAAAGATATTACTAAGGCAAGCATATATGATATAACCAAA ACCGATCATCTCATCATGCTCAAGCATCTTTCTCTAGAAACATCGGACTATTCTAGACTTCTAGTGCTCCTAGATAGTAA AGTAACTGCTTATCAAAAAAAAAATGATAGTAAACTTACTCATCTATACCAGGATACTAAAGTCAAGTCGCTCCACTGTA ATGTTGATTTTAGTAAGAGCAGTTATTTATCTCTGCTTGCCATGACAAATTTTTTCTTAATTAAATTTAAGTTTTCGTTA CTTATTAAAATTGATGCTAATAGGCCCACCTCTGGCTAAATTAGTTGTTCACTTGTTTGAATTATTCTCTCGTATTCCCT GCACCCAGTAGCAAAATCATTCTTTTGTAGTTGTAGACCTTGCCATTAATGTTTTGATTATGGACATTATACATATTATT AAATTTTTAGAATGCTTCTTGTTTACTATTGACGAACAGAAATGCTTACAGAAACCTTTGTGCTGTTCCTTTAGGGTGGC AATGGAAAATTCTCAATTTTTGTCCATCCGAGACCAGGATTTCTGTTGAACAAGGCAACAACTAGATCAACATATTTTTT GGATCGTCAAGTTAATGATAGTATACAGGTTGCTGTTCTTTCTCCGTTTTCAACAAAAACTTTTTGTTATCATCCATGTT CCATTTGGTCTCTTATGTGTTGCTCAAATTTATAACTTAGTACCTTAACTTAATGTGCTTAGCTTAGAGCTTGCTCACTG CTTATGTTTTAGCTACACTCTTTTGTGGATACAAGTTTGCTCCAACTATGAAGTTTTGAAATATATTTTCTTTCTCTTTG GGGCACACATGGGAGTTGTACATTGCCTTTTATGATCAAATTTTCTCCTGTGTGTGTATTTATGAATCAGAAAACATGGT AAATTTAGTTACTGGAAAATTTGTCTTCCCAATGTCCTCTCATAGATGAAAAGAAGTAATTGTTCCTTTTGCTCCCTTTC TCTACTGCAGCTTTAACTCAAGGATGGATTCAATGATGGTTCAAATTAAAAGGATTTATGAGTAATGAGCGTTTCTTCTG TTATGCACGAGTTGTAAAGCAATTTGGTTAAGATAGCGAGTGTACCTTAGCTAATACATGATTTCTTATAAAAATGTTAA GGCTTAACTCTTTAACTATGGATAGAACTAAATATTCTAGATCTCTAAGTATCCTCATTCAAGAATTTATCTTTTGATGG CTTACATGCTCAGAACTGTATCTTATTTCTTTTCTTCCAAAGAAAGGATTGGTGATTAAGATATCTGATAGGAATTGTCG TACTGTGCTTTTCAAGTGGATAACTCAGAGTTTTTAACTTCAAAGATTGACTACCTCAGTTCAGCAAATGCAATTCATAG CACATGAATCTTTTAAAAAATTAGGAATTTAGGAAACATATCTTCACTGCTGGCATAGAATCCTTAATTAGTACTTTTTA TCTTTGCAAGAGATTTTGTCCTTGTATCATTTAATAGTTTATTTCTGTCATCTCAAAGAGCATTGTGAACTATTTGTCTA TAATAATATCTAAAAATGATTGAAAATATCTACTTATCACAAGCTTCCATGTCATTAGAAAAAAAACCTGACAACCTCTC TTTCATTGTTTCTCTAAAGTGAACTTTGAATTATATTATTCAACTTTGCCAAAATGTCTGCAAATAGTTCTTACAAGGCT GTAATCCGACCTTGTTATATTTATCAGCTTCATGATATTAGTCCATGCTATCATTTTCAGGTAGATTGGGGAGAAGCAAG CATGATAGAGGCTGAGCGCATTTTACTTAGACATGCGCTTACTGATCCTTTAAATGACCGTTTTGTTTTCCTCTCAGATA GGTGAGGGTATAATTTTGCTAACATCTACAGAGTCTTAATCATTATACTTTCCATGAACTAACTATGCAAAAATTTAAAC TGTTCGGTGAACATATTAATGATTTTATATTATATTCCTTACATGCCACCAGTCCTTTGGCTTGATGTGTGAGCAATGCA TTGACCCACATACCATGTACTGAAATTCAATTTTGTTTTTATTTAGAAGTATAGGGGTGGTAGGGATCGAAGTCTATGCA ACTTGGTCTTAGAGGCTCTAATAATGTGTTATAAACAACTTCTATGAGAAGTTTAAGCAGTTGGATGAAAACACATGAAT GATTTTATATTATATTCCAACTATACTTTTCCAAATTTTCCTATAATTGTCTGGACTTAAAACTATAAATACTCACCCCT AACATACAGTTCTAGAAGTAATTATTTCTATTGATTGTATTTCAATTTGCTTAATTATTTGATAGAAGAATGGTGTGGAT ATTTCTCTATTCTTGAGCCTAGGGCCTCACTATATTTCAGTTGATTGATCTCTTTTCAGCTGTATACCTTTATACAACTT CAGCTACACCTATGACTACATCATGTCTACATCAACTAGTTTTGTTGACAGGTGAGGATACATAATTATCTATGCTTTAG CACATTCGGTCTGGATGGAACTGACTTTGTTTGAGGAAGATTTCAACAGAACTGACTTAGTTTACAAAAACTTAATTACC AACTAACTTAGTTTTTTTTTTAACGTACACGTGTAGTTTTATTTATTTAGTTGCCAGCAATTTAATTGTTACAATTTTCC CATTAAATTAAATGCAGCTTTGCTGACACAAAAGATGGTCGTTACAATCCAAAAATGGATCCAGTTATTCCTGTTTATAA CTGGAGAAAAGGATCTCAGGTAAGAGTCTAATGTAGTGCTTAGTTCACCATAAGTTCAGTCTGAAACTTAAAATATATGA CATGGACATGCACTGCCAAAGAATACCATCTTATTCCTGTCTATTTATGTAATCTCCTACAGTGGGCTGTTCTGACTAGG AAGCATGCCAAGGTTGTAGTGGAGGATGAAACCATCCTTCCTATGTTTCAAAAATATTGCAAGGTAATGGATAACATGGT TCATTGATACATATATAATCTGTCTTTTTACTAGTGGAATCACAATCTTAAATCTTATCAACATTGCAGAAAAAGCCACT ACCAGAATTTTGGAGGGATCATCCCATTGTAAGTGCTCAATACATGAAATTACTATCTAAATATATCCTCTTTTTACAAA ATTAGCTGCAAGGAGTTGTTTTTTTTTTTTTCTTATTCTTTTTAATGAAATCATGTCTCTTCTGCTCAGAAAAATGTCAT GAAGTAATGCAATATTTGATTGTGAAATGATACATGATGTCAAGTAGCTTCTTGCAAATTATGTAAAACCAATTTTAAGT ATAACTCCTTCCATCTTGCAGCCTGCTGACACGTCTAAGATTCATAACTGTATACCAGATGAACACTATGTTCAAACATT ACTGGCTGTAAGGATCTTTTCTCAACCTCCCTCTCACTCTTTCTTTCTGCGGTGTGTTTGAAACAGTCTTCATGTGCATC AGACAGATATCCTGTATATCTTGCGGTGGTTCGTCAGTTAACAATTACCATATTAATCATGTATTTTACTGAACATTTTG TTATGGCTTAATTTATTATACTGAGGATTTGACATCAAGAAGAAACTAATGTTCTATACTTCTACCTTTTTGTACTGGAA TTATTTGGGTTTAGGTTGAAAATTGTCTGGCACTGTTATTGGATATTTTAAACATTTAATGGAATATACAATTGCATTTC TTTGAAGTAACTTTGTCACATCTACTTTAAATTTTGTGATGTGGCTTGTTTAATTTTACTAATATTTAAATACCATCATC ATGCTGGTTTTAACTTACCTTTTTTTATGTGTATTTTCCTTTCCAAATCTAGCAAAAAGGTCTTGAAGCTGAAATCACAC GAAGATCGGTGACACACACTGCCTGGGATATTTCCAACTCCAAGGATCGTCAGCGCCAGGGATGGCATCCAGTGACTTAC AAATTCTCAGATGCTACCCCTATGCTTATAAAATCTATAAAGGTTCAAACTCTGCTAAACTGCCTTAGTAAAATCACTTT TACTTTCTTTCTATGATTACTTCAGTACATTCAAAACAAAAGTATAAGGGTAGAGATTTTGCTTGGTTATTGACTAATTA AAAGATGCTACAGATGGTAATATTAGTAACCCCTGGCCTAAAGATGAATTCAAACAATTAAATACATAACCTACTACACA TCAGCGTATCACAAACTTAATTAGGTATTAGATTTTTGTTACCTATTTACGATATCCTCACCATTGAAAAACCTGAATCT TAATTTAAGATCCTATAAGCCAGCTAATGAAGTCAATACCTTAGAAGAGCAATTCGTTTATCATATATAACCCATCCACA ACAAAGAGGGCTAAAACATTGACCAAAATATTCAAGCAACTGCACAATTATCAGTAGTCTCAGTTTATGCAAATGAGCTC AATATGCAATAAAACTCAATGTATGTGCTAGTCTGCAGGAATGTGAAGATTGAGAAGGAAAAATTTACATATCATTGAGC CACGATTGAATCAGTTTATGACAAGCATATAAAGTGCATGTGTTCTATTTTCATGAAAGAAAATATGTAAAAGTTTAATG ATTTGTTTGCAGGAAATAGATAATATTTATTACGAGACCGAATACCGAAGAGAATGGTGCACCAGCAAGGGAAAACCATC TACTTGCTTTCTTTTTGCTAGAAAATTTACACGAACTGCTGCTTTACGAATTCTTAACATGGTAAGTTCATATACTACAT TTTTCTTGAAGAGTAATAGTGAGCTTTCAAATATATTTTTGGGGTAAACTGGAATCTTGAGTTTCTTCTATTTGAGCATT ACAAGTCTAGCTTATAATTATTTTCTGCTTTGCATTGGACAGTCTGTTTTGGGAGATTTGAGTTAAGAGAACAAAATGCT CATTGCCAGCGGCTGATACAAGCAGAAAATGTTGTTAGTAAAGGAATAAGAGGAAGGAAAGAAGATAAAGTAAACGCAGT TGGGGAATATTGACGACCACACTGATATGTATAATGGGATTGTATATTTAGAAAGTTAATAGTGTATGAGGTGTATATGT ATTATATATGCACTAATTTGTTTTTTCAAAATAATACTTGTAACTGGTGGATCATGCAAAAGAGTTCTTATAATAAAAAA AGACAGTATGAGCATGACCAGTGTCAGTTTTTTTTTCCCTGTTTAAACCACATGTATCATTAGAGGAAATTTTGTTGGAG CCGGATATGGCCGCTGTGGACAAAACTCTCATCACAATGTATTTAACGCAACTGTTTTCACATGACTCAAACACGAGACT TTTTTGTTGTGTCTGTTGAAGGTCCAACAACTAGTTGTGTGTAGACTCACCTTGTACCATGTAGGCACAATTTTCAACTG AAGGTAAACACTATGATTTTTGGGCTATAAAGTGG
CDS sequence (LotjaGi2g1v0241500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGAAGGTGATTCAGCAGAAATCTCAGCATAAATGGAAGAAGAAGCTTTTTGTTTTGATGTTGGTGGTACTTTG TTTTGGAAGTTTGTTGTTTATGCAGATGCGGTTCACTCATGTTGCGGGGTTGGTTTCATTGCAACACAAATTTGCTTCTA AATCTCAAGCTCAGGGGCCCAAGATTGCGTTTCTCTTCATTGCACGGAATAGGCTTCCTTTAGAAATGGTTTGGGATGCA TTTTTCCGGGGTGGCAATGGAAAATTCTCAATTTTTGTCCATCCGAGACCAGGATTTCTGTTGAACAAGGCAACAACTAG ATCAACATATTTTTTGGATCGTCAAGTTAATGATAGTATACAGGTAGATTGGGGAGAAGCAAGCATGATAGAGGCTGAGC GCATTTTACTTAGACATGCGCTTACTGATCCTTTAAATGACCGTTTTGTTTTCCTCTCAGATAGCTGTATACCTTTATAC AACTTCAGCTACACCTATGACTACATCATGTCTACATCAACTAGTTTTGTTGACAGCTTTGCTGACACAAAAGATGGTCG TTACAATCCAAAAATGGATCCAGTTATTCCTGTTTATAACTGGAGAAAAGGATCTCAGTGGGCTGTTCTGACTAGGAAGC ATGCCAAGGTTGTAGTGGAGGATGAAACCATCCTTCCTATGTTTCAAAAATATTGCAAGAAAAAGCCACTACCAGAATTT TGGAGGGATCATCCCATTCCTGCTGACACGTCTAAGATTCATAACTGTATACCAGATGAACACTATGTTCAAACATTACT GGCTCAAAAAGGTCTTGAAGCTGAAATCACACGAAGATCGGTGACACACACTGCCTGGGATATTTCCAACTCCAAGGATC GTCAGCGCCAGGGATGGCATCCAGTGACTTACAAATTCTCAGATGCTACCCCTATGCTTATAAAATCTATAAAGGAAATA GATAATATTTATTACGAGACCGAATACCGAAGAGAATGGTGCACCAGCAAGGGAAAACCATCTACTTGCTTTCTTTTTGC TAGAAAATTTACACGAACTGCTGCTTTACGAATTCTTAACATGTCTGTTTTGGGAGATTTGAGTTAA
Protein sequence (LotjaGi2g1v0241500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKKVIQQKSQHKWKKKLFVLMLVVLCFGSLLFMQMRFTHVAGLVSLQHKFASKSQAQGPKIAFLFIARNRLPLEMVWDA FFRGGNGKFSIFVHPRPGFLLNKATTRSTYFLDRQVNDSIQVDWGEASMIEAERILLRHALTDPLNDRFVFLSDSCIPLY NFSYTYDYIMSTSTSFVDSFADTKDGRYNPKMDPVIPVYNWRKGSQWAVLTRKHAKVVVEDETILPMFQKYCKKKPLPEF WRDHPIPADTSKIHNCIPDEHYVQTLLAQKGLEAEITRRSVTHTAWDISNSKDRQRQGWHPVTYKFSDATPMLIKSIKEI DNIYYETEYRREWCTSKGKPSTCFLFARKFTRTAALRILNMSVLGDLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 47 | 47 | - | – | |
| PANTHER | 7 | 361 | 355 | 2.7E-169 | – | |
| PANTHER | 7 | 361 | 355 | 2.7E-169 | – | |
| Phobius | 18 | 29 | 12 | - | – | |
| TMHMM | 19 | 41 | 23 | - | – | |
| Phobius | 30 | 47 | 18 | - | – | |
| Phobius | 48 | 368 | 321 | - | – | |
| Pfam | 62 | 318 | 257 | 2.3E-79 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0241500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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