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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0244800 |
| Transcript ID | LotjaGi2g1v0244800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress protein A-like protein; TAIR: AT5G14680.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3S8G1|I3S8G1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0244800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:70944640..70947185) extracted from Lotus japonicus Gifu genome v1.2.
AGGGATTGTGGTATCATGCGCGCGGGGTCGCGGGGATATAAATACGCTCTAGTGTTCACGCCGTTCAAAACTCAAAAATC AAAACAGAGCGAGCGAGTTAGTTTGACTCGGGAGAATCGACTCAGTGAGTGATGGCGAGTGTGACTCGGATAATGCTGGG AGTGAACGAGTCAAGCTTGAAGGGTTACCCTCACCCTTCCATTAGCAGCAAAGGCGCTTTCGAGTGGACCATCAACAAGA TCGTTCGCAACAACGTCACTGCTTTCAACCTTCTCTTTGTCCATGTTCAAGTTCCTGATGAAGATGGTGCGTTCTTCATC TCTCGCTTTCGTTTGTTTTACGATTTGAGTGTTTTTTAGTTCAATTTAATATTCGTATTTGAATTCTCCTATGAAAATGG TGCAATTGAAAACCTGGAATTTCTGTTATGGGTTCGAATGATTGAAATTGGTTAATTGAGTTGAAGCGTATTTGCTTCTT GAATGATTGGTTATGCCGTGTTTGGAATATTCAAATTCGTTATTGTTTGTACAAGGTAACGAGAGATATACAAATTTTAA GAGAAACTTTCTCTTGGTAACTAACTGTATATAGGATTTGAAGCTTATTTTGAGAGCATAGGCATGAGATGATCCATGTG AGAATGATGACATTGTGCAGATAGAGTTTGTCTGGTGTGAATGTGATTATGGCCCTGTTTGGAAGAGATTATCTGATAGC ATAAGCTCTTATGCCAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGCCCTACTATAAGTTGTTTTGAGCTTATTTTCA TAAGCTACTCAAGATAGCTTATTAAAAAGAGCTTATGCTTATATATAGCTTATTTTTTATTTATTTCAATAAAAAATTTA AAATAGCTTATGAATAAGCGCTTATGGTCCATAAGTGCTTAATTAAGCTGTATTTTCAAGCAGGGCCTATCATTGTTATG AATATATAGCTTTTTTAGTCTTTGAAGCTGCAAATAATAACATGACCTGACTTGGAGAATTTATTGACCCTTTGTCTAGA AACTTCTAAGGGGAAGTATGTCTATTTCAGATAAGATGCTCTCATGTGAAATATTCTCTCATGTTGCCTCATATTGAAAC TTTGTGTTTGTGTGTCTCTCTCATACATACCTAATAGGTATAGGTTTACATAGGTATAGATGTGACCCTTTATATGTTTA TGAAGATAGAGATAGACACATTGTTTTACTTGATAGTCTAGTGTGACATTAGAGGATCCCAATCTGTACATTTCTCTGTT AAAAGCTTGTTATCATGTTAGGTAACAGCCTACCTTGGCTGATTGACCCTGCAGCTAATCTATTGAGGCATTTATAGATT TAGGGTCACTAACTTTAGTCTTTGAAAAAATGTAATTACCATGCACAAGTGCAAACGAATATTAGCATATGCACTATATA CAATAAGTGAATGAAACTCTTCTTATGAATTGTGATGAAAATTCATTCACGTTACGGCCAACTTGTATCCAAATACACCC TAAATTTGTTGCTTTATAGGACAGAAATGTTGATTTGTATAAGACTAAAATGAATCACCTCAAATCTTTAAAGATAGAAA GGAATATTTCCTCTAAAAGAAACTACAATCTAATGGCAGTTCTTGTTTTCTATTTCTGCTAGGTTATGATGACATGGATA GCATCTATGCTACAGCTGAAGATTTTAAGAACATGAAGGAGAGAGAAAGAATTAGAGGGATTCATCTTCTGGAATACTTT ATCAAGAGGTGTAATGAAATTGGGGTAATAGTTTTTCTGTTCTATGTCTACATGCTCTATCCCTTCCTCCTCTTTTCTTG TGGCTTTCATTACCTCCTTTCTGATTAGGTTTAGAAGTTTCTATTCTGTCTTCCCAGTGATTTGTAAAGTACCCTCTCTT ACAAGATTGAACACATATATATTTGTAGGTGGCATGTCAAGGATGGATAAGGCATGGTGATCCCAAAGAAGTAATCTGTC ATGAGGTGAAACGACAACGACCAGATTTTCTAATTGTGGGCAGCAGAGGTCTTGGGCCTTTCCAAAAGTATGCATCTGTT CACTTTCTCTGTTAATTGCTTGAAATTTAAGATTTGCACATTTAATTTACCCTTCAAATATGTTGCTAAGGTATTCTGGT GAATCGTGATGTGTAGGGTTTTTGTTGGCACTGTTAGCGAATTCTGCTGGAAGCATGCTGAATGCCCTGTCCTTTCTATC AAACGCACTGCTGATGAAACTCCACAGGACCCTGTTGATGATTGATATTTGGCTATGCACAGGAGGTTGGGGATAGATTC CCTATGTTGGTTGTTGAACTAAGAAAAATAAATAAAATTTGAATGTGATTAAGACTAGTCGATATGGAGATTGTAAGACC CTTATTTTATTAGTATGATTATTATTATTTGAGATGAATAATAATTGTGAAATTCTAGTGAAGAATGTGTTTGTTTGATT GATGACGTATGTGGAATTTATTATTTTGAGATGAATGAGATTGAGTTTTATTATAAAAGAAGAGGG
CDS sequence (LotjaGi2g1v0244800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGTGTGACTCGGATAATGCTGGGAGTGAACGAGTCAAGCTTGAAGGGTTACCCTCACCCTTCCATTAGCAGCAA AGGCGCTTTCGAGTGGACCATCAACAAGATCGTTCGCAACAACGTCACTGCTTTCAACCTTCTCTTTGTCCATGTTCAAG TTCCTGATGAAGATGGTTATGATGACATGGATAGCATCTATGCTACAGCTGAAGATTTTAAGAACATGAAGGAGAGAGAA AGAATTAGAGGGATTCATCTTCTGGAATACTTTATCAAGAGGTGTAATGAAATTGGGGTGGCATGTCAAGGATGGATAAG GCATGGTGATCCCAAAGAAGTAATCTGTCATGAGGTGAAACGACAACGACCAGATTTTCTAATTGTGGGCAGCAGAGGTC TTGGGCCTTTCCAAAAGGTTTTTGTTGGCACTGTTAGCGAATTCTGCTGGAAGCATGCTGAATGCCCTGTCCTTTCTATC AAACGCACTGCTGATGAAACTCCACAGGACCCTGTTGATGATTGA
Protein sequence (LotjaGi2g1v0244800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASVTRIMLGVNESSLKGYPHPSISSKGAFEWTINKIVRNNVTAFNLLFVHVQVPDEDGYDDMDSIYATAEDFKNMKERE RIRGIHLLEYFIKRCNEIGVACQGWIRHGDPKEVICHEVKRQRPDFLIVGSRGLGPFQKVFVGTVSEFCWKHAECPVLSI KRTADETPQDPVDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 174 | 173 | 2.8E-63 | ||
| PANTHER | 3 | 174 | 172 | 3.1E-98 | – | |
| PANTHER | 3 | 174 | 172 | 3.1E-98 | – | |
| SUPERFAMILY | 6 | 168 | 163 | 3.18E-30 | – | |
| CDD | 6 | 158 | 153 | 7.63837E-22 | – | |
| Pfam | 23 | 160 | 138 | 1.6E-17 | ||
| PRINTS | 121 | 133 | 13 | 8.7E-7 | ||
| PRINTS | 139 | 161 | 23 | 8.7E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0244800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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