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LotjaGi2g1v0245100.1

Overview

Field Value
Gene ID LotjaGi2g1v0245100
Transcript ID LotjaGi2g1v0245100.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Cinnamoyl-CoA reductase; TAIR: AT5G14700.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q0JKZ0|SNL6_ORYSJ Cinnamoyl-CoA reductase-like SNL6; TrEMBL-Plants: tr|I1N5P4|I1N5P4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0245100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:70974791..70984619) extracted from Lotus japonicus Gifu genome v1.2.

GAGCGATAGAGAGAGAGACACAGAGTCATCTATTTATAAATTCTCTCTCTCTATATATATATATATATATATAACCCTCA TTTCAACCATCTCCATACACAAACTAAGAAGAATCACAAGAAGCTTTCTCTCAGTTTAGCCCCAGAAACTCAAGCCCACA ATATATAACCCAATATTCATATATTTCACCACACAGTCACACACTTAACTAGTTTTCAATTTTTTGCTACTCAATTTCAT CTCTCATTAATTTGAAATGGGTGTTGTGCGCAAGTGGGAGAGCAGAACGGAGGAGCTGGAGGCCTTCCGCCGCCAGCTGG TGGCCGCCGCCGGTATCCACCGTAGAAAGGACGATGAGGGAAGAAGAACCACCAAAACAGTCGTTGATGATGAAGAAGAA AGGGCCTTGCTCTGTGTCACTAGTGGTGTTTCCTATTTGGGCCTTGCTCTCGTCAACCATCTTTTGCTCTTGGGTTACTC TGTTCGTATCATCATTCACAACCCAGGTAAAGGAGTTAAATTAACTCTTTTTTTCTTATTTCCCTTCTCAATTCCAAACT TCTTCTCAATTATGAATTTTGCTTAGTAGAACCATGCATTAACAATAATTTGTGAGATATGTTAGCACATGTTTGTATAC ATAGTGGAAAATAATTTAGATGAGCTAAAATCATGTTGATTTTATTTCGATGGTGAATTTTCAACCGTGTATCCATACAT TTAATTCAATTAGAACTTAGAATATAAGTTGTTGGTAGCAAATTGGCAATATAAATTTTCTTGTTGAATTAAGTTTGAAG ATTTATAAAAAAAGATGAAACTTGTAAACATTAAGTTTAGCTAGCTAGGTAGGGATGATTGGACTGAGGGTAGGGAAGGA GATTCAGGAAAATTCAGCTATACAATTTCAAAAGCTTGAGTTAGAATGGTAGTCGTTAATCTTTACTCAGATTTACTTAA AAGATTATGAGTGTAAATGTGTATAAACATTAATTATTATACTCCTATTTTTGTTATAGTTATGAAAGACTTTCTGAAGA AGATTACAATTTTCCAAGTTCCCTTCATTTAGTTTATGAGATCTGTTTGTTAAAAGAATTGGTTTATTAAACGTCATCAA CTGAAAATTGAAAATTCTACGGCATCGCGTGTGAAAGTACTGTGTATAATGGGAATTTTTCAACAAAACTAAATTTGGTT GTTATTTTCGTATATGCCAAATTATATTAATCATGTGTCGTCGAGTACAATATTGTGTATAGTTGGCAATTTGAACTCAT TGTTCACTGAGCCAATCCAATCAAATATGCCACAAAAATAGTTATTAATTCGGTCAGTCCTCCCTAGAGAATATTTTTAT ACGAGTCCTCGTGTTAATTAATTAATTATTCAAGTCTACGGTTTTGAATTATGAATCAGTCTCTTCTAATTCTATGTCCT AATTTTTCAATAGCCGCCTTATGATAATAAACTTTATATAGTTTTTAACTTTTTATGATCTTGGTTTATCCCATATATCT TTTTGGCCTGCTCACCACTCACTAGTGGTCTTTTTTTGAGTTTTACAAACTATGCAAGTAGGGCCACTACACTCATGGAT TGATATAAATTGAGTTATTATATAAGCTTGTTGTTGTTAATATTTGAACATTTTGTAGTTGTAAGTTTGAACTTTACAAA CTTAAACTTTTACATGTCATACAAAATTATTTGATGCTAATATTAGTGTCATGATTCATGTAATTTTCTTCATAATTTAA AATAATTTTTAATATCATTTTTAGTGAGTAGTGACAGCACGTATGTGCTATACATACATTCACATTTACTTGAGGTGGTG CTCAATACCAAATGGTGTGGAATAGAAAGCCACACGTCTTCATTAAAAATTGCTTTTGTCTTTATTTAAGGCAATTACCA TTGAAAGTTTTAAATTAAACCAAACAAACTATAAATGTAGTGATAAATATGCAAACATAGTCACGCAATTAACTCCTAAA AGCTTTTAGCTTAATTGAGTTTGGTATTATTATTGATGGTTTGGTATCATTATTGATGGTTATTAATTGAGAAAAGTGGC TTTTATATGCAGAGGACATAGAGAAACTGAGTGAAATGGAGCCATGTGGGACATCAGAACATAATTTGGAAGTAGTAATT GCAAACCTAACTGACATTGATAGCTTGGAGAAAGCATTTGAGGGATGTCGTGGCGTTTTTCACACCTCTGCATTTACCGA CCCTGCTGGTCTCTCTGGCTACACAGTATGTCAATTTATTTTCTCATTTAAATTATGTTTCCATTCGAGTCGATACAAGT TTAAACCGACGTTAGCGTTTACTGAGAATAATGTCCGTTCACATTGTACTCAACTGATATTAAACCGACGTTAGCGCTTA TTAAGATTAATGTCCGTTCACATTGTACTCAACTGATATCTGAACACAGACGCTTACTCTTCCAATGTGTTCATACACTC CACTGTCAAATATTTTTTTGTAATTATTTCACACCATCATTTCCCCTTTATTTATAGCACTTTTCTTTTTCTCTTGTCTC ATAGCTAGCATTATTGATCTTTGTGGTTGTACAAGAAACCATTGCATCCCAATTCCTTGCCTAAGGGAGCAAAACCCCTT CTCATGCTGCACATGCTTTGTTTATGTCATGCTGAATAATGGGGCCACTAGTACCTAAACGAAATTGAGAAACGTTTCAA TTACTTGCTCTTGTGCTTTACTTTAAGTACAAAACTTGTTATTCTAATAATAGTAGTAAATTAAAAATGATCTTTCAATT ATTGATTCCTACACGTACCTCCTCATCTAACATCAACAAGAGGGTGAAAGAAGCTAAAATTCTATTATAGCTTAATTGTT GTGACCATGATGTGATAAGAAAAAATGTAACGTGTAATACTAATTATTCAATTGCTTTTGTCTTATATTAGAAATCCATG GCTGAGATTGAAGTCAGAGTGGCAGAGAATGTGATGGAAGCATGTGCTAGTACATCTTCGGTTAAAAGATGTGTGTTCAC ATCATCACTATCAGCTTGTATGTGGCAAAATAATGCACAATCAGAAACCTCCCCTGTTATTAACCATGAATCTTGGAGTT CTGAATCATTCTGCATAGAAAAGAAGGTAAAATTCCACAAAGCAATTGCACTTGATTTATTTACTTTGTTTGTTTTGTTT TATTTGAGAACCTCTTATACAACATGTTTATCTGACCTTGCTCTTTCTTCATGGCAGCTTTGGTATGCATTAGGCAAATT GAGGGCAGAGAAGACTGCTTGGAGGATAGCTAATGAAAGGGGTTTGAAACTCACTAGCATTTGTCCAGCTCTCATCACAG GTCCTGAATTTTATCAAAGGAATCCAACAGCAACAATTGCTTACCTCAAAGGTACCATGTTACCAAAATCATTGTCCAAT TTCTTCTATCCATTTTGGGTGTGTTTGGGCAAAAAGCTTAATTAAGTGCTTATTCGTAAGCTAATATGAGAAACTTATTG AAATAAGCTGAAAATAGGTTACAGCTTGTGAAAATAAGCTTAAAACGACTTATATGTGAGCCATGAGCTATTTACATAAA CTGTCTCAAATACTTGCATAAGCGTTTATGCTAAAAGAAAAGCTCCAATAAGCTTTTCCAAACTTAGTCAAACATAGAAT CTAAACTTTTCCAAATGCTAATGCAGGAGCTCAAGAAATATATTCTAATGGTTTGCTAGCAACAGTTGATCTAAAGAAAG TGGTTGAAGCTCATTCGTCTGTATTCAAGGCAATGAACAACAATGCTTGTGGGAGATACATTTGCTTTGATAATGTGATT GGTACACAGAGTGAGGCAGAGAATTTGGCCAAGGAGATTGGTATGCCCAAAGAGAAAATATGTGGGGATGAATCTAACAA TTCATTACATAGATTTGAACTGTCAAATGAGAAGTTATGCAGACTCATGTCAAGGCCAATCAGGTGTATCAGTGAATATT AGATGAAATTATGATATAGTTCAATCAGTAAAAATTGATGACCTAAAAGGTTTATTAGTGGCATACCTTATTCTTGGGAG ATTAGAAGAGAAAATAGATTAGGTATGCTTTATAGTTCATCTTCATTCATTCTTTTTTTCTTTGTTTCTTTTTGGGCTCT AGAGAGGGTATGCCACAGGCTCTGTTCAGTAATGCTTGTATTCATTAATGATCTTATTTTATACATAATGTTATACAATT TAGTATTTGTACCAAACAATGCTAATTTGTCGATTTCGGAGTGGTTTGTTGGTGTGAAGAATCTTCACCCAACCAACAGG CCGGTCCTCGATTCCAAACTAGAGCAACGTAAAAACAATGCTAATTTTTCATTGCCTCATATCACAGTCATTGCAAGCAA TTAAAATCTACTAGTTTTCTAGCATACTGAGGTGAATTTGAAGAAAATGACTAACAAAAAGACTCTCCATACTAAACTAA ACGTAAATAACTGCAATAATTATATTGCTAATGTCAACTATAGAGAATTGATAGGGACTTAATCCACAAGCTAAAGAAAG ACTACTCTAAGGTGTACACACGCAGGGGCAAAGTGGGAACAGCCATCGATTCCACTACCACACATGGGGGAAAATAACTA ATTGATGAGCTGGCAGATCCTCTTTGCAGAGGATCAGGCCAGAAGGTGTGTATAAACACCTGAGGGGGGGAGAGAGAAAG GTAGGCATCATTTCTGTTAGAATTGGGAGAGAAGGGAACACTCTCGAATTGTTCCTAGCTTTATTGCTTTCTGTATTTTG CTTCCATTACTTCTGTATTTCCTAAGAATTTCTGGTGTTCTCATCAGAAATTCCCTATCAATATATCAGTAATTCAGTTT CTTCTTCCTAAAACCTCTGGTACCTATCATTGGTATCAGAGCTCCTGATCTAAAGGGAGCTTTGTATGGTAAATACCCGC GCGCAGATGGAGCACAGAATTGAGAACGTGGAACGAAATGTCACTGAGATGAGAACGATGGTCGACCAGCTTCACGAGCT GATGCTCCACCAAGAGCGTCGCCGGAGCAGGGGAAGATCCCACACACCCCGTCGTCGTCACCGCACTGAGAGTCGTGTTT CAGACCCATCGCTAGATGACTCTCGGAGTTCTCACTCTGTCGTCCTCCGCCACGATGACGACTCACCCAGACTACGCATC AGAACAGGAAGGAAGATAGATCTTCCTTTGTTCAACGGTGAAGATGCCCATGGCTGGATCGTTCGGGTTGAATGTTTCTT CAGCCTCAACCACATCGACGACGGCGAGAAGGTGAAGCTGCTCGTAATAGCTATGGAAGATCGCGCTCTGAATTGGTTCC AATGGTGGGAGGAGCACGCTCCAGAACGTACATGGGAGGTGTTCAAGGAAGCGTTGATTCGAAGGTTTCAACCCGAATTG GTACAGAACCCGCTTGGACCATTGTTGAGTATTAAGCAGACAGGGAGCGTAATGGAGTTCAGGGAGCGATTCGAAATGGT CGCTGCACCACTGCGACACTTGGATCGGGAAATGGTCACTGGTATCTTCCTGAATGGACTCAAGGAAGAGATTCGAGCTG AACTCAAGCTATATCCACTGGGAAACCTTGCTGAGGTTATGGACCGTGCTCTGCTCCTTGAAGAGAAAAACAGAGCAATG CGTTTGGGGAAAGGGGGTGATGAAGACAAGCGGGGATGGAAGGAGAAGGGGATGACCACTTACAGAACAGCTAATCACTG GGTGGATGGCAGTAAATGGAAGAATACGAATTCTGGAACCACGGAGACAGAGAAGAATGCTTCTGACACTAAAACAGGGG AGCAGAAACCACAAGAAAAAAAATGGACTGGTGGACAGAGGCTCACTCAAACAGAACTCAATGATCGCAGCAAGAGGGGA TTGTGTTTCAAGTGTGGGGACAAATGGAATCGGGAGCATGTGTGCAGAATGAAGCACTATCAGTTCATGCTAATAGAAAC TGGGGAAGAAGAGGAAGAGGATGAAGCGCCTTTCTATGAAGCTGAGTCAGAAGAATTGGTTATGGAACACAAGACCTTAC TCCTTTCTCTGAAGAGTAAAGAAGGAATCACCACCAGCAGATCATTCAAACTGATGGGACAGTTGGCTCTTGAAGGTATT GAGAGGACAATTCTAGTTCTCATAGATTGTGGTGCTACAAGTAACTTCATTTCACAGGGATTGGTCAATGAGCTGAAACT ACCTGTGACTGAAACAGTAGCTTATGAAGTGGAAATAGGAAATGGAGACAAAATCCAGAATCAAGGAGTTTGCAAGAACT TACCCATATTGGTACAAGGTATGCATCTAATCCAACATTACTATGTACTGGAACTTGGGGGAACAGATTTAGTGCTGGGA ATGGACTGGTTATCTAGTTTGGGAGATGTGAAAGCCAATTTTAAGAACTTAATTCTGCAATGGAAAGTTGGGGGAAGGAA GATGGTATTAAGAGGGGATCCCACTTTGAGCAGAACCCAAACTTCTTTGAAAGCTTTGTGCAAAGCCATGCACAACAAAG GAGAGGGGTTTTATTTGACTTGTGAAGACCCTATGTTAAACACCAGAGGTGAAGAGGGGATTTCAGAAGAGATGGCTGCC ATCATAGCTGAATTTCCAGAAGTCTTTCAAGACTCTCTAAGGCTTCCACCGTCAAGGAGTTGTGATCATGCTATAACCTT GAAGGAAGGAGCAACAATTCCCAATATCAGGCCCTATAGATGCCCTTATTATCAGAAGAATGAGATAGAGAAATTGGTGA GAGACATGTTACACTCAGGGGTTATCAGGACCAGCACAAGTCCCTATAGCAGTCCAGTGATCCTAGTAAAAAAAAAGGAT GGGGGTTGGAGGTTCTGTGTTGATTACAGAGCCCTAAACAAGATGACTATACCTGATAAATTCCCAATTCCTGTGATTGA GGAGTTGTTGGATGTGCTGGGGACTGCCCAAGTGTTCTCCAAATTGGATTTAAAGTCTGGATACCATCAAATTAGGATGC AAGAGCAAGACATTCCCAAAACAGCATTTAGGACACATGAGGGACACTATGAGTATGTGGTAATGCCCTTTGGGCTCACC AATGCTCCATCCACATTCCAAGCCTTAATGAATCAAGTTCTCAAGCCTTATCTCAGAAAATTTGCCCTCGTCTTCTTTGA TGACATCCTTATTTACAGCCAGGATGATGAGACTCATAAGGAGCACTTGAGACAAGTTCTGCACACTCTCAAGGAAAACC AGTTGGTGGCCAATCAGAAGAAGTGTTCACTTGGGAAGAAGCAATTGGGATACTTAGGACATATCATATCTGGACAAGGA GTGGCTGCTGACCCTAGCAAGATTCATGACATGATAGACTGGCCTATCCCCAAGGATTTGAAGAGCTTGAGGGGTTTCTT AGGATTGACTGGTTACTACAGAAAGTTTGTCAAGGGATACAGCAAAATAGCTTTTCCTTTAACTCAACTATTGAGGAAGG ACAACTTCTGTTGGGATCAAACAGCCACAGAAGCATTTGAGAAATTGAAGATTGCTATGACTACCCTACCAGTTCTAGTG GCTCCCAACTTTGACAAGCAATTTGTGGTTGAGGCTGATGCTTCTAGCAAAGGGATTGGGGCTGTCCTTATGCAGGAAGG AAGACCCGTGGCTTACATGAGCAAGGTTCTGTCAGACAGAAACCAAAACAAGTCTGTCTTTGAAAGGGAACTCATGGCTA TTGTACTAGCTGTCCAAAAGTGGAGACCCTACTTGCTAGGAAGAAGTTTTGTGATCCACACAGATCAAATGAGCCTCAAA TACTTGACTGAACAGAGAATTATAGGTGAAGATCAGCAGAAATGGATTACTAAGCTAATAGGATACAATTTCACAATTAA ATACAAGCCTGGAATTGAGAATAAAGTTGCAGATGCTCTCTCAAGGAAGTTTAATTTCTCTGCTATCTCTGTAGCTCAAT GTCAAGAGTGGGAGGGATTAGATGAAGAATTGATTCAGGATGCCAAGTATGGTCGAATGATCAAAGCTCTCATGACTGAT CCAAACTCTAATCAGGAATTTGAGTTCAGAAAGGGGTTGCTCTACTTCAAGGGCAGGGTAGTAATACCTAAATCATCACC TAGGATTCCCAGAATATTGGAGGAATTCCATAACTCTGCAGTGGGAGGACATGCTGGTCACTTCAGAACTATGAAGAGGA TTTCCTCCCTCTTTTACTGGGAAAACATGAGGACAGATATCCAACATTATGTCCAAAGTTGTGAAGTGTGCCAGAGGAAC AAGTATCAGGCCTTGAGCCCTGCTGGTTTCCTTCAACCTTTGCCCATTCCTTCTCAAATCTGGACTGATATCAGTATGGA TTTCATAGGAAGGCTACCCAGGACTATGGGGAAAGATACTATACTAGTAGTGGTGGATAGGCTCACCAAATTTGCTCATT TTATAGCACTATCTCACCCCTATTCTGCAAAAACTGTAGCTGAAACTTTCATTCAAGAAGTAGTCAGGTTACATGGTTTT CCTAAGACCATTGTTTCTGACAGGGACAATGTATTTATGAGTTCCTTCTGGTCAGAACTATTCAAGTTAGCTGGCACTAA GCTGAAATATAGTACAGCTTACCACCCTCAGACAGATGGTCAAACTGAGGTGGTAAACAGATGTGTGGAGACCTATCTGA GATGCTTAACAGGGACCAAACCCAAGCTATGGCCCAAGTGGTTAGCATGGGCAGAATACTGGTACAACACTAACTACCAT GCATCCCTCAGATCTACCCCTTACAAAGCTCTATATGGCCAAGACCCTCCAGCAATCATCAGGGGAGATGTGACACAAAC AGCAGTAGAAGAGGTTTCTAGGCTAACTGCTGAAAGAAACCTTATGCTAGAAGAACTAAAAGCTAATTTGGCTCAAGCTC AAAATCAGATGAAGCAACAAGCCAATAAGCACAGAAGGGACATTCAATTTAATGTGGGAGATGCTGTTTACCTTAAGATC CAACCTTACAAACTTCAATCCCTAGCCAAAAGGACCAACCAAAAACTCAGTCCAAGGTTTTATGGTCCCTTCAAGATTAT TGAGAAGATCAGTGCAGTGGCCTATAAGTTACAACTTCCAGCAGGATGCTTAGTGCACCCTGTATTCCATATATCCTTAC TGAAGAAATCTCTAACTCCTTCAGTTCCAGTCCAACCATTACCTCAGGGACTATCTGAAGCATGGGAACTCCAAGTGGAG CCAGCTACTGTACTAGATTCCAGGGTTAGTTCAACTGGGGAGATAGAGCTACTAGTCCAATGGAGGAATCTCCCTGAGTT TGAGAATTCTTGGGAATCCCTGCATCAATTCCAGCAGCAATTCCCAACCTTCCACCTTGAGGACAAGGTGTTTTTCAAAG GGGGAAGTGATGATAGGGACTTAATCCACAAGCTAAAGAAAGACTACTCTAAGGTGTACACACGCAGGGGCAAAGTGGGA ACAGCCATCGATTCCACTACCACACATGGGGGAAAATAACTAATTGATGAGCTGGCAGATCCTCTTTGCAGAGGATCAGG CCAGAAGGTGTGTATAAACACCTGAGGGGGGGAGAGAGAAAGGTAGGCATCATTTCTGTTAGAATTGGGAGAGAAGGGAA CACTCTCGAATTGTTCCTAGCTTTATTGCTTTCTGTATTTTGCTTCCATTACTTCTGTATTTCCTAAGAATTTCTGGTGT TCTCATCAGAAATTCCCTATCAATATATCAGTAATTCAGTTTCTTCTTCCTAAAACCTCTGGTACCTAT 

CDS sequence (LotjaGi2g1v0245100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTGTTGTGCGCAAGTGGGAGAGCAGAACGGAGGAGCTGGAGGCCTTCCGCCGCCAGCTGGTGGCCGCCGCCGGTAT CCACCGTAGAAAGGACGATGAGGGAAGAAGAACCACCAAAACAGTCGTTGATGATGAAGAAGAAAGGGCCTTGCTCTGTG TCACTAGTGGTGTTTCCTATTTGGGCCTTGCTCTCGTCAACCATCTTTTGCTCTTGGGTTACTCTGTTCGTATCATCATT CACAACCCAGAGGACATAGAGAAACTGAGTGAAATGGAGCCATGTGGGACATCAGAACATAATTTGGAAGTAGTAATTGC AAACCTAACTGACATTGATAGCTTGGAGAAAGCATTTGAGGGATGTCGTGGCGTTTTTCACACCTCTGCATTTACCGACC CTGCTGGTCTCTCTGGCTACACAAAATCCATGGCTGAGATTGAAGTCAGAGTGGCAGAGAATGTGATGGAAGCATGTGCT AGTACATCTTCGGTTAAAAGATGTGTGTTCACATCATCACTATCAGCTTGTATGTGGCAAAATAATGCACAATCAGAAAC CTCCCCTGTTATTAACCATGAATCTTGGAGTTCTGAATCATTCTGCATAGAAAAGAAGCTTTGGTATGCATTAGGCAAAT TGAGGGCAGAGAAGACTGCTTGGAGGATAGCTAATGAAAGGGGTTTGAAACTCACTAGCATTTGTCCAGCTCTCATCACA GGTCCTGAATTTTATCAAAGGAATCCAACAGCAACAATTGCTTACCTCAAAGGAGCTCAAGAAATATATTCTAATGGTTT GCTAGCAACAGTTGATCTAAAGAAAGTGGTTGAAGCTCATTCGTCTGTATTCAAGGCAATGAACAACAATGCTTGTGGGA GATACATTTGCTTTGATAATGTGATTGGTACACAGAGTGAGGCAGAGAATTTGGCCAAGGAGATTGGTATGCCCAAAGAG AAAATATGTGGGGATGAATCTAACAATTCATTACATAGATTTGAACTGTCAAATGAGAAGTTATGCAGACTCATGTCAAG GCCAATCAGGTGTATCAGTGAATATTAG 

Protein sequence (LotjaGi2g1v0245100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGVVRKWESRTEELEAFRRQLVAAAGIHRRKDDEGRRTTKTVVDDEEERALLCVTSGVSYLGLALVNHLLLLGYSVRIII HNPEDIEKLSEMEPCGTSEHNLEVVIANLTDIDSLEKAFEGCRGVFHTSAFTDPAGLSGYTKSMAEIEVRVAENVMEACA STSSVKRCVFTSSLSACMWQNNAQSETSPVINHESWSSESFCIEKKLWYALGKLRAEKTAWRIANERGLKLTSICPALIT GPEFYQRNPTATIAYLKGAQEIYSNGLLATVDLKKVVEAHSSVFKAMNNNACGRYICFDNVIGTQSEAENLAKEIGMPKE KICGDESNNSLHRFELSNEKLCRLMSRPIRCISEY 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 34 354 321 1.1E-137
PANTHER 34 354 321 1.1E-137
Gene3D 43 353 311 1.4E-61
Pfam 53 254 202 3.4E-14
SUPERFAMILY 53 343 291 4.38E-36

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Molecular function Coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0245100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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