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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0253100 |
| Transcript ID | LotjaGi2g1v0253100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|A7MY11|Y3217_VIBCB UPF0294 protein VIBHAR_03217; TrEMBL-Plants: tr|A5AK27|A5AK27_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0253100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71869420..71875202) extracted from Lotus japonicus Gifu genome v1.2.
GGGATTATAGTGTCTACTGTTTTTATAACTCAATATAAAACACACTATTTAAGATCCATTAAATACATTTATATAGTAAC AAATAAAAAATATGTTTATATAAGAGTTTTTATATTTATTAAATGATAATTATTTTATGAGGGACGCCGGAGGAAGCTCT GCTAGGGCTCCCGGTGAGCGGCGAGATCGAGGAGAGGAGAGGCGGTGGGAGGTTGGGCGCAAGGGAGTGAAAGTTTCACC TGTCTCTTTCTCAGTTTTTGTTGATGGGCTGAGCGATGGCATCTCAAGAGCAAAGGTGGCTTCCATATTTTCAAAGGTTG GTGTCTCAGGTTCACCACAAATGCAGAGGCAGAGTGTGCCATTCGAAAAACCGAACACCCAAACAGGTTGGAAAATAATT TAGGTGAGGCACATGACAGAAACAACGTTGACTGTTTATTTCAAGGTAACGACATCAGCGTTGATATTAAGGAGGATTTT GAGAGAAAGCTGAATTTCAAGAAAGGGAGAAAGAGGAGTGGAGGGGTAGGATTAAAAAAACCTGTACAGAGAGAGGGAAG GGGCGCAGCTCGCCGTGGAAGTAAAAACAAGCCCAAGGTACCGCTGGTGTTTGATTCGCCCTGTTCTGGTGACGAGATTG GAAACGAAGATGTCTCTTCCTGGGCTAGGAGTGCGTGGCGGGTAGGCAAACAAATGGGAATTGCTTTTAAAGGTGATGAG GAACAACTGATTCAAAGGCTGCAGAACCAGGTGCGTGTAAATCATCCTGATTTACAGTAGCTTCTTTCCTTTGTAGATTC TGTACCTTGCTATTTGTTGGGACAAATTGTTAGAAAAATGGGGCACTATTGGGTTACATGGAATGTCCGCGGAATGAACA GGGCGTCGAAAAGAAGGGTTATTAAAAAACAACTGTCAGTGGCTAAACCAGGGTTAGTTCTGATTCAAGAGTCTAAACTG GGAGCAGGGACAGAAAAATTAATTGACTCATGGGCACAATCTCTGGGCATGAAACATTCTATGGTATTAGCAAGTGGTAC GGCAGGAGGATTAATTTCTTTATGGCGAGATGGGGAAGTGGAGGTGATTCAGGAGATATCGGATCAGAGGTTCATTACTC TTTTGGTCAAGCTGCAGAATACTGAAGGGTTGACATTAGTTGTGAACGTCTATGGCCCCCATTCCGACGCAGAGAGATAT GCTTTTTTCGTGCAATTGTCAGTTATGGTGGCGGAGCATCGTGGTGGGGTGATCATGGGAGGCGATTTCAATGCAGTCAT CCAAGAAAATGAAAGAAAAGGGGGTGGTGCGCTGCACTTGGGAGACATTGCATTCCATCAGTTTGTGGCTGATTCGTGTT TGATGGACCTACCGCTGCAGAGAGGCTTATTTACTTGGTTTTCATCAAGAAATGACGGCTTAGGGAGCCGGCTTGATCGC TGGTTATTATCTGAGGACATGTTTCTGTGCTTTAATAATTTTAATCAGGTTGCATTGGAGTGGGGCATATCAGACCACAG GCCAGTCGCAATTGATTTTGGATTGGATGACTTTGGTCCAAAGCCCTTCACTTTTTTCAATCACTGGATCCAGGAAGTTG GTTTTAATGAACTGGTGGAACTCGATTGTGGTGGAAGGGTGGGGAGGATTTGTGTTAATGAAAAAGTTACAGCAGCTGAA GGGGAAAATAAGAGGGTGGAAAAAGGAAAGGGGTGTATGGGGTGTAAAACGGATCCGAGAGCTGTAAGAGAAGGTGCATG TTTTGATGTCTCGGATGGAAATGGAAGGTGTAAATGATGACCTCAGAATGGAGCGTATTTCAATTATGGGGGAGTTGTGG AAGGAGTATAGGGCAGAGGAAGCGGCATGGATTCAAAAATCAAGACTGAAGTGGGCAAAAGAAGGGGATAGAAACACTCG ATTCTATCATAGAGTGTGCAAGGTAAGGGCAGCAAAAAAGAATATCAATCAATTGCGCTATGAGGGCAGATTATTGGAGG AGCCTGATCAAATCAAAGCTGCTGTAAGGAGTCATTTAAAAGTTTTCTTCACTCATGTATCGTCTGAGCGCCCTATCATT CAGTGCCATAATTTGCCGAAAGTCCGTGCAGACCAAAATCGGATTTTGGAGGCTGCTTTTACAGTGGAGGAAGTGTTTGA AGCGGTTCAGAATTGTGACGCCCATAAGGCACCAGGTCCTGATGGTTACACAATGGCTTTTTTTAAACAGTTTTGGCGAC TTATTAAGGATGATGTGATGCGGTTCTTTGGAGATTTTCACGGTAATGGCAAGCTAGTAAAAGGCCTGAATTCCGCTTTC ATTGCCTTGATCCCCAAGGGAAATTTTCAAGAGACTATGTTTGATTACAGGCCGATAAGCTTGATAGGGGGGCCTATAAA ATTCTGGCAAACAGGTTGAGGGAGGTGATGCCCACAATCTTAACACACAACCAGTTTGCATTCACCAAAGGAAGACAGAT AGCGGATTGTGTTTTTATCGCAAATGAGGTAGTAGACTCCATGAAAAAGAGAGAAGGGGGGGGGGGGGGGCTTCTTGATG AAGCTTGATTTTGCAAAGGCCTATGACAACGTCGAATGGGAATTCTTGCTCGATATGATGAAAGAGATGGGCTTTGGTGA GAAATGGCGGACTTGGATGCATAGCTGCATTTCAACAGCAACACTGGCAGTGTTAGTGAATGGTTCACCTACTGATTTCT TTCAGATTCAGAAAGGTTTGAGACAAGGGGACCCCCTATCCCCGCTTCTTTTTAATTTATGCGCGAATGGAATGTCTTGC TTGCTGAACCAGGCAGTCGACAGAAATTTTCCAGCAGGGGTAGATATGGGAGGTGGCCTGAGATTAAACCATTTGCAATT CACTGATGACGCTTTGCTGTTTTGTGAGGGTGATTTGAGACAGGTCAAGAGGCTTGCTTTGTTGCTGGAGGCATTCTTGT TCGTTTCTGGTCTAAAGGTAAATTTCAGAAAATCCTCCATAATTGGTGTGAATGTGGAACAAGACTTGGAGGTACAGGCT GCTGGTCTACTTGGTTTTAGCAGGGAACAACTGCCTATAGTTTATTTGGGGTTGCCACTAGGCGGAAGGCCTACGAGAGT GGTATTTTGGCGACCGGTTCTGGAAAAAATGGCGTTAAAATTGGGGAGCTGGAGCTCAAAGTTCCTGTCTTTAAGCGGGA GGGTTGTGATGATTAAATCTGTTATTAGTGCTATCCCTTTGCACTACATGGCAGTTTATAGAGCACCGAAGGGGGTTATC CAGGAGATGGAGGCTATGATGAGGCGATTTCTTTGGGGGGGATCTTTGGGTAACAGGAAAATTCATTGGGTGGCATGGGA AGATATGTGTAAAGGGGTCCGTTTTGGAGGTTTGGGGTTGGGTTTTCTGGAATGGAAAAACAAAGCCATGTTACTAAAAT GGATTTGGAGATTTGGAAGAGAGAAAATGGCCTTGTGGAGAAGAGTGGTGTGTGTCAAATTTGGGCTGCAAGAGAACTAT GTAATGCCAAAACTGGTCGGTATAAGGGGTGCTTCAGGATCGTGTGTTTCCATGGGTCATTTGGTGCTATGGAGGGAACA AACGGATGTGGTAAGCGAGTTTTTTAATGGACTGGCTTGCAAGTTGGGGAATGGGGAGAGCATTCGATTTTGGGATGATC TGTGGATAGGGGACATGACGTTACGTGTAATGTATCCACGAATATATTCGATGAGCTTAAAGAAGAATGGGGCTGTGTCA GAAGTGGGGCATAGGATTGGAGGGAAATGGGAATGGAACTTGGAATTTAGGAGGGGTTTTTTTGATTGGGAGTTGGATCA GTATCAGGAATTTCAGTGTCATATCCAATCTGTGTTGTCAAAAGAAGAGCCTGATACCATATTCTGGAAAGGGGACACAA TGGGCATGTTTTCTGTAAAAGGACTATGTTGTGCTTTGGAAGACAAATGGTATCATGAGACGGGGTGGGTGGTATCCAAG GCAATTAGAAAGATGGTGCCGGCAAAAATCACTACATTTATGTGGCAGTTGCAACAAAATAGGGTGGCAACGAAGGCGAA TTTGCTGGCAAGACATATCATTCTACCCGAAGATGGGATTTGTGGGCTGTGTGTGGATGGGATAGAGACGGCAGATCATC TATTTCTTCACTACAAAGAAGTATGGGTGACATGGTGCTCCGTTGTGCAGAGAGAAGGGTTATGTTGGGTCATCCCTCAA ACTGTAAGTAATTTGCTGCTTGAATGGGGAGAATTGAGAACCATATCTGATCGGGTTATGTGGGACATGATTCCTTACGC GCTTGTTTGGACGATATGGCTAGAACGGAATGGGGTGGCTTTTAATAACAAAGCTTTTTGCGGGCAAGACTTGTGGGATA TGCATATTGCAAGAGTAGGTTGGTGGGTGAGAGCATGGTGGAGAAGCTGCCCTTATACTACAGCTCAGTTTGTTGTAGGT CCTCAACATATCGCCCTGCCTAAAACAGCGAAAGTTCGAAAAATAGTTCAATGGATTCCACCAGCGGAGGCAATTTTAAA GTTCAATGTGGATGGATCCTCGTTGGGGACACCGGGAAGGAGTGGTGTGGGAGGGGTTTTGAGAAATCATGAAGGTGTAG TGGTGGGTGTTTTTGCCCTTGAAATGGGGGATATGTGGGCTTTTGAAGCAGAGGTTCATGCAATATATCAGGCGCTTCTA TTCTGTCAGCAGTTTAACTGCAGAACAATTGTTGTGGAGAGTGATTCGACGCTGGCGGTTGGATGGGCTAATAATGGAAA TAGAAGACCATGGAAGTTGAATCAAATTCTGGGAATGATTGATCATCTTGTGCCTCTGGTTAATTGTCTGGGCATTTACC ATGTTTTGAGGGAAGCAAATGAGGTTGCAGATGTTTTAGCGAAAAGTGGTAGAGATGGCCGACTCATGCTTTGGCAAATG TGTGATGATGGTCTCCCTAGTTTTGTTTAACAGTTCTGGTTTACATGCACGGATTACTCTCTTAATGCTATTGGGATTGC TTAGCAGGTTTATTAATTTGGTATATTGGTGCAGTACAGGTTTATTAATTTGGTTTACAGGCATGTTTTCTGATTTTGCT ACCATAGGCATTTACAGGGAGACTTAATGGGTTACTGGTTTTACTGGTTTTTTAAAAGATGAAGAGAAACTATGATGTGG GATTTTATTAGTTTAGAACTGGTGGTTTCCATTGGTGCCTTGTAGTGGGATTTATCTGACAGTGAATGGGAATCTCTTTA CTTTTTTATGATGTTATGCAGGTTTTGATTATGGCATGAGATACCGTGAGATGGAATTGAAGATATATGGGGGCAAGGCT CGTTTGTGGGTGATTGAAGCATGACTATTGATCCTGGTTGCTGTGTCACGCATGTGTAATGGAATTGCAGCTTAAGTTTT AAAAGAAGGTGTTGTATGTGACGTTAGTGGATGAATTTTTCCAGTTTGTATTTAATGGCTAGTTTTTGGCCATTTTGAGA CTAGGGTACTCTTTTTCCTTACTAGGTTTTTTCCCACTGGGTTTTCCTAGTAAGGTTTTAACGAGGCCCTGCTTAAAGGT CTTGGTCAATTTAGGAGAGGGTTATGTCTACATTTGAAAATGACAGACATATGTATTGTGGGATTTGACCGGTTTTTTGG TCCTCTTAATAATATGAATTTCAGTTGTCAGAAAAAAATTAAATGATAATTAAAATACTCGTTAAAAGACCTTTAAGTAG CTTTTTTTTAATTTTAAATACGG
CDS sequence (LotjaGi2g1v0253100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCACTATTGGGTTACATGGAATGTCCGCGGAATGAACAGGGCGTCGAAAAGAAGGGTTATTAAAAAACAACTGTC AGTGGCTAAACCAGGGTTAGTTCTGATTCAAGAGTCTAAACTGGGAGCAGGGACAGAAAAATTAATTGACTCATGGGCAC AATCTCTGGGCATGAAACATTCTATGGTATTAGCAAGTGGTACGGCAGGAGGATTAATTTCTTTATGGCGAGATGGGGAA GTGGAGGTGATTCAGGAGATATCGGATCAGAGGTTCATTACTCTTTTGGTCAAGCTGCAGAATACTGAAGGGTTGACATT AGTTGTGAACGTCTATGGCCCCCATTCCGACGCAGAGAGATATGCTTTTTTCGTGCAATTGTCAGTTATGGTGGCGGAGC ATCGTGGTGGGGTGATCATGGGAGGCGATTTCAATGCAGTCATCCAAGAAAATGAAAGAAAAGGGGGTGGTGCGCTGCAC TTGGGAGACATTGCATTCCATCAGTTTGTGGCTGATTCGTGTTTGATGGACCTACCGCTGCAGAGAGGCTTATTTACTTG GTTTTCATCAAGAAATGACGGCTTAGGGAGCCGGCTTGATCGCTGGTTATTATCTGAGGACATGTTTCTGTGCTTTAATA ATTTTAATCAGGTTGCATTGGAGTGGGGCATATCAGACCACAGGCCAGTCGCAATTGATTTTGGATTGGATGACTTTGGT CCAAAGCCCTTCACTTTTTTCAATCACTGGATCCAGGAAGTTGGTTTTAATGAACTGGTGGAACTCGATTGTGGTGGAAG GGTGGGGAGGATTTGTGTTAATGAAAAAGTTACAGCAGCTGAAGGGGAAAATAAGAGGGTGGAAAAAGGAAAGGGGTGTA TGGGGTGTAAAACGGATCCGAGAGCTGTAAGAGAAGGTGCATGTTTTGATGTCTCGGATGGAAATGGAAGGTGTAAATGA
Protein sequence (LotjaGi2g1v0253100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHYWVTWNVRGMNRASKRRVIKKQLSVAKPGLVLIQESKLGAGTEKLIDSWAQSLGMKHSMVLASGTAGGLISLWRDGE VEVIQEISDQRFITLLVKLQNTEGLTLVVNVYGPHSDAERYAFFVQLSVMVAEHRGGVIMGGDFNAVIQENERKGGGALH LGDIAFHQFVADSCLMDLPLQRGLFTWFSSRNDGLGSRLDRWLLSEDMFLCFNNFNQVALEWGISDHRPVAIDFGLDDFG PKPFTFFNHWIQEVGFNELVELDCGGRVGRICVNEKVTAAEGENKRVEKGKGCMGCKTDPRAVREGACFDVSDGNGRCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 234 | 230 | 5.5E-32 | ||
| SUPERFAMILY | 6 | 235 | 230 | 2.09E-34 | ||
| PANTHER | 61 | 262 | 202 | 2.7E-23 | – | |
| PANTHER | 61 | 262 | 202 | 2.7E-23 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0253100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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