Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi2g1v0253300.2

Overview

Field Value
Gene ID LotjaGi2g1v0253300
Transcript ID LotjaGi2g1v0253300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G37440.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q0WT19|IP5P8_ARATH Type I inositol polyphosphate 5-phosphatase 8; TrEMBL-Plants: tr|K7LXD9|K7LXD9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0253300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:71927612..71932684) extracted from Lotus japonicus Gifu genome v1.2.

CAACAGTAGTCTTCAATCATAAATAATGGTCCAAAATTAGGAACATTTGCGTTATACAAAATTATATGACTTTAAACATG CAATAACAACAAAACAACTAGATATCCATGAGACATACGTGACCAGCACCACCTAACAGGCTCAAATAATCAAACACTTG ATAGAACCTTGTGAGGCCTATATATCTTCTTTCTCCTTGTCTTTGGACGCAGTCATTTAATGCACGTACCTCTTAACCTC ACCTCCAAGTCTTGAAACCATTGGAAGCTTCTTACCCACTTGCATATTTTTATTTCCATTCTCTTGTGTTCAACGATCAT TGCACGGACCTCATCTTAAGCTAGCTACCTCTGTTTGCCACTTCCTCTTGTTGGTATATGCCGATTAGCACAACAAATCA ACAATGCACAGCTTCAAGGTAATTCAGATAAGCTTTTTTTAATGTGAAGAAGGAAAACCCCTCCTTCTGAGTCAGCCATG GTGGAGGAGAATCAGAAATTAAGATGTAGGAAGATACTTAATTGGTTTAGCAAGAAGCAAAAGGAAAATAAGCCATCATC ATTGAGTTCGTATGAAATAGAAGGTTTATAATTGTATTCCTCTCCATCCAAGAAAGAAAAACAAATATATATAGTTTTAT GTATGTTAATCATGTTCTGCTTTCAAAGACATGATTCAATTGTGGGGGGTGCAATTTATTCTGCAGATGGAGCAGAAGAT GAGAGTGATCACTCCAGGGGCAATCTGTCCCTTCAGTCACTGGAATTTGATCCATGCATTTCAATAGACAAGTTAAGGTA AATCAAAATTACACATATTTGTGTGTGTGTTTTATATGTATGTATGTATAATTCTTTCCATTTGATGCAAAGATGTTAAA GTAATAATCAATTTTAGCCTGGAAATACTATAAGTTCAATAAGAAAGACAAGAAGAGGTAGTTATCCTGCTACTCCCTAT GATTTCTGTCAAACAACACAGTGCCTAATTGGAAACTCTTATACAATTGATTCTGAAGTCAGAGTAAATTTGGGTATAAG TTTTTGTGGGAAGCTTTTTTGGACTTTAGCCTATGATTTTTGTATGACATTATATACAATAAGTGTGTGCATATATGTTT CAGGATATTTGTTGGAACTTGGAATGTTGCTGGCAGATCTCCTGTGGGAAGCTTAGCTGTTGACATGGATGAGTGGTTAA ATCTCAAGAATGCTGCTGATATATATGTTCTTGGGTATGAGTTTCTATTTAATTGATAACATCCCATATATTAATTCTAC ATGAAATTTCATTTTTATGAGTGAAAATGAAAGGTTTTATCTTAAAATTTGAGTTAGGCTTAACTTTAATATAAAAGCTA GCTTAAGGGTGAAAATCGCTTTACTGTATATATAAATTTATTTGATCATATCTCTAGTGAATGTGAATGTGAGATGTTAA CCCTTTTCAATTAATGTTCAGGTTTCAAGAGACTGTACCATTGAAGACCTTAACTGTGATAGGAGCAGAGGACCCTTCTG TGGCAACAAACTGGAACCAGCTCATAGGAACAACACTAAACAACAAATTTAATTACCACCAGAAGATGGAGAGTCCAAGC TCTATAGCTGGAAACAATTTGTACAGGGTTGTGGCTAGCAAGAAGATGGTTGGAGTGTTGATGAGTGTGTGGATAAGGGA GGAAGTGATGAAGAAGTATCGAGTTTCAAACGTGAGAGTTTCATCAGTGGCTTGTGGGGTCATGGGGTGCTTGGGAAACA AAGGTTCTGTGGCGGTTAGCATGTTGATTGAAGGGACTAGCTTTTGTTTTGTGGCGGCTCACTTAGCTTCAGGGGAGAAG AAGGGTGATGAAGGGCGTAGAAATCATCAGGTGGCGGAAATTTTCAGGAGAAGCTCTTTTGCTAGGACCACAACATCACA TCATCATCGTTATCCTCTAACCATCTTAGGACACGAGTAAGTCTCTATGCCCTACATCACTGTTCTTTTGTCTTCTGTAC TTTGCTTGTTGTTTTGAATTGTTGAGAAATTTCATACGAAACTGAAAATTCTTTGCCGTACATTTGTCATGAAAACCATT AATCCAATAATTGGCAGCATGATTTTAATTAAACAGCAGCTGAAGTTGCATGATATGAACAAATTATGAAGAACCGTAGA AATATATGCAAATGATGGGGTCATAATTGTAGTTGTGACATAATAATGATGAGATATTAAGTGTGGCGTGATGGTTGCTT ACCTTGTCTCTTAACTATGAGGTTGGGATTCGATCCCCACCAATAAAAGTGAAACTCATTTCGCAATCAATTGATTACCG CTTAATACAAATCCATGAGGTGAATAAATTAGTCATTATCGGCCATGAATACTTTGATAAAAAAAATGGGATAGGGCAGC CACACGATTACGTACCTACCAACTTGTGTGGCGTCAATAATTTTCTTTTTAAAAGAGATAACTCTTTGTTTCTTCTTCAA TAAAAAAAATGATATGTCATATTTTTAAAAAAATCTCTTTTTTGTTTTGGTCAAATTACAATATTCTTTTAGAAATAGGA TATTGTCCCTTCTTCAGTAAAATGATATGTTTTTTTATGAAGATAGCTTGGGCCCTAAACCATAAGACTAGTCCAAAACA GAATCCAATGTTAAAAAGCCTTTTAATTAGTTGACCCAAAAAAAGAGTTCATAAAAAAAGCCTTTTCATTAGTTGAAAGA AAAAGCTTTTTAATTAATCTAAAACGTGTCAAAAAAAAATCTAAAACTTTCATTAGATTTAAGGTGGCATTTTTTTATCA CCTTGTCTATAAATAATATATTAAATTTTTTATTGATATTAAACTTGTTTAAATAAGTAAAATTATTTTCCATAAAAAAA AATAATAAGTAAAATTCTTACTCCCTTTTTTTCGAATCCAATAATGGTTTTTTTATCTTGAGGAGTATTTGAGGGACCTT AACTTTTATCACATTCGGGTTGAATATGATTACCTCAATATACATGTGGCTACAACTAACAAAAACATATAGAATTTACT ACTACACTACTCTTGATTAAAATGCATGTGTTTAATTGTCTACATGGTGCAACACAAACAACTTAACCAGCATTTAACTG TGTTACAGACGCATATTCTGGTTTGGGGATCTCAACTACAGGCTATATTTGAAGGACGATTTTGCCAGGAATCTAATAAG AAAGCAAGATTGGAAGGCTTTGCAAGAGTTTGATCAGCTTCAGAAAGAGCTAGAAGAAGGTGGTGTGTTTGAAGGTTGGA AAGAAGGTAACATAGAATTTGCGCCTACATATAAATACGCATCGTCCCCTAGCAATCTATACTGTGGTGGTGGCCTTCCA ACTAGATCAGGGGGGAAGCAAAGAACACCAGCATGGTATGCTAATTAGTTCATCATTTGATTGACAATTTGTTAGAAATA TAATATAAAATCATTCATGTGTCTTCACCCAACAGGTGTGACCGGATTCTGTGGTATGGTAAAGGAGTAGAGCAACTTCA ATATATTCGGAGTGAAAGCAAATTTTCCGATCACCGACCCGTTTCAGCGCTTTTCTCTACACAAATTGAAGTTAAGTCAT CTAGCAATGGACTTATGGAACCAGAAAATATCACCCCAACAATGTGGCAACCAGATCATGTAAGTTTTCATTGCTTCTCG AAGAGTTATGAAAGGGATGTGTAATTTACTTGCATCATATAACTCAAAGCCATCACATACTTATATAAGTTAATTCAAAG ATGAGAAAGTAAAGGATGATGATTTAGATATGTGAGTATGTGAGGCTTTTTGAGTTCTGACCTTTTGAGATAAAACAAAG TTTTGAAGGCTAGTTCCAAGATCATGATTTTCCATTAATTGATTATGGCAGGGTGTTAGCCAAGGAGATGAAGATGGAAA ACCTACCTTGCTTTCATTGTTAGACAAGAATGTACAAGGCTGCTAACAAGCAATTAAATCTTTAGATTGAAACTTGAAGG GATGACAATTGATATATAATTTATTTCCTAAACCAACATTTATTTTTCTGGATATTAGGACTTTAAAGATTAAATTTAGA CGGCAAGGTATAGCAAATGTAATATATTGCTGTTGAAAAATCAAGATGTACCATAGATATAACATGGAGAAGTTTTAGTG CCAATTACCAAGTCAGAGAAAAACAGAACAATATAAATTTTGTGAATTATGCAGATACTATTGATCAGTAACTAGCCCAA TATCTACTAAAAAAGAAATATATTCACTGTATTGTGTTCCCAAACTTTTCATCTTTTCTATTTCCATGTAAAACATGTTC TAATCCATCATTCATTGCCATATGTCACTCAAGGTCTATCCGAATTTAGACCATGCATCATGAATGAAGTTCAGATCGTC TTTGAAATTCCTTATAAGAGAACTGTAAGATGCTCCTCATTTAAAAGTCCACATGTTTCCACTTGGGTGTAAATCCATTC AAATCTTTATGTCCATAAATAATACTAATATCACAGGCTTACCAAAACTCGGAAAGAAAAAAAAGTTAATGTTATAGAAC AAGGTATATTCTCTGTTTCACCAAAATTGGAATATTTTCCCCTGTGAAATTAACAGTATGTTAGTGAGAATCTGGAATTT TTGCACTGTTATCTTTTGAAGCACTCTACTCAGCATAAAGATGTGGAAATTGCATGTTATTGAAATGGAGCTACTAACTA CTAACCAATTAAACTGATTTGTAATTGAAGAGTCATGCCACTTATTTCAACATATGTCATATGTTCCAAAGGAGAATTCA CATGGCTTGTGTGCCTGTCTCAGAGGGGTTTCTAGTTTGCTCCTGAAGAGAGTGAAATTATTGAACACTTTATACAGGAT GTGTGACAAGAAAGGCTGAAGTTATCAAAACAAAACAAATTTACCACTTGAATGTATAGAAGGATATATAGATAGATCCT ACATTTGTTTTGTTAATTTCTTTGGTTTACATGTTCATCACAGACACTTTTCTTTCATAAAGAAAGAGTGAAGTATAAGA AGACCAATATATGAGAAGGAATCTGGTTTTCCA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0253300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGAGTGGTTAAATCTCAAGAATGCTGCTGATATATATGTTCTTGGGTTTCAAGAGACTGTACCATTGAAGACCTT AACTGTGATAGGAGCAGAGGACCCTTCTGTGGCAACAAACTGGAACCAGCTCATAGGAACAACACTAAACAACAAATTTA ATTACCACCAGAAGATGGAGAGTCCAAGCTCTATAGCTGGAAACAATTTGTACAGGGTTGTGGCTAGCAAGAAGATGGTT GGAGTGTTGATGAGTGTGTGGATAAGGGAGGAAGTGATGAAGAAGTATCGAGTTTCAAACGTGAGAGTTTCATCAGTGGC TTGTGGGGTCATGGGGTGCTTGGGAAACAAAGGTTCTGTGGCGGTTAGCATGTTGATTGAAGGGACTAGCTTTTGTTTTG TGGCGGCTCACTTAGCTTCAGGGGAGAAGAAGGGTGATGAAGGGCGTAGAAATCATCAGGTGGCGGAAATTTTCAGGAGA AGCTCTTTTGCTAGGACCACAACATCACATCATCATCGTTATCCTCTAACCATCTTAGGACACGAACGCATATTCTGGTT TGGGGATCTCAACTACAGGCTATATTTGAAGGACGATTTTGCCAGGAATCTAATAAGAAAGCAAGATTGGAAGGCTTTGC AAGAGTTTGATCAGCTTCAGAAAGAGCTAGAAGAAGGTGGTGTGTTTGAAGGTTGGAAAGAAGGTAACATAGAATTTGCG CCTACATATAAATACGCATCGTCCCCTAGCAATCTATACTGTGGTGGTGGCCTTCCAACTAGATCAGGGGGGAAGCAAAG AACACCAGCATGGTGTGACCGGATTCTGTGGTATGGTAAAGGAGTAGAGCAACTTCAATATATTCGGAGTGAAAGCAAAT TTTCCGATCACCGACCCGTTTCAGCGCTTTTCTCTACACAAATTGAAGTTAAGTCATCTAGCAATGGACTTATGGAACCA GAAAATATCACCCCAACAATGTGGCAACCAGATCATGGTGTTAGCCAAGGAGATGAAGATGGAAAACCTACCTTGCTTTC ATTGTTAGACAAGAATGTACAAGGCTGCTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0253300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDEWLNLKNAADIYVLGFQETVPLKTLTVIGAEDPSVATNWNQLIGTTLNNKFNYHQKMESPSSIAGNNLYRVVASKKMV GVLMSVWIREEVMKKYRVSNVRVSSVACGVMGCLGNKGSVAVSMLIEGTSFCFVAAHLASGEKKGDEGRRNHQVAEIFRR SSFARTTTSHHHRYPLTILGHERIFWFGDLNYRLYLKDDFARNLIRKQDWKALQEFDQLQKELEEGGVFEGWKEGNIEFA PTYKYASSPSNLYCGGGLPTRSGGKQRTPAWCDRILWYGKGVEQLQYIRSESKFSDHRPVSALFSTQIEVKSSSNGLMEP ENITPTMWQPDHGVSQGDEDGKPTLLSLLDKNVQGC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45666
1 56 56 1.8E-189 –
PANTHER
PTHR45666:SF7
1 56 56 1.8E-189 –
SMART
SM00128
1 312 312 3.8E-54
IPR000300
Gene3D
G3DSA:3.60.10.10
1 326 326 3.9E-93
IPR036691
Pfam
PF03372
3 297 295 2.6E-11
IPR005135
SUPERFAMILY
SSF56219
4 308 305 1.44E-53
IPR036691
PANTHER
PTHR45666
64 353 290 1.8E-189 –
PANTHER
PTHR45666:SF7
64 353 290 1.8E-189 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046856
Biological process Phosphatidylinositol dephosphorylation The process of removing one or more phosphate groups from a phosphatidylinositol.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0253300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…