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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0256200 |
| Transcript ID | LotjaGi2g1v0256200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carbonic anhydrase; TAIR: AT3G01500.1 carbonic anhydrase 1; Swiss-Prot: sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|G7KIQ9|G7KIQ9_MEDTR Carbonic anhydrase; Found in the gene: LotjaGi2g1v0256200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:72258928..72261322) extracted from Lotus japonicus Gifu genome v1.2.
CCGAAGTCTTAAGAATCCTTTTTAGAACGACACAGCATCCTATTTGAGTCAAAATGCCTCAATTCAATGTTTCATACAAG CCTCACAAGATTAACCCTATGCCTATGTTAGAAGAAGGATCATCAATTATTGTCAAAGACTTGTTTCAGGATGCAGACAT TGATCCCCATGTTTTTAGTAACGGGATGTTGACACTTGTATGAGTAAGTCATTATATTATACCTTACCTTCATAATAGTC TACCTTTCTTTTGGCTTAAGCTTTCTCATTCTTTTTCATTAATTTTTCCACAGCAAAAATCCAGCTTTGTATGGAGAACT TGCCAAAGGCCAGAGCCCACCGGTACTTAACTTTGTGACGAATTGTTTACACAATGGAACTTTGTTGAAATTTGAATTTG CACTGGAGACCTCTCAGAACCATGGTTTTGGCAAAAGTAGCAATAACCTGTTAATTTTTCCTAAACCATGATTTTGAGAA CTTTGTAAAGCTAAGCATGCATTGATAGTATGTTTGGATTGGCGGTGGACACAATTAATTCAAAGCACGTCAATCCCAGA AGTTACTATGCTTTGTAGTTTCTCTTTAGAAGTGATTATGAAGCTTCCAACCGCATAATCTAACAAACTATTAGATTGGA GATTTTTTATTTCTTGAAGCCTAACTTTGTTTTGCTTGGTTTTCTTTGTAGTATATGGTGTTTGCCTGCTCAGGCTCAAG AGTCTGCCCATCTCATGTGCTGGACTTCCAGCCTGGAGAGGCCTTTGTGGTCAGAAATGTTGCTAACATGGTTCGACCAT ATGACCAGGTCTTTTTTCAGTACATACAAAAAAGTGCCTTTTTTGCCTTGTTTAGTTGTCTTAATCCAATTCACTAAAAT GGTTACTTTCTTCATTTTATACAGGCAAAATTCAGTGGATCTGGGGCTGCCATTGAGTATGCAGTTCTTCATCTCAAGGT ATATCAAAACTGCACACAATCTCAAGCATACTGTCAACATTGATGATTCTGGGATTTATCAAGAATTTTTAACCCAAATG ATTTTCCTTCAGGTGTCCAACATTGCGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTCTGTCTTTCCCATT TGATGGAACCACCTCTACGTAAGTCATTACTTTGCACAAAAATTACACTCCTCCAGCAATTTTTCACCCCTTGACATTAT AATTGAAGCACAAATTCTTCAGTGTCTAGTAAAATGTATCAGGTCCTCTTTGACCAATTGGTTTAGAGTTCAGTCCTTAC TGGCTCTCATTATTCTAATAAAAAATTGAATTTCAGCCAAAGTATAATTTCGCATTGGTCACGCTTCAAGTCCAATGAGT TATGGCGTATTAGAAACATAATATAGAATCATAAACAGCTTAAACTTTTAGAATAGTTGGTTCTGGTAGAGAGAACTAGA CATTCTATATATATCCCGACATGATTCAGTAAGAAACTTTACTCTTTTATCTCTGATTTTCTGTGTGCAGTGATTTTATT GAGGACTGGGTCAGCATTGGTTTACCTGCAAAGGCCAAGGTGAAGGCAAAACATGGGGATGCACCTTTTGGAGAGCTCTG CACACATTGTGAGAAGGTATGAGGCAATAAAAGCCACGAGCTTGATTCATATCTTCTAATATCTTTCACTAATTTGTACA TAATGTTCAACTGCAATATACATGATAATTTACTTACAAGTTAAGTTGGATTGTATTGTGCAGGAAACTGTGAATGTTTC CCTTGGAAACCTGCTAAGCTACCCATTTGTGATAGAAGGCCTTGTGAACAAAACTCTGGCACTGAAAGGAGGATACTATG ACTTTGTTAAGGGATCTTTTGAGCTCTGGAGCCTCCAGTTTGACCTGGCTTCTTCTTTCTCCGTGTGAAAACCATTATCA ATGACCTCATCTTGGTTCCCTAAGTATTCTCCTCTCTAAAATGTACTATGTGATTTCCCTCTTTACAAGCTATATTTCCT AATAAATGTAAATGGAGATTCTCCATCACTTTCCATATTGAAGTCGTTCCTTTTGTGCAAAGAAAATTAGGAGCACTGTG TAATAATAATGTATGGTCTTTCACCACTGCAATTTTCTTGTTTGTTAGGTAAAAGATGTGGCCACAATTCTGCATTGGAA GCTATAGGGTCATGCTTAGAGATCCTGTGTCTGCGATGAAGAGGCCTAGCTACCTTCATCTTATGATATTCATATATATC ATCTATCTATATATATGAAACAATGAACTGGGTTCATGTATGTCTTCTTTTAATAAGAGTTGTAAATCCAATTGGGACGA AATTTTCATTATCTGGCGACACCGCAACTTCCTTCAAATATATTTCTGACTTATTTCAACAATTCTCAACGATTT
CDS sequence (LotjaGi2g1v0256200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTTGCCTGCTCAGGCTCAAGAGTCTGCCCATCTCATGTGCTGGACTTCCAGCCTGGAGAGGCCTTTGTGGTCAG AAATGTTGCTAACATGGTTCGACCATATGACCAGGCAAAATTCAGTGGATCTGGGGCTGCCATTGAGTATGCAGTTCTTC ATCTCAAGGTGTCCAACATTGCGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTCTGTCTTTCCCATTTGAT GGAACCACCTCTACTGATTTTATTGAGGACTGGGTCAGCATTGGTTTACCTGCAAAGGCCAAGGTGAAGGCAAAACATGG GGATGCACCTTTTGGAGAGCTCTGCACACATTGTGAGAAGGAAACTGTGAATGTTTCCCTTGGAAACCTGCTAAGCTACC CATTTGTGATAGAAGGCCTTGTGAACAAAACTCTGGCACTGAAAGGAGGATACTATGACTTTGTTAAGGGATCTTTTGAG CTCTGGAGCCTCCAGTTTGACCTGGCTTCTTCTTTCTCCGTGTGA
Protein sequence (LotjaGi2g1v0256200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFACSGSRVCPSHVLDFQPGEAFVVRNVANMVRPYDQAKFSGSGAAIEYAVLHLKVSNIAVIGHSACGGIKGLLSFPFD GTTSTDFIEDWVSIGLPAKAKVKAKHGDAPFGELCTHCEKETVNVSLGNLLSYPFVIEGLVNKTLALKGGYYDFVKGSFE LWSLQFDLASSFSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 174 | 174 | 2.0E-108 | – | |
| PANTHER | 1 | 174 | 174 | 2.0E-108 | – | |
| SMART | 1 | 163 | 163 | 6.1E-33 | ||
| Pfam | 1 | 158 | 158 | 9.6E-37 | ||
| Gene3D | 1 | 174 | 174 | 3.7E-66 | ||
| SUPERFAMILY | 1 | 169 | 169 | 2.62E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Carbonate dehydratase activity | Catalysis of the reaction: H2CO3 = CO2 + H2O. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi2g1v0256200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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