Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0262100 |
| Transcript ID | LotjaGi2g1v0262100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G39420.1 CDC2C; Swiss-Prot: sp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g54610; TrEMBL-Plants: tr|G7KLB8|G7KLB8_MEDTR Cyclin-dependent kinase; Found in the gene: LotjaGi2g1v0262100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:73061832..73067816) extracted from Lotus japonicus Gifu genome v1.2.
ATCGAATTGCATGGAAAACAGGGGAGGAGAGAGAAAAACAGGGGAAGTCAGAGAAAACAGGGGATTGTTCTGTTCTTCCG ACAACAAAACAAAACAACAATTTTGCCGCGATTTTCCAAATGCCCTTGTTTCTGGGTGGTGCCCATTTTCTTCTCCTCTG AATTACCTTCCGTTTCAGGTCCAGCAGCCGCATTGGAGGGTGCTGATGTAGGGGAAAATCTCCCCTACATTCATCATCGT CCATTTTCCTCAAATGGGTTGCATTAACTCCAAGAGAGCGGTTGCCGGAGCCTCTCCTCCGCCGCCGATCGACGGTGAAA TATTGGAGGCTCGTCTTGCTTCCAAGGGAAATTCAGGGTTGCTGGTTTTGGAACCTAAAAGTAAAACATCATCAGAAGAT AGTAAGAACAAGTTCACCAAAAACAGCTCTAGAAGAAGTGGTTCTTCTTTCAGCTTCAGGCTTGGTTTTACCCATAGGTA TGTGGAGGCTGAACAGAATGCTGCTGGTTGGCCTCCTTGGCTCACAGCTGCTGCAGCAGAAGCTGTTCAAGGTTGGATCC CCCTCAAAGCTGATTCTTTTCAGAAGTTAGAAAAGGTACTACTTTCTATTGCATATTGCATGGCACCATTCAAATTTTAC TTTCACTTTTCCCCTCCTTTTGAATAATTATGTTCTTTGAAATTGATCAAAATGCATTAACTCTATAGAAATTAATCATA AGGATAATAAGTTGTTATATGGCATTGATGGTATACTAATTCTGATTGCCAACCAAATTGACAAATTTTAAACATTGAAG GTAAATTCAGTTGTCATGAAGTTTGTGTTTTTGTATTAGTAACACACTCACATTATTCAAGATATTCCATTATTTCCTGT TATCATCATTTTTTTTGTTCTTCCACTTTCTTCTTTTTGGTCATTTTCACAATCCTTATAAAAAACAAACACATGACCAC AATATCAAATTATTCTGGAACACTGATTCATTTTTTTTTATCAAAATAAAAGGAATACTAAAACAAACTTTAGGTTATAT GTAACTTAAGTATTAATTGTCATGCAAATTGTTGTGTTTAACTGCTAAAGATACGGAGTTATTTAACTTTCGACTAGTGA ACCAGCTTATGATGAGTTAGCAACAAGCTTGTACAAAACTGAGTAGAGCAAGATAAGTTTTGTGTCTTCAAACTCTTTGC TATAAAGCATATTTTCTTGGTTTACAATGATGAATTGCGTGTTTACTGAACCACATTTTCTTTGTTATGTTAACAATTAG TTTTTCTACATTTTCATTTGTATAGATTGGACAAGGTACATATAGCAGTGTGTTCAAAGCACGTGAAGTTGAAACTGGGA AGATGTTTGCTTTGAAGAAGGTGCGGTTTGACAATTTCCAAGCTGAGAGCATTAGGTTCATGGCAAGAGAAATAACAATT CTCCGAAGACTTGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCCCGGCTATCAAATAGCATATACCTTGT ATTTGAATACATGGAGCATGATCTTGCTGGCCTAATATCTCGTTCTGACATCTCATTCACCGATTCACAGGTTTGTTAGC ATCTCTAATAAATCTGTCTTTAAAGAATGAATCACTGTGAGCATTCTACAATATAGGAAAGAAAAAGCAACATTCTCAGG CTTCTTGTTATGCTGCAAAATTTTTTAGTTTCTCCATTTAGTTAACTTTTCTTCATCTTCATTTATTTTTGGGTGTTAGT TAGCTTAGGCTACTTTTATACATTGAATGTTATATCATTGTTAACTGTTTTCTCCCACAGATAAAATGTTACATGAGGCA GCTATTAAGTGGACTTGAGCATTGTCATGTTCGCGGTATTATGCATCGAGACATTAAAGTTTCAAACATCTTGTTAAACA ATGAAGGTGTTCTCAAGATAGGAGATTTCGGATTAGCAAACACAATTAGCCCAAATAACAAGCATCAGTTAACAAGTCGT GTAGTGACTCTATGGTATCGTCCTCCTGAGCTCTTGATGGGATCAACCAATTATGGTGTATCAGTGGATCTGTGGAGTGT GGGTTGTGTATTTGCAGAACTTTTTCTTGGGAAGCCTATCCTTAAAGGGAGAACTGAGGTAATCCTTGTAATTGATGTAT TGTTTTAATCATTTCTTAAGAAACATAAAGCATTTGTTTGCATGTACTTAAGACTATTTGTGTGTGGACAAAAAGAAACT TTCACTAGTAAAACAGTTCCTCCTTGCCTTTCAGATGCTATAGTATTGGGGAAATTACAGCATATACAATTAAAAAAATG GTGCTTGAATTGTCTTTAAGATTGTGTTAGGTTCCAATTGCAAGGTATGGGTTTGGGTCCCGCATTGGAAGTATAGGGTT TTAATCTGGGTCTATAAGGTCTTGAGCTCTCCAACTACAATGGCTAGCTTTTGTTGTATGGTTCTCCAAGGTTCTTATCA GATTGTTGACTGCATTTAAGTGTGTTTGGATCAGCGTTAGAAAAATTGATTCCGGAGAGAATTGGTTTGAGTAGAATTGG TATGGTAACAAGAGTCAAAATGATTATGATGTGATTTATGTTTGGCTACATTTAAGAAAAAAATGGTTTTTTGGTAGAGT ATTGTTATGAAATTCAGTTGTAAAATCTCAGAATCAATTATGTTTAGCACATAAGCCACTTTCTCTAGCTTTTCCCAGAA TTGATTTATCTCTATCAGAATTGAATCTGGAGTTCCGCAACGTGTAACTAAACACACTCTAAGTTTTTATTAGCTAAACA TCAGACTCTCACTCAGTATTCCTGCTATAATGTGTCTGTGTATTCTGTACTTTTAAAAATGTGGACATGCAAACATATTT TATACAGTTCAAAATTCTTGAAGGAAAATAGAAGATAGAAAGAAAGAAACCCCTCTGCTTAGCTTCAAACTGCTGTTAAC TTTTAACTAGAAAAGCATATTAAACTTATGATCACTAAGGACTAAGAGGACAACCAAAATCTCTCTTTTTTTTGTTGCAC TTTGACATGATATATGTTCTTCTTGAGTCTACAGGTTGAACAATTGCACAAAGTATTTAAGCTGTGTGGTTCTCCATCTG ATGAGTACTGGAAAAAGTGCAAGCTTCCTCATGTAACAATGTTCAAACCTCATACTAATTATGAAAGCTCTCTTCGGGAG AGGTGTGCAGATTTTCCTGAATCTGCTGTAGACCTACTTGAAACTTTACTGGCCATTGATCCTAGCATGCGTGGGACTGC CTCCTCTGCCCTAATATCCGAGGTGAGTTTCTTTGAGTTTGGTCTATAAATTGTGGATCCTTCTTTTCTAGAAGGATTCT TATTTTGGAGTAGAGTTATTTTCATGATTTTATATTAAGATAAAGAATTGGCTTTTGGTGCGAAGTCTCACATTGATAAA AAATATGACCAAATAAGTCCATATAAAGGGTAGAGAAACCCTCACCTGCAAACTTCACGCTCCAGCCCTGGGCGTAAGGG GGTGTAAATACGTTAATTTATTAAGATTTTTTCTCAATGTTATCCAATTGCATTTAATGAGGTTTGATTTCTGATTTTGT GTTTCGTGGTGTACCATTTATAGTATTTCAGCACCATGCCATATGCTTGTAATCCTTCAAGCCTGCCAAAGTATTCACCT AGCAAAGAAATGGATGCTAAAACTCGGGAAGATATATCCAGGTAAGTTATTCTGGTTTTTATCATTAATTAAACATTGTC TTGACATAAGAATATCATGTAATTGACTTTTTCTCCAGCTTGAAGTCTTTTTGTTGAGTCTAGTTTTTAGTATTGGATCT TGTGCTTATGGAATGAAATTTAGAGGTTGCATAGGGCCTAAGATCCCCTCTTGGAAGAGTTTATTTGAGCTTATGATATA AGCATTTATGAAGTGTTTGAGTGAGTTACGAAAATAGCTTATGACCTAGCTATAAGCTCAAAATCACTCATTTTTACAAG CTGTTTAAACTAGCTTATGAATAAGCGCTTATACCTATACATAAACTATTTTGAGCTTATTTTTATGTAAGTTTCACTAA TTAGCTTCTGAATAAGAGCTTAATTAAAATGTTTACTCAAACAAACCCTAAACACAGTAGAGCAATTGGAGTAATTTTTT TTTTCCTATCATCCTTTATTATTTGTAACCTCCTTATACTTTAAAATGTTCATTTAAACCATTACCCAAGTTTAGATTGG GCATCTGAGTCAAGCAAGTAATTGAAAGTGGATAGTCTACCTGATTATGGATTCCAATAAAGCTGAGTATTTTATTTCAT GATCTTTAATCTCAGGAAAAAGACTGGAAGTAAAACGAGAGAGGCTGCGACATCAAGAAGGCAGCAAAGAAGAATATCTA AAGTTTTGCAAGAATCTAAAAATGCTGGCAAAACAGCTTCAAAAGAGGTACTTCTTCAGTCCAATGCTACATCACTAGAA GTTACTACTTTTATTGACGTCTCTTAACTTCATTGTGAAGGACAACTTGAACATTTCTCACAAAGCTCGTAGAGATGATG GTAAAACACATCATACAAAGGAAAAAGGAGGATCTGTGTACAAAGATTACTCAAAACCTTCAATGGATGCAATGTCAGAG ACTTCCCAGCTGGCGAATGTTGCTGATGGTAATGGCTATAGTGTACCATTACAAGGCTCCGGATCTAACAACTTTACATG GGTAAAAAGGAGAAAACCAGATGCATCATCCACACTATCAGATGGCTCAAGAAGCAAAATTAGTGCATTGGATCCCAACT TTGCGAAAGGCACATATGATTTGTCCAAACAAAGGGTATCCATGGACTTCGATCCCAAAGAACTGGTAAATGCTCATGTG AACATAAAAAATTCTTCAGGGGACTGGAATACAAAATAATACACAAAAGATATAAATAGTGTGTGTGAAATTAGTACGCA AGACATTTAATATTATGGATATTATTGACATCTTGCGTACTAATTTCACACACATTATTTATATTATTTTACACTAGAAA TTGGCAGGCGCATTGCGCGGATTTATACCAATAATTTTTTTATGGTGAAATGTAATTTTTGCTGCTTTATATAAAATTTG AATCAAGTTACATCTATTTTTGTTCACCAAAAAAATTACAGGGCCATAGAGAAGAACAAGGGGCACTTTGGAATGACGGC ACGCGGCGTATAGTTCGTAAATCAAGATTTGGACAAGGTAAATAATATGATAATTTTAAGAGGTGTTGTACAGAACAGAA GTCAGTGATACAAAAACTTTAACCTGTTTCTAATTCTATTATACCATTGGATTCATTTACCTTTGGATCAATATGTGAGC ATCACAAAAATTCTTCTCTGAACATATCAACATATAATCCAATGACTATATAGACTAGCAGTCTTTAAATTTCTAGACAA CTATGGAATGGCTTGGTTTGTGGCTTCTGAAATTTGGTTAATGTAGTCCATGTTTGGTTGTGTCAAACTTTTTTTAGGAG TGATGTAATAGTTATTGTTGTTTAAGACAACATTACAAGTTAATTCTGAATGAGTACTGAAATCAATTTGTGGTTTACAG ACAGATGAAGCATGGATTACAGAAGTGGAGCAATCCTCACATCTACATACAAGGGTGCTTGACAAAACATTCTGGCCAAT GTATCTGTTAGCAGCATCTGCACCATTTTAGCTTCTGACTTGACTTCTCCTGACATCTTGGTGGCACAAACATATAGGAT TATAAAACATAAAGATTGTTTTTTCTTTTCTTATGGAATTATTTTCTGTGCAGTTCTCTTTAATTTTGAGATAAAAAATC GCAAAAGTATTCTGAAATATCTCATGTTCTTGCGAAATTTATTTGGACTACAACAGAGTTAAGATCATCGTCACATGTTT ATATGATTTAGTGTCTTGTGAGGAAGGACCTTTTATAACTAATCAAATGAGAGAATTGACAAGCG
CDS sequence (LotjaGi2g1v0262100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGCATTAACTCCAAGAGAGCGGTTGCCGGAGCCTCTCCTCCGCCGCCGATCGACGGTGAAATATTGGAGGCTCG TCTTGCTTCCAAGGGAAATTCAGGGTTGCTGGTTTTGGAACCTAAAAGTAAAACATCATCAGAAGATAGTAAGAACAAGT TCACCAAAAACAGCTCTAGAAGAAGTGGTTCTTCTTTCAGCTTCAGGCTTGGTTTTACCCATAGGTATGTGGAGGCTGAA CAGAATGCTGCTGGTTGGCCTCCTTGGCTCACAGCTGCTGCAGCAGAAGCTGTTCAAGGTTGGATCCCCCTCAAAGCTGA TTCTTTTCAGAAGTTAGAAAAGATTGGACAAGGTACATATAGCAGTGTGTTCAAAGCACGTGAAGTTGAAACTGGGAAGA TGTTTGCTTTGAAGAAGGTGCGGTTTGACAATTTCCAAGCTGAGAGCATTAGGTTCATGGCAAGAGAAATAACAATTCTC CGAAGACTTGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCCCGGCTATCAAATAGCATATACCTTGTATT TGAATACATGGAGCATGATCTTGCTGGCCTAATATCTCGTTCTGACATCTCATTCACCGATTCACAGATAAAATGTTACA TGAGGCAGCTATTAAGTGGACTTGAGCATTGTCATGTTCGCGGTATTATGCATCGAGACATTAAAGTTTCAAACATCTTG TTAAACAATGAAGGTGTTCTCAAGATAGGAGATTTCGGATTAGCAAACACAATTAGCCCAAATAACAAGCATCAGTTAAC AAGTCGTGTAGTGACTCTATGGTATCGTCCTCCTGAGCTCTTGATGGGATCAACCAATTATGGTGTATCAGTGGATCTGT GGAGTGTGGGTTGTGTATTTGCAGAACTTTTTCTTGGGAAGCCTATCCTTAAAGGGAGAACTGAGGTTGAACAATTGCAC AAAGTATTTAAGCTGTGTGGTTCTCCATCTGATGAGTACTGGAAAAAGTGCAAGCTTCCTCATGTAACAATGTTCAAACC TCATACTAATTATGAAAGCTCTCTTCGGGAGAGGTGTGCAGATTTTCCTGAATCTGCTGTAGACCTACTTGAAACTTTAC TGGCCATTGATCCTAGCATGCGTGGGACTGCCTCCTCTGCCCTAATATCCGAGTATTTCAGCACCATGCCATATGCTTGT AATCCTTCAAGCCTGCCAAAGTATTCACCTAGCAAAGAAATGGATGCTAAAACTCGGGAAGATATATCCAGGAAAAAGAC TGGAAGTAAAACGAGAGAGGCTGCGACATCAAGAAGGCAGCAAAGAAGAATATCTAAAGTTTTGCAAGAATCTAAAAATG CTGGCAAAACAGCTTCAAAAGAGGACAACTTGAACATTTCTCACAAAGCTCGTAGAGATGATGGTAAAACACATCATACA AAGGAAAAAGGAGGATCTGTGTACAAAGATTACTCAAAACCTTCAATGGATGCAATGTCAGAGACTTCCCAGCTGGCGAA TGTTGCTGATGGTAATGGCTATAGTGTACCATTACAAGGCTCCGGATCTAACAACTTTACATGGGTAAAAAGGAGAAAAC CAGATGCATCATCCACACTATCAGATGGCTCAAGAAGCAAAATTAGTGCATTGGATCCCAACTTTGCGAAAGGCACATAT GATTTGTCCAAACAAAGGGTATCCATGGACTTCGATCCCAAAGAACTGGGCCATAGAGAAGAACAAGGGGCACTTTGGAA TGACGGCACGCGGCGTATAGTTCGTAAATCAAGATTTGGACAAGACAGATGA
Protein sequence (LotjaGi2g1v0262100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCINSKRAVAGASPPPPIDGEILEARLASKGNSGLLVLEPKSKTSSEDSKNKFTKNSSRRSGSSFSFRLGFTHRYVEAE QNAAGWPPWLTAAAAEAVQGWIPLKADSFQKLEKIGQGTYSSVFKAREVETGKMFALKKVRFDNFQAESIRFMAREITIL RRLDHPNIMKLEGIITSRLSNSIYLVFEYMEHDLAGLISRSDISFTDSQIKCYMRQLLSGLEHCHVRGIMHRDIKVSNIL LNNEGVLKIGDFGLANTISPNNKHQLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLH KVFKLCGSPSDEYWKKCKLPHVTMFKPHTNYESSLRERCADFPESAVDLLETLLAIDPSMRGTASSALISEYFSTMPYAC NPSSLPKYSPSKEMDAKTREDISRKKTGSKTREAATSRRQQRRISKVLQESKNAGKTASKEDNLNISHKARRDDGKTHHT KEKGGSVYKDYSKPSMDAMSETSQLANVADGNGYSVPLQGSGSNNFTWVKRRKPDASSTLSDGSRSKISALDPNFAKGTY DLSKQRVSMDFDPKELGHREEQGALWNDGTRRIVRKSRFGQDR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 3 | 576 | 574 | 0.0 | – | |
| PANTHER | 3 | 576 | 574 | 0.0 | – | |
| MobiDBLite | 38 | 64 | 27 | - | – | |
| Gene3D | 95 | 191 | 97 | 4.1E-26 | – | |
| SUPERFAMILY | 104 | 399 | 296 | 1.15E-90 | ||
| CDD | 109 | 393 | 285 | 3.26739E-156 | – | |
| Pfam | 109 | 393 | 285 | 3.5E-71 | ||
| ProSiteProfiles | 109 | 393 | 285 | 46.124 | ||
| SMART | 109 | 393 | 285 | 8.9E-92 | ||
| ProSitePatterns | 115 | 138 | 24 | - | ||
| Gene3D | 192 | 433 | 242 | 1.1E-68 | – | |
| ProSitePatterns | 229 | 241 | 13 | - | ||
| MobiDBLite | 404 | 501 | 98 | - | – | |
| MobiDBLite | 412 | 446 | 35 | - | – | |
| MobiDBLite | 447 | 461 | 15 | - | – | |
| MobiDBLite | 462 | 488 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0262100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…