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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0262500 |
| Transcript ID | LotjaGi2g1v0262500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hus1-like protein; TAIR: AT1G52530.1 Hus1-like protein; Swiss-Prot: sp|Q54NC0|HUS1_DICDI Checkpoint protein hus1 homolog; TrEMBL-Plants: tr|I3SJI1|I3SJI1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0262500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:73139733..73146201) extracted from Lotus japonicus Gifu genome v1.2.
AACCACTCTAATTTATAGTCCAAATTGAAGAACTACCATCACCAAGGAAAACTCACTATGAATGTTATATTAATTAATTT TTGAAAACATGTGTAATATAATTTTAGGTCCTAACTCGTGATTTCGCCACGAAACAGAGTGCGGGAGGGAAGATTGGGGT TTCGGAGGGAAAATTTTGAGTTTCCCTCCCTCGTTCTTCTCTTCCCTCTTCAATCCCCCATCCAATCACTACTATTCCAT TTCCATTTGCTCTCACATCAACAATGAAGTTCAAGGCGTTTCTTACAGAAAACGGAGTGATCCTACTAGAACGTCGATTC ATCCCCGCACTCGAAAAAATGGGAAAAACCTGCCACCTCTACCTCACCAAAGACCACGCAATCTTCCTCCACAACCTCCT CAACGGCGACGGAATCCAATCCATCGCACAATTCCGCAAAGAAGCCCTCTTCGACGACTACCGCATCTCCAGTCAAAACG ACGACCGCATCGCCTTCTCCATCGACCTCTCCCTCCTCCTCCGCGCCCTCCGCAGCAGCGTCGCCGTCTCGTCACAATAC TCCGCCGCCTCCGCTGCTAACCCTAACCGTCTTCAGATCAAGCTTGTTAAGAAGCTTCCGCCTAATTCGACTAATCCCAC GCCGTTCCTCACGTTTGAGACAAGTGGATTTAAATCTGCTGTGATTCAGGATATTCCGATCTCGAAGCCGTTGTCTAGAG CTCAGGTTGTTGAGCTTCAGAATGCTCTTGATTTGGCTCAGGATCTTCCTCAGACACTGCTTCAGGTATATTAGGGTGTG TTGTTCTTGTGAAAAGGTTAATTGATTATTCGTTCTTTCGAAGTAGGTTCTAATCGTTTATGCTATAAGATAAACTCATA TATAAGTTCTTGCAAACGCAACGTTACTACTATCTACCGATTTCCTTTGTTGCGCTTAGTTCGTTCGATAATCGACTAGT TCTCTAAGCAAACAAGTAGTTATTATTTAATTAGTTTGTTTATTGAGTCGACGAACACAGTTTTGGGTTCGGCGAAGAGA GGTAGAGGGAGACCAAAAAAAACTTGGGAAGATATTGTCAAGGATGATTTCATATCCCTCATAATTTAGTTTTTTATCGA GCTCAGTGGCGTAGAGTGATCCATATAGCTGACTTCACTTAGTTGGATAAGACTTTTGTTGTTGTTGTTTGCTGGGTTGG CGTTTAGTTACTAGTCTGTTCAGGTCGTATGGTTAGTTTTTAACCGCAGCTCGTCAAGCAGGCTATGTTTGGATACTCGT TGGTCTCACTGCAAACAGATGTTAGCATGTCTTAAAGGGAAAAGGTGAGCGTAACTCTTTTTACATATTGAGATGAAAGT TCGTTTACCTTGCGCTCAATTGTTAACAAAACATACACGTAGTTGTTAGTTAGTTTGTTTGCTGGGCCTGCATTTAGTTA CTAGTTTGTTCATGTTGTTCTGGTTAGTTAGTCACAGCACGTCAGTCAGTTGTTTGTGACTTAATTTCAGTTATTCTTGC TCTTTGTTTGTTCATTGAGTTCTCACTTGGAATGCAGGTGCCTGATTTGATTCAGATGCTTAATTTTGTGGACCGGATGA AGCATGTGGGAGATGTGGTGAATGTGTTCATAAGCAAGTATGGGGATTTGAGGGTGCAGGTTTCGACCACGTTGATCAGC CTCGGTGCCGAGTTTCGAAACCTGTTGGTGATCGGAGAGCAGGCCAATGCTCCTGCTGAGGATCAAAACCTCACCGCTCA GACGCGCTCAGCGAGGTCAATTCTGAGAGGAGATGCTCAGTCTGTGCAGGTGAGTGTGAAGCATTTCGCCAAGAGTCTGC AGTGTCACCTGGCCAAGCCGGATTGCGCTTTCTATGGGGTTGCTCCTCAGGGAAGTTGTTTGACGGTGATATTCCAGTTC TTTGTCCCTGGTACTCGCCACACTGATAAGTCAATCAGCTTACATTGCAGGCTTCCTGTCCTTGACCCTGGTACTGGTTA AACTCCCTACACCCTCATGGTTGTGTGTAAATCCTTTCTTGTTAAGCTTAGAAATTCTGTTGGCAAAATAGTAAGAGTAA CTGATGTGCCAAGCTCTTAACTAGATATCAAGTTGATTTTTTGTATTCAATGCCAAGTTTACATTATGTGTATGATAGTT ATATGGTTAGAGTAACATGAAGGATATAGGACTGAGAAGTTGTTTTAGCAGTATTGTTCACTTCTAGCAGTGTCATCTGG TTAACAGGCAAATAATAACTTGGCAACATTCCTATCATTCACAAAAAGTACAAACTAGAGTCAGAGGGACCAAAAGTATG GTTCCTTACCAAGGTGAACATGATAGAAACTAGAGAAAGTTGTTCTGTGATCATTCTCAATCTCATTGAGTGAAAAGTGA GTCAATATCCTTTTGTAAGTTCAACCAGTTCCCTTATACATTTCATGGTGCTTCAACTAATTTAATCCAGAGTAGTTTCA ACTGTCAACTAAGAAATACTCCCTCCGTCCTGCATTTTAAGACCCCTTATTATAATGGGGGGTAGAGGAAGTAACTATTT TAACAATCATTAACTAACTAAATTGTTGTTTTGTGATGCTCCCTCTCTAGCCAGGAGATAATTGAGTATCCCTAACTGGG GCATAAATATTCGGGAGTGGTCTAGTTAGTGGATCAACTAGTTGATATGATTATATCATTATATGAATGACCAGGGACTA GCTTAGGAACTTAGATTGGATATGCTTGTAGATGAAATGACTACCAATGTCCACATGTTTGAACCTCTCGTCAGATGATG TATTGCTAGCAAGGTGTATCACGGATTTGTTTTTGCAAAAGACCATGGCTGAGGAAGATGGAATCTCAAATGATCTTAGG ATTTGATTTTAAAACCATAATTTATCACTGGGAAGAGCTATTAATGTCCGATATAGGTTCTGCTGAAGATTTTGAGACTG TCTTGTTTCTTTTCCTTCAAAGTAATCAGAAGCTTAATAAGACAAACTAAGCCTTTACTTTGTCAAATTAGATTGGATTG AAATTTCTCATTAGAGCCTTAAGCCACTTATATCAAAAATATTACTAGACCCAAAAGAGAATAACAAAATCCACCCTCAA ATTCGCATCAGATTACAAGTCACGTTCACTCTAATGAAGAAAACATATTACATTCTAAGTTTAAGTCCGTCTAATATGGC TGGTAATTGTATTCAAAAATAAATGTGACGCCCATTTAAAACGTAAGTCCTGTCTAATATGGCTTTTATAAGACAATGCC AAGCTTGGACATGTTTGTATTGTTATTATTGTTGTATCATATACGAGGGTGGAGCTAAAATTTGTGAGGCAGACAGGCTA TATTGGTTTTCTCGATAAATAATTTACAACTCCGTTTTTTCATCAATTATTGGCATAAATTAGTAATATACAACACATGT CATATGTGTTCTTTTGGTTGGTAAGAACATGACACTTCTCATAATTTTATATTCGATTCTCGCTATCCTGCAAGTACCTT CTATAAGCGACCTATAATCTCAGATGCATACACTAATCTGTATTCTATTCTCGCTGTCCTGCAAATACCTTCTATAAGCG ACCTAAAGTCTCAGATGTATACTCTAATCTGTGGTCCTGACCGGAGCCGAACCCACCCAAACCATCCTAAGATTATTGAT GTGATGCTCGAAAATCTGGTGACAATTGCAGGTAAGCTCTTTTTTATTAATTACACACCCCACCCCAACCTCATCTTTTT ATTTTTCAATTTAAAACATGTATAAATAGCCAAAAATGAGTTTGAAAAAGCAACCCCTTTTTCGTTGACATCAATTTTGG ACCCAGAAACAGTGGAAAGTAAAATACAGTGATGCTACATGCACATGGACAAGGCCCTACCTACTAGTTGAAAAGCATAG ATTACTACATTCCCGCAGTTTCCGCATTTGAATTCTCCAATAAATTAAACTAAACAGGTTGGTGACATAATTTCTTATCA AACAGCAATACATTTTGAAAATCAAACACCAAGCACTACCTAACTTGAAACATCACCCTTTGACCTATTTGAAGTCAACA ACATCCAATATCACCACCATCCAAACAACAATTACCTTCAGCAAAATAAAAGAAGGAGAAAAAAAATGTGAAACACAACA TGAACATCACCCATTTGGGATTATTTCAGGATGTGAATTGTGGTCTGAATATCATGGAATAACACTGCCAATTACCGTGA ATAAATGAATGCATCCCATGCTGCTCCAATGGCAAAAACAACAGGCATGAGAAGAATGGCCCCTCTAGAGGAAAGGCTTG GTGCCCCAGCTTTTTCAGGGGCAGCTTTGGGTGGAGGTGGTAGCTTTTCAACACGAACGGCTAACTTCATGCCGCCATAG CAGAACCCATTGCCGCTGATAAAGTAGTAATGACGGGTCACATTCAAAGGAACCACATCTCTTCCAGCTCCTGTGGTCCA ATTGTGGATTGGATGCTCAGCAATGCAATTTTCATAATTCGTCTTGTTCACTTCTAGCACATTCATCTGGTTCCTATCAT ACACAAAAACTGGTAAACTAACCACAGTTAGTATCAGGTTAAGCAGAAATTAATGACTTGGCAACATTCCATCATTAGGT TGGAACTAGAAATTAAGAGAGACACAAGTTTGTTCATTGCAGTTGCAAACAACTGTTAGTGTGCTTCCATTAGATATATT ATAAAAAACCAAGACCCTTATGAAGCTATAACTGGTATTTTGCTTTTCGTTTGCAAATTAAGCCATAAATTGAGGAGGAA AGTTCTTAATATTCTACTTTTTATTTTTCCTGAAATATGGATGTGACACTCCGTTTAACACTTTTTTGTGTGTTTAAACC ACAACTATCCTCAATAGAGACAATCGTATTCGAGCCGCATATGACATCTATGGATGGCAAAGCTCTTTCTAGCAAGTATT TAATGCAGCTGAATTAAGCCATAAATTGAGGAGGAAAGTTCTTATTATTCTACTTTTTTTTTTGCTGAGATATGGATGTG ACCCTCCGTTCAACACTTTTGTGTGTGTTTAAACCACAACTATCCTCAATGGAGACAATCCTATTCGAGAGTCGAGACGC ATATGACCTCTATGGGCGGCCAAACTCTTTCTACCAAGTATTTAATGCAGCTGCATTCACAGAGACTAGAACCCAAAAAC TTTGCTTAAGTTCACTTTAACTTGTTACCTAAGGGTCAATTAGTCAGTTAGAAACTTGAGCACTAATTCATGATATTCAG CAGCATAACAAAGCATACTAAAATACCTAAAATTGTTTACAAGTTGAAAAATATCTGCAACTTCCTATATATGCTTCACA TTGCAAATGCTTGATTGATAGAATATGCCTGACTTTTGTGTCCCATTGATTGTGCCATGTTTTCTGACCTTATCTACAGT ATTATTGGTAACAAAGACCCAGAACTTAGATCACTAGGGAAAGAAAGTGCAAGAAGAAAAGTAGTGACAAACACAAATTA AGTTACAGACTTATTACAGTCATAAATTTATTAATTAAAACAAGCTCAACAAAGAGAAAATAAGGGCTTTTTGGTTTTAC TGAAACATGATAGGCATGAATAAGCACCAAAATATAGAAGCCATCAATAGAAGCAGCCAAAAGCTATGGATCTGAGAATG CAGAAAAACAAAATAACAGGATAAAAAAAAGGATCCAAACACACTGATTTTCTAATATACAGTCTCTCTTGACAGAAAAC AGTAAATAAACAATGAAAAAAAATAGGGAGGGAGAAGAGAATTCCAGATGGCATTGCCCTCAAAATCTCAACTTTTTTCA CTGTTAATTTCCAATTTTAACAAAACTTAAATTCAGATGAACTGACAAACAGTAACACATCAAAATTCTTCAAATCTAGC ACAACATGACAATTTTCTTCTCTTTTCTTTCCACAAATTAAGTACAGGCAGCATAGATTTAGACCCTCTTGGTTCACAAA ACAACAAATTAAGTAGCAAAAACAAAAAAAATCTGAAAACTTTAGCATATATCATACTCAAACATGTTCAGATCCAATCC AGAACCCAGATAGAGGAAGCAGAAACAACAAATTATGAAAGCAAAGATTGAAACTTTAAGTCAAATCATCGAGAGAGAGA GAGAGAGAGAGAGAGCTTACAGAGCCAGTCATCAATGTAGAAATGCTTGTCCCTGGCCCATACAGTGTAGTTAACATTGG GGTTCCAGAATTTGCCATCACCGACCAGCCACCGTTTAGCTGAGACCTCTGGGACCATGAGAAGCACAGCAAAACCAAGG AAGAGAAGCACCATGGCTGGTGACCCCAGCATCTTCTTCTTCACCCTCTCCATGAATGAATGTTCTGTTCTGTTCTGGAG CTACCTTTGTTCAAAACTCTGGAACACTCTTGTCTGTTGTCTCTGTTCTAATATGTGCTGTTTTTTTTG
CDS sequence (LotjaGi2g1v0262500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTCAAGGCGTTTCTTACAGAAAACGGAGTGATCCTACTAGAACGTCGATTCATCCCCGCACTCGAAAAAATGGG AAAAACCTGCCACCTCTACCTCACCAAAGACCACGCAATCTTCCTCCACAACCTCCTCAACGGCGACGGAATCCAATCCA TCGCACAATTCCGCAAAGAAGCCCTCTTCGACGACTACCGCATCTCCAGTCAAAACGACGACCGCATCGCCTTCTCCATC GACCTCTCCCTCCTCCTCCGCGCCCTCCGCAGCAGCGTCGCCGTCTCGTCACAATACTCCGCCGCCTCCGCTGCTAACCC TAACCGTCTTCAGATCAAGCTTGTTAAGAAGCTTCCGCCTAATTCGACTAATCCCACGCCGTTCCTCACGTTTGAGACAA GTGGATTTAAATCTGCTGTGATTCAGGATATTCCGATCTCGAAGCCGTTGTCTAGAGCTCAGGTTGTTGAGCTTCAGAAT GCTCTTGATTTGGCTCAGGATCTTCCTCAGACACTGCTTCAGGTGCCTGATTTGATTCAGATGCTTAATTTTGTGGACCG GATGAAGCATGTGGGAGATGTGGTGAATGTGTTCATAAGCAAGTATGGGGATTTGAGGGTGCAGGTTTCGACCACGTTGA TCAGCCTCGGTGCCGAGTTTCGAAACCTGTTGGTGATCGGAGAGCAGGCCAATGCTCCTGCTGAGGATCAAAACCTCACC GCTCAGACGCGCTCAGCGAGGTCAATTCTGAGAGGAGATGCTCAGTCTGTGCAGGTGAGTGTGAAGCATTTCGCCAAGAG TCTGCAGTGTCACCTGGCCAAGCCGGATTGCGCTTTCTATGGGGTTGCTCCTCAGGGAAGTTGTTTGACGGTGATATTCC AGTTCTTTGTCCCTGGTACTCGCCACACTGATAAGTCAATCAGCTTACATTGCAGGCTTCCTGTCCTTGACCCTGGTACT GGTTAA
Protein sequence (LotjaGi2g1v0262500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFKAFLTENGVILLERRFIPALEKMGKTCHLYLTKDHAIFLHNLLNGDGIQSIAQFRKEALFDDYRISSQNDDRIAFSI DLSLLLRALRSSVAVSSQYSAASAANPNRLQIKLVKKLPPNSTNPTPFLTFETSGFKSAVIQDIPISKPLSRAQVVELQN ALDLAQDLPQTLLQVPDLIQMLNFVDRMKHVGDVVNVFISKYGDLRVQVSTTLISLGAEFRNLLVIGEQANAPAEDQNLT AQTRSARSILRGDAQSVQVSVKHFAKSLQCHLAKPDCAFYGVAPQGSCLTVIFQFFVPGTRHTDKSISLHCRLPVLDPGT G
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 315 | 315 | 3.7E-86 | – | |
| Gene3D | 1 | 315 | 315 | 4.1E-56 | – | |
| PANTHER | 1 | 315 | 315 | 3.7E-86 | – | |
| Pfam | 1 | 300 | 300 | 1.2E-68 | ||
| PIRSF | 1 | 301 | 301 | 7.6E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | DNA damage checkpoint | A cell cycle checkpoint that regulates progression through the cell cycle in response to DNA damage. A DNA damage checkpoint may blocks cell cycle progression (in G1, G2 or metaphase) or slow the rate at which S phase proceeds. | ||
| Cellular component | Nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. | ||
| Cellular component | Checkpoint clamp complex | Conserved heterotrimeric complex of PCNA-like proteins that is loaded onto DNA at sites of DNA damage. |
Expression pattern of LotjaGi2g1v0262500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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