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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0273900 |
| Transcript ID | LotjaGi2g1v0273900.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase, putative; TAIR: AT4G17770.1 trehalose phosphatase/synthase 5; Swiss-Prot: sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 5; TrEMBL-Plants: tr|I1NFN9|I1NFN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74520604..74525197) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAATTCTGAAATTACATGAGAAATTTGGTTCTAGAAAAGTAGAAAATAAATAGGCAAATGTCACATTTCATTGTTTG TTTTTGTAGCCAAATAATCAAACACGTTACTCAATACTCACGTTTGACACCATTGCTCAATAAGGTTCGCGTGAGACAAC TGATGACACAAAAAGGAACCAGAATCTTTGGTCTCATGTGCCACCTCGCCTAACCTTTCTTCACTCCTTCAACGGTAGGC GTTTCTTTCACTCCTTTTCTTCATTCCTTCATTGTGTGTGCTGTTTTTAGCTCACTTACCTTTTCTGAGCTTTCTATGTT CATCAATGGCAAATGGGTAATCGTGCATTTGGATATATCTTGCTGTTTCAGCTGATTTAAGGTTTCACTCACACTCTGAT TGCTATCTTAAAGTTGCTTCAACTCTCAGTGATTCTATATATGTGATTTTTCTGGTAGGTAAGGTTTGTTTGTTGTATAT GATGTTTTGTTAGATTTAGCTTAAGGGTATTGATTGTTCAATCTAGGATTTTCCCAAATTGATCTTATAGGGTGCTTTTG TTGTAGATGGTGTGTTAGGCTTCAAAATCTATTTTATTGAATGTTCTTTAAGTTCTCTGTCAAACTTAGCTGAAAGGGGT TTAATTTGAGATTTATCCCCTTTTCTCATAGGGCTAAATGTTGAATCTTTTGAAATCTTGAGACAAAAAGCCTCTTTTTT TTTTATTACTTTTTATGGATTTTTATGGTTTCAGATTTCTGAAGTTTCAACCTTGCTCTGGTGGTTTGGAGGAGTTGATT GTGAACTTTGAAGTATCAGTATAAGCCTTGTTTATACATCTGGTCCACCAAGGTCCTTTGGTTGTCACCATAATGGTTTC GAGGTCGTATTCTAACTTGTTGGATCTTACTTCATGTGGCTCCCCATCTTTTGGTCGGGAAAGGAAAAGGTTTCCTCGGG TGGCCACTGTTGCTGGTGTTCTGTGTGAGCTAGATGATGATACCAACAGTGCTGGTTCTGATGCTCCCTCTTCCATCTCT CAAGAAAGGATGATCATTGTGGGTAATCAGCTTCCTTTACGAGCTCACAGGAAAGATAATGGCACGTGGGACTTCGCCTG GGATGAGGACTCGCTCCTTTTGCAGTTGAAAGATGGTCTTGGGGAGGATGTGGAAGTTATCTATATTGGTTGTCTCAGGG AAGAAATTGAGCCAAAGGAGCAAGATGATGTTGCTCAGTACTTGCTTGACAATTTCAAATGTGTGCCCACGTTCCTCCCT CCTGATCTTTTTAGTAAATTTTATCATGGATTCTGCAAACAACACCTGTGGCCTTTATTTCACTACATGCTTCCGTTATC ACCTGATCTCGGTGGCCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCCGTGAACAAGATATTCGCAGACAAAGTGA TGGAAGTCATTAGCCCCGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTCCCCACATTTTTGAGAAAG AGGTTTAACAGGATGAGGCTTGGATTCTTCCTTCATAGTCCATTTCCTTCCTCTGAGATATATCGAACACTTCCTGTTAG GGATGAACTTCTCAGAGCTCTTCTGAACTCTGATCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTTCCTCTCCT GTTGCAGTAGAATGCTTGGGCTTTCTTACCAGTCCAAGCGTGGCTACATTGGTATTGAGTACTATGGTAGAACTGTTAGT ATTAAGATTCTTCCTGTTGGCATTCATATTGCACAGCTTCAATCTGTCATGAATCTTCCTGAGACAGAAAGAAAGGTTGC AGAATTACATGATCAGTTCAAAGGACGAACTGTGCTTCTTGGGGTTGATGACATGGATATCTTCAAAGGAATCAGCTTAA AACTTTTAGCTATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCGAAGTTGTTCTGGTCCAAATTGCCAACCCT GCAAGAGGCCGGGGGAAGGATGTCCAGGAGGTACAAAGTGAAACTTATGCTACAGCAAAAAGGATAAATGATAAATTTGG AAGGTCTGGATACACACCTGTAATCTTGATTGATACACCACTCCAATTTTATGAGCGAATTGCCTATTATGTGATTGCAG AATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATTCCCTATGAATATATCATATGTAGACAAGGAAATGAG AAGCTAGATGAGATTTTAGGGATTAACACATCTACAGAAAAAAAGAGTATGCTGGTTGTGTCTGAGTTCATTGGGTGCAC CCCATCACTAAGTGGGGCAATTCGAGTCAATCCATGGAATATTGATGCTGTTTCTGAAGCTATGGATACTGCCTTAATGG TCCCAGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACTCATGATGTTGCATATTGGGCACGT AGCTTCTTGCAGGATCTGGAAAGGGCATGTAAGGATCATCTCAGGAGGAGATGCTGGGGTATTGGTTTTGGTTTAGGATT TCGAGTAATCGCTGTAGACCCAAATTTCAGGAAGTTATCAGTTGATCATATTGTTTCAGCTTATAAGAGGACCAAGCACA GAGCAATTCTATTGGATTATGATAGTACCATGATGCAACCTGGATCAATCAGCACAGCACCAAATTCTGAAGCTGTAAGC ATCTTGAACAGCTTGTGCAGGGACACCAAGAATGTTGTTTACATAGTCAGTGCAAAGGAGAGAATGATTCTTACTGAATG GTTTTCTTCTTGTGAAACTCTGGGAATTGGTGCAGAGCATGGTTTTTTTGTGAGGTTTGTCCTTTTTCCTTCTATGTATG TGTGTCAGTCTGTCTATTGAGGGAGAGTCTAGACTAGAAACGGTGACACTGTTTTTTCAGAAGTGAATTGCTTTTGGATT ATCTAATTCCCTTGGAACTAATCTTATTTACATTGAGTATTACAAGAAACCCATATGGAAAAAGAATCAATGAATGGCAT TAAAAGACCAACCTTAGAATTTTCTTATTTATTTGTGTTCATCTTTTGTGTTGCATTTGGTAGGATGAAATATGCATATC TTCATGTTATTATAGAAGGGCTACTGTTGAGGAAAAATAAAAGGAGATATATTTCTTTGAAGAGCCTGCTTGTGTGCTCA AATTTAAGTCTATCCTTTCTGTTTTCCAGGACAAATCGAGATGCAGAATGGGAAACTTGTGTTTCTGTTCCAGATTTTGA CTGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAAACAACCGATGGCTCTAACATAGAGGCCAAAGAGAGTG CTCTCGTTTGGAATTACGAGTACGCTGACCGAGACTTCGGTTCATGCCAGGCTAAGGAGCTTTTAGATCATCTTGAAAGT GTTCTCTCTAATGAGCCTGTTTCTGTTAAAAGTAGTTCAAACGTTGTGGAAGTTAAACCTCAGGTAAGTAATCAATCAAT CTCTCTACTTCTAATCTATATTGGAACATGCAGAACAACATTGATTCCACTTCCACAGATCTTTTACGGGTTGATGAATA CCTTTGGTCAGGCAAAATGTGAAATGTCCTCCTTTTTACTAAGATCCTCGATGACCTAATGTTCACTACTATTTTTTTCT AACTAACACAAATGGTATCCAATTTTCATGTATTGATGCCTATCCTCCACTGTTAACTATCTTCCTTCAAATCCTCAACT TGATTTACAGGGTGTGAACAAGGGCATTGTAGCAGAACATCTTCTCTTAAGGATGCAACAAAAAGGAGTACTCCCGGATT TTGTTTTATGCGTTGGGGACGACAGATCTGATGAGGACATGTTTGAGGTTATAACAAGTGCAAAAGCCTCACTTTCTCCA GTCGCCGAAGTGTTCCCTTGTGCCGTTGGGCAGAAACCTAGTAAGGCCAAGTATTACTTGGAAGACCCAAGTGAGATTCT GAGAATGCTGCAAGGCCTGTCTAATGCTTCTGAAAAGTCTGCTAGAAGTTCTTCCCTGTCTTCTCCTTAAGCTTTTTGGT ATCTAGCATACTTTCTCCAGAGGCTCTAATCTATATTGGGGTGTGCTCTTCAGATTTCTTGACCATCTTAATATGCAGAA GTTATCCCAACATCATTACCAACTACCAAATGTATCTAGGTTTTGTGTTGGCAAGTTGATAAAGCATGTAGTGGAGCTAT TGGTTCTAATCTCTAATATCTGCTCTGACCATTTTAATGTAAAATAAAGTGATTCTTAGCTTGGAATGAATTATGAGATT GTTAATGCACTATATCAAGTGCATATTCGATAGTGATAAGGACCATGCTGGACTAGAGTACAGATGCTCTTGTAAAATTT GCAAGCACTTCTGTTTCTTGTGTTATTCTGTTAGTAAACAATGCAAGCTCTCTTTGGTTTTACCACCTATTTGATATAGG GTGGCAGCTTCTAAATTACTGAATTGAATAAAACTCAACATTTGTGTAGTATCTATGGTTTTACCACCTATTTGATAAAA GGAATTCTTCTTAGTAAAACTCAACATTTCAAAG
CDS sequence (LotjaGi2g1v0273900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCGAGGTCGTATTCTAACTTGTTGGATCTTACTTCATGTGGCTCCCCATCTTTTGGTCGGGAAAGGAAAAGGTT TCCTCGGGTGGCCACTGTTGCTGGTGTTCTGTGTGAGCTAGATGATGATACCAACAGTGCTGGTTCTGATGCTCCCTCTT CCATCTCTCAAGAAAGGATGATCATTGTGGGTAATCAGCTTCCTTTACGAGCTCACAGGAAAGATAATGGCACGTGGGAC TTCGCCTGGGATGAGGACTCGCTCCTTTTGCAGTTGAAAGATGGTCTTGGGGAGGATGTGGAAGTTATCTATATTGGTTG TCTCAGGGAAGAAATTGAGCCAAAGGAGCAAGATGATGTTGCTCAGTACTTGCTTGACAATTTCAAATGTGTGCCCACGT TCCTCCCTCCTGATCTTTTTAGTAAATTTTATCATGGATTCTGCAAACAACACCTGTGGCCTTTATTTCACTACATGCTT CCGTTATCACCTGATCTCGGTGGCCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCCGTGAACAAGATATTCGCAGA CAAAGTGATGGAAGTCATTAGCCCCGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTCCCCACATTTT TGAGAAAGAGGTTTAACAGGATGAGGCTTGGATTCTTCCTTCATAGTCCATTTCCTTCCTCTGAGATATATCGAACACTT CCTGTTAGGGATGAACTTCTCAGAGCTCTTCTGAACTCTGATCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTT CCTCTCCTGTTGCAGTAGAATGCTTGGGCTTTCTTACCAGTCCAAGCGTGGCTACATTGGTATTGAGTACTATGGTAGAA CTGTTAGTATTAAGATTCTTCCTGTTGGCATTCATATTGCACAGCTTCAATCTGTCATGAATCTTCCTGAGACAGAAAGA AAGGTTGCAGAATTACATGATCAGTTCAAAGGACGAACTGTGCTTCTTGGGGTTGATGACATGGATATCTTCAAAGGAAT CAGCTTAAAACTTTTAGCTATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCGAAGTTGTTCTGGTCCAAATTG CCAACCCTGCAAGAGGCCGGGGGAAGGATGTCCAGGAGGTACAAAGTGAAACTTATGCTACAGCAAAAAGGATAAATGAT AAATTTGGAAGGTCTGGATACACACCTGTAATCTTGATTGATACACCACTCCAATTTTATGAGCGAATTGCCTATTATGT GATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATTCCCTATGAATATATCATATGTAGACAAG GAAATGAGAAGCTAGATGAGATTTTAGGGATTAACACATCTACAGAAAAAAAGAGTATGCTGGTTGTGTCTGAGTTCATT GGGTGCACCCCATCACTAAGTGGGGCAATTCGAGTCAATCCATGGAATATTGATGCTGTTTCTGAAGCTATGGATACTGC CTTAATGGTCCCAGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACTCATGATGTTGCATATT GGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAAGGATCATCTCAGGAGGAGATGCTGGGGTATTGGTTTTGGT TTAGGATTTCGAGTAATCGCTGTAGACCCAAATTTCAGGAAGTTATCAGTTGATCATATTGTTTCAGCTTATAAGAGGAC CAAGCACAGAGCAATTCTATTGGATTATGATAGTACCATGATGCAACCTGGATCAATCAGCACAGCACCAAATTCTGAAG CTGTAAGCATCTTGAACAGCTTGTGCAGGGACACCAAGAATGTTGTTTACATAGTCAGTGCAAAGGAGAGAATGATTCTT ACTGAATGGTTTTCTTCTTGTGAAACTCTGGGAATTGGTGCAGAGCATGGTTTTTTTGTGAGGACAAATCGAGATGCAGA ATGGGAAACTTGTGTTTCTGTTCCAGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAAACAA CCGATGGCTCTAACATAGAGGCCAAAGAGAGTGCTCTCGTTTGGAATTACGAGTACGCTGACCGAGACTTCGGTTCATGC CAGGCTAAGGAGCTTTTAGATCATCTTGAAAGTGTTCTCTCTAATGAGCCTGTTTCTGTTAAAAGTAGTTCAAACGTTGT GGAAGTTAAACCTCAGGGTGTGAACAAGGGCATTGTAGCAGAACATCTTCTCTTAAGGATGCAACAAAAAGGAGTACTCC CGGATTTTGTTTTATGCGTTGGGGACGACAGATCTGATGAGGACATGTTTGAGGTTATAACAAGTGCAAAAGCCTCACTT TCTCCAGTCGCCGAAGTGTTCCCTTGTGCCGTTGGGCAGAAACCTAGTAAGGCCAAGTATTACTTGGAAGACCCAAGTGA GATTCTGAGAATGCTGCAAGGCCTGTCTAATGCTTCTGAAAAGTCTGCTAGAAGTTCTTCCCTGTCTTCTCCTTAA
Protein sequence (LotjaGi2g1v0273900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSRSYSNLLDLTSCGSPSFGRERKRFPRVATVAGVLCELDDDTNSAGSDAPSSISQERMIIVGNQLPLRAHRKDNGTWD FAWDEDSLLLQLKDGLGEDVEVIYIGCLREEIEPKEQDDVAQYLLDNFKCVPTFLPPDLFSKFYHGFCKQHLWPLFHYML PLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRMRLGFFLHSPFPSSEIYRTL PVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGIEYYGRTVSIKILPVGIHIAQLQSVMNLPETER KVAELHDQFKGRTVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGEVVLVQIANPARGRGKDVQEVQSETYATAKRIND KFGRSGYTPVILIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDEILGINTSTEKKSMLVVSEFI GCTPSLSGAIRVNPWNIDAVSEAMDTALMVPESEKKMRHEKHYRYVSTHDVAYWARSFLQDLERACKDHLRRRCWGIGFG LGFRVIAVDPNFRKLSVDHIVSAYKRTKHRAILLDYDSTMMQPGSISTAPNSEAVSILNSLCRDTKNVVYIVSAKERMIL TEWFSSCETLGIGAEHGFFVRTNRDAEWETCVSVPDFDWKQIAEPVMQLYMETTDGSNIEAKESALVWNYEYADRDFGSC QAKELLDHLESVLSNEPVSVKSSSNVVEVKPQGVNKGIVAEHLLLRMQQKGVLPDFVLCVGDDRSDEDMFEVITSAKASL SPVAEVFPCAVGQKPSKAKYYLEDPSEILRMLQGLSNASEKSARSSSLSSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 847 | 847 | 0.0 | – | |
| PANTHER | 1 | 847 | 847 | 0.0 | – | |
| Gene3D | 51 | 315 | 265 | 5.1E-78 | – | |
| SUPERFAMILY | 59 | 547 | 489 | 8.9E-153 | – | |
| Pfam | 59 | 543 | 485 | 2.1E-186 | ||
| CDD | 59 | 543 | 485 | 0.0 | – | |
| Gene3D | 316 | 528 | 213 | 4.6E-74 | – | |
| TIGRFAM | 588 | 835 | 248 | 2.3E-31 | ||
| Gene3D | 589 | 698 | 110 | 1.2E-6 | ||
| SUPERFAMILY | 590 | 835 | 246 | 2.81E-40 | ||
| CDD | 591 | 827 | 237 | 2.22336E-51 | – | |
| TIGRFAM | 592 | 793 | 202 | 4.3E-13 | ||
| Pfam | 593 | 826 | 234 | 2.0E-71 | ||
| Gene3D | 715 | 848 | 134 | 3.4E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi2g1v0273900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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