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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0273900 |
| Transcript ID | LotjaGi2g1v0273900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase, putative; TAIR: AT4G17770.1 trehalose phosphatase/synthase 5; Swiss-Prot: sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 5; TrEMBL-Plants: tr|I1NFN9|I1NFN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74520619..74525119) extracted from Lotus japonicus Gifu genome v1.2.
TGTTTTTGTAGCCAAATAATCAAACACGTTACTCAATACTCACGTTTGACACCATTGCTCAATAAGGTTCGCGTGAGACA ACTGATGACACAAAAAGGAACCAGAATCTTTGGTCTCATGTGCCACCTCGCCTAACCTTTCTTCACTCCTTCAACGGTAG GCGTTTCTTTCACTCCTTTTCTTCATTCCTTCATTGTGTGTGCTGTTTTTAGCTCACTTACCTTTTCTGAGCTTTCTATG TTCATCAATGGCAAATGGGTAATCGTGCATTTGGATATATCTTGCTGTTTCAGCTGATTTAAGGTTTCACTCACACTCTG ATTGCTATCTTAAAGTTGCTTCAACTCTCAGTGATTCTATATATGTGATTTTTCTGGTAGGTAAGGTTTGTTTGTTGTAT ATGATGTTTTGTTAGATTTAGCTTAAGGGTATTGATTGTTCAATCTAGGATTTTCCCAAATTGATCTTATAGGGTGCTTT TGTTGTAGATGGTGTGTTAGGCTTCAAAATCTATTTTATTGAATGTTCTTTAAGTTCTCTGTCAAACTTAGCTGAAAGGG GTTTAATTTGAGATTTATCCCCTTTTCTCATAGGGCTAAATGTTGAATCTTTTGAAATCTTGAGACAAAAAGCCTCTTTT TTTTTTATTACTTTTTATGGATTTTTATGGTTTCAGATTTCTGAAGTTTCAACCTTGCTCTGGTGGTTTGGAGGAGTTGA TTGTGAACTTTGAAGTATCAGTATAAGCCTTGTTTATACATCTGGTCCACCAAGGTCCTTTGGTTGTCACCATAATGGTT TCGAGGTCGTATTCTAACTTGTTGGATCTTACTTCATGTGGCTCCCCATCTTTTGGTCGGGAAAGGAAAAGGTTTCCTCG GGTGGCCACTGTTGCTGGTGTTCTGTGTGAGCTAGATGATGATACCAACAGTGCTGGTTCTGATGCTCCCTCTTCCATCT CTCAAGAAAGGATGATCATTGTGGGTAATCAGCTTCCTTTACGAGCTCACAGGAAAGATAATGGCACGTGGGACTTCGCC TGGGATGAGGACTCGCTCCTTTTGCAGTTGAAAGATGGTCTTGGGGAGGATGTGGAAGTTATCTATATTGGTTGTCTCAG GGAAGAAATTGAGCCAAAGGAGCAAGATGATGTTGCTCAGTACTTGCTTGACAATTTCAAATGTGTGCCCACGTTCCTCC CTCCTGATCTTTTTAGTAAATTTTATCATGGATTCTGCAAACAACACCTGTGGCCTTTATTTCACTACATGCTTCCGTTA TCACCTGATCTCGGTGGCCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCCGTGAACAAGATATTCGCAGACAAAGT GATGGAAGTCATTAGCCCCGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTCCCCACATTTTTGAGAA AGAGGTTTAACAGGATGAGGCTTGGATTCTTCCTTCATAGTCCATTTCCTTCCTCTGAGATATATCGAACACTTCCTGTT AGGGATGAACTTCTCAGAGCTCTTCTGAACTCTGATCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTTCCTCTC CTGTTGCAGTAGAATGCTTGGGCTTTCTTACCAGTCCAAGCGTGGCTACATTGGTATTGAGTACTATGGTAGAACTGTTA GTATTAAGATTCTTCCTGTTGGCATTCATATTGCACAGCTTCAATCTGTCATGAATCTTCCTGAGACAGAAAGAAAGGTT GCAGAATTACATGATCAGTTCAAAGGACGAACTGTGCTTCTTGGGGTTGATGACATGGATATCTTCAAAGGAATCAGCTT AAAACTTTTAGCTATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCGAAGTTGTTCTGGTCCAAATTGCCAACC CTGCAAGAGGCCGGGGGAAGGATGTCCAGGAGGTACAAAGTGAAACTTATGCTACAGCAAAAAGGATAAATGATAAATTT GGAAGGTCTGGATACACACCTGTAATCTTGATTGATACACCACTCCAATTTTATGAGCGAATTGCCTATTATGTGATTGC AGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATTCCCTATGAATATATCATATGTAGACAAGGAAATG AGAAGCTAGATGAGATTTTAGGGATTAACACATCTACAGAAAAAAAGAGTATGCTGGTTGTGTCTGAGTTCATTGGGTGC ACCCCATCACTAAGTGGGGCAATTCGAGTCAATCCATGGAATATTGATGCTGTTTCTGAAGCTATGGATACTGCCTTAAT GGTCCCAGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACTCATGATGTTGCATATTGGGCAC GTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAAGGATCATCTCAGGAGGAGATGCTGGGGTATTGGTTTTGGTTTAGGA TTTCGAGTAATCGCTGTAGACCCAAATTTCAGGAAGTTATCAGTTGATCATATTGTTTCAGCTTATAAGAGGACCAAGCA CAGAGCAATTCTATTGGATTATGATAGTACCATGATGCAACCTGGATCAATCAGCACAGCACCAAATTCTGAAGCTGTAA GCATCTTGAACAGCTTGTGCAGGGACACCAAGAATGTTGTTTACATAGTCAGTGCAAAGGAGAGAATGATTCTTACTGAA TGGTTTTCTTCTTGTGAAACTCTGGGAATTGGTGCAGAGCATGGTTTTTTTGTGAGGTTTGTCCTTTTTCCTTCTATGTA TGTGTGTCAGTCTGTCTATTGAGGGAGAGTCTAGACTAGAAACGGTGACACTGTTTTTTCAGAAGTGAATTGCTTTTGGA TTATCTAATTCCCTTGGAACTAATCTTATTTACATTGAGTATTACAAGAAACCCATATGGAAAAAGAATCAATGAATGGC ATTAAAAGACCAACCTTAGAATTTTCTTATTTATTTGTGTTCATCTTTTGTGTTGCATTTGGTAGGATGAAATATGCATA TCTTCATGTTATTATAGAAGGGCTACTGTTGAGGAAAAATAAAAGGAGATATATTTCTTTGAAGAGCCTGCTTGTGTGCT CAAATTTAAGTCTATCCTTTCTGTTTTCCAGGACAAATCGAGATGCAGAATGGGAAACTTGTGTTTCTGTTCCAGATTTT GACTGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAAACAACCGATGGCTCTAACATAGAGGCCAAAGAGAG TGCTCTCGTTTGGAATTACGAGTACGCTGACCGAGACTTCGGTTCATGCCAGGCTAAGGAGCTTTTAGATCATCTTGAAA GTGTTCTCTCTAATGAGCCTGTTTCTGTTAAAAGTAGTTCAAACGTTGTGGAAGTTAAACCTCAGGTAAGTAATCAATCA ATCTCTCTACTTCTAATCTATATTGGAACATGCAGAACAACATTGATTCCACTTCCACAGATCTTTTACGGGTTGATGAA TACCTTTGGTCAGGCAAAATGTGAAATGTCCTCCTTTTTACTAAGATCCTCGATGACCTAATGTTCACTACTATTTTTTT CTAACTAACACAAATGGTATCCAATTTTCATGTATTGATGCCTATCCTCCACTGTTAACTATCTTCCTTCAAATCCTCAA CTTGATTTACAGGGTGTGAACAAGGGCATTGTAGCAGAACATCTTCTCTTAAGGATGCAACAAAAAGGAGTACTCCCGGA TTTTGTTTTATGCGTTGGGGACGACAGATCTGATGAGGACATGTTTGAGGTTATAACAAGTGCAAAAGCCTCACTTTCTC CAGTCGCCGAAGTGTTCCCTTGTGCCGTTGGGCAGAAACCTAGTAAGGCCAAGTATTACTTGGAAGACCCAAGTGAGATT CTGAGAATGCTGCAAGGCCTGTCTAATGCTTCTGAAAAGTCTGCTAGAAGTTCTTCCCTGTCTTCTCCTTAAGCTTTTTG GTATCTAGCATACTTTCTCCAGAGGCTCTAATCTATATTGGGGTGTGCTCTTCAGATTTCTTGACCATCTTAATATGCAG AAGTTATCCCAACATCATTACCAACTACCAAATGTATCTAGGTTTTGTGTTGGCAAGTTGATAAAGCATGTAGTGGAGCT ATTGGTTCTAATCTCTAATATCTGCTCTGACCATTTTAATGTAAAATAAAGTGATTCTTAGCTTGGAATGAATTATGAGA TTGTTAATGCACTATATCAAGTGCATATTCGATAGTGATAAGGACCATGCTGGACTAGAGTACAGATGCTCTTGTAAAAT TTGCAAGCACTTCTGTTTCTTGTGTTATTCTGTTAGTAAACAATGCAAGCTCTCTTTGGTTTTACCACCTATTTGATATA GGGTGGCAGCTTCTAAATTACTGAATTGAATAAAACTCAACATTTGTGTAGTATCTATGGTTTTACCACCTATTTGATAA AAGGAATTCTTCTTAGTAAAA
CDS sequence (LotjaGi2g1v0273900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCGAGGTCGTATTCTAACTTGTTGGATCTTACTTCATGTGGCTCCCCATCTTTTGGTCGGGAAAGGAAAAGGTT TCCTCGGGTGGCCACTGTTGCTGGTGTTCTGTGTGAGCTAGATGATGATACCAACAGTGCTGGTTCTGATGCTCCCTCTT CCATCTCTCAAGAAAGGATGATCATTGTGGGTAATCAGCTTCCTTTACGAGCTCACAGGAAAGATAATGGCACGTGGGAC TTCGCCTGGGATGAGGACTCGCTCCTTTTGCAGTTGAAAGATGGTCTTGGGGAGGATGTGGAAGTTATCTATATTGGTTG TCTCAGGGAAGAAATTGAGCCAAAGGAGCAAGATGATGTTGCTCAGTACTTGCTTGACAATTTCAAATGTGTGCCCACGT TCCTCCCTCCTGATCTTTTTAGTAAATTTTATCATGGATTCTGCAAACAACACCTGTGGCCTTTATTTCACTACATGCTT CCGTTATCACCTGATCTCGGTGGCCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCCGTGAACAAGATATTCGCAGA CAAAGTGATGGAAGTCATTAGCCCCGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTCCCCACATTTT TGAGAAAGAGGTTTAACAGGATGAGGCTTGGATTCTTCCTTCATAGTCCATTTCCTTCCTCTGAGATATATCGAACACTT CCTGTTAGGGATGAACTTCTCAGAGCTCTTCTGAACTCTGATCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTT CCTCTCCTGTTGCAGTAGAATGCTTGGGCTTTCTTACCAGTCCAAGCGTGGCTACATTGGTATTGAGTACTATGGTAGAA CTGTTAGTATTAAGATTCTTCCTGTTGGCATTCATATTGCACAGCTTCAATCTGTCATGAATCTTCCTGAGACAGAAAGA AAGGTTGCAGAATTACATGATCAGTTCAAAGGACGAACTGTGCTTCTTGGGGTTGATGACATGGATATCTTCAAAGGAAT CAGCTTAAAACTTTTAGCTATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCGAAGTTGTTCTGGTCCAAATTG CCAACCCTGCAAGAGGCCGGGGGAAGGATGTCCAGGAGGTACAAAGTGAAACTTATGCTACAGCAAAAAGGATAAATGAT AAATTTGGAAGGTCTGGATACACACCTGTAATCTTGATTGATACACCACTCCAATTTTATGAGCGAATTGCCTATTATGT GATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATTCCCTATGAATATATCATATGTAGACAAG GAAATGAGAAGCTAGATGAGATTTTAGGGATTAACACATCTACAGAAAAAAAGAGTATGCTGGTTGTGTCTGAGTTCATT GGGTGCACCCCATCACTAAGTGGGGCAATTCGAGTCAATCCATGGAATATTGATGCTGTTTCTGAAGCTATGGATACTGC CTTAATGGTCCCAGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACTCATGATGTTGCATATT GGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAAGGATCATCTCAGGAGGAGATGCTGGGGTATTGGTTTTGGT TTAGGATTTCGAGTAATCGCTGTAGACCCAAATTTCAGGAAGTTATCAGTTGATCATATTGTTTCAGCTTATAAGAGGAC CAAGCACAGAGCAATTCTATTGGATTATGATAGTACCATGATGCAACCTGGATCAATCAGCACAGCACCAAATTCTGAAG CTGTAAGCATCTTGAACAGCTTGTGCAGGGACACCAAGAATGTTGTTTACATAGTCAGTGCAAAGGAGAGAATGATTCTT ACTGAATGGTTTTCTTCTTGTGAAACTCTGGGAATTGGTGCAGAGCATGGTTTTTTTGTGAGGACAAATCGAGATGCAGA ATGGGAAACTTGTGTTTCTGTTCCAGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAAACAA CCGATGGCTCTAACATAGAGGCCAAAGAGAGTGCTCTCGTTTGGAATTACGAGTACGCTGACCGAGACTTCGGTTCATGC CAGGCTAAGGAGCTTTTAGATCATCTTGAAAGTGTTCTCTCTAATGAGCCTGTTTCTGTTAAAAGTAGTTCAAACGTTGT GGAAGTTAAACCTCAGGGTGTGAACAAGGGCATTGTAGCAGAACATCTTCTCTTAAGGATGCAACAAAAAGGAGTACTCC CGGATTTTGTTTTATGCGTTGGGGACGACAGATCTGATGAGGACATGTTTGAGGTTATAACAAGTGCAAAAGCCTCACTT TCTCCAGTCGCCGAAGTGTTCCCTTGTGCCGTTGGGCAGAAACCTAGTAAGGCCAAGTATTACTTGGAAGACCCAAGTGA GATTCTGAGAATGCTGCAAGGCCTGTCTAATGCTTCTGAAAAGTCTGCTAGAAGTTCTTCCCTGTCTTCTCCTTAA
Protein sequence (LotjaGi2g1v0273900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSRSYSNLLDLTSCGSPSFGRERKRFPRVATVAGVLCELDDDTNSAGSDAPSSISQERMIIVGNQLPLRAHRKDNGTWD FAWDEDSLLLQLKDGLGEDVEVIYIGCLREEIEPKEQDDVAQYLLDNFKCVPTFLPPDLFSKFYHGFCKQHLWPLFHYML PLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRMRLGFFLHSPFPSSEIYRTL PVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGIEYYGRTVSIKILPVGIHIAQLQSVMNLPETER KVAELHDQFKGRTVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGEVVLVQIANPARGRGKDVQEVQSETYATAKRIND KFGRSGYTPVILIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDEILGINTSTEKKSMLVVSEFI GCTPSLSGAIRVNPWNIDAVSEAMDTALMVPESEKKMRHEKHYRYVSTHDVAYWARSFLQDLERACKDHLRRRCWGIGFG LGFRVIAVDPNFRKLSVDHIVSAYKRTKHRAILLDYDSTMMQPGSISTAPNSEAVSILNSLCRDTKNVVYIVSAKERMIL TEWFSSCETLGIGAEHGFFVRTNRDAEWETCVSVPDFDWKQIAEPVMQLYMETTDGSNIEAKESALVWNYEYADRDFGSC QAKELLDHLESVLSNEPVSVKSSSNVVEVKPQGVNKGIVAEHLLLRMQQKGVLPDFVLCVGDDRSDEDMFEVITSAKASL SPVAEVFPCAVGQKPSKAKYYLEDPSEILRMLQGLSNASEKSARSSSLSSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 847 | 847 | 0.0 | – | |
| PANTHER | 1 | 847 | 847 | 0.0 | – | |
| Gene3D | 51 | 315 | 265 | 5.1E-78 | – | |
| SUPERFAMILY | 59 | 547 | 489 | 8.9E-153 | – | |
| Pfam | 59 | 543 | 485 | 2.1E-186 | ||
| CDD | 59 | 543 | 485 | 0.0 | – | |
| Gene3D | 316 | 528 | 213 | 4.6E-74 | – | |
| TIGRFAM | 588 | 835 | 248 | 2.3E-31 | ||
| Gene3D | 589 | 698 | 110 | 1.2E-6 | ||
| SUPERFAMILY | 590 | 835 | 246 | 2.81E-40 | ||
| CDD | 591 | 827 | 237 | 2.22336E-51 | – | |
| TIGRFAM | 592 | 793 | 202 | 4.3E-13 | ||
| Pfam | 593 | 826 | 234 | 2.0E-71 | ||
| Gene3D | 715 | 848 | 134 | 3.4E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi2g1v0273900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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