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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0275800 |
| Transcript ID | LotjaGi2g1v0275800.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 1.1; TAIR: AT1G68570.2 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1; TrEMBL-Plants: tr|A0A1J7GP92|A0A1J7GP92_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0275800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74773234..74778933) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATTATATCAAAATAATATATCAAATAAAGGGTGAAAGTAGGTCAGGCGGGCTGTCAAGGGCCCGCACCATGGCACG CTAAAGGTCAAGGCTTATGTTTTTTAAAAAGTCTGATCAACTAAAAATGTTGGACTCAGACTATAAAAAAAAAGTTTGTT TGACCTAAAAGGCTAGCTTGTTTACATAATATTATTTTTATTAATAATTTAAGTAAATAAAAATGATATGTTATGTAGAA AGACCTTCACTAACCAATTAGACCTCAGGCATATTAGTCCACTGGCTTACAATTTCCTAAAGAGAATGTTTTTCTGTTAA ATAAACTTGTAAATACGCTCGTATGCCCAACTAGACCTTAAATTTAGCCTATGACAAGCACAAGCCAAGCTTGAGGCGCA AAATAAGAATGAAGGTCAGGTTTGAGCCCCGCGTAAAGCCCGACCTTCTATTCCCACCCCCTATGTAAAATATGCACTCA TCACTAATTCACGACTATTTTCTAACTGATTAGCTAGTGTATTTACATTATCTATTTTACTAATTTATGCTAGAGTCCCA ATATATTTTCTTACTTCTCATACACATCACTTTTCATTTTTTATTTTCATTTTCCATTATATCATTTATCACAATTTTCG CTTGCTTTCTCCTCGGTTTTTATCCATCATTGCCCTATATTTTTTGTTGTATATGTGCAATGACCAATGAGAGATCATGT ACCAGAAATGCAAAAGAAAAGTAAAAGATATAAATGTATTCAGCTCCTATTTTTTGTGTATAAAATTTTAAAGTGGAGAA GGGAAGACACCCAAATACAAGACAAGGAAAATCTTTGGACTTAAACATATACATCTCACCCTAATAAAATATGTCTAATA ATGCAGTTCATCGAACATAACACTCAATGACACAACACATTGCAAGTTGAGGGAGAGAAAATTACACATGCCAAAACTTT TTGGTCCCATATGCATACCTGTCAAATAGTGTATCTAATAAAATGTTTTATTTGCAAATTACTATGTCCATCTTTTTTTG TCAACAAGAAGAGACGGAGACATGAGCATAGTATTTTTTTTTTTTTGTATAATCACGATATACTAACGTTACATTACACA TGTAGAAACTTTATCCAGGAATTGAAATAATTAGTGATCTGATTCAATAAATCAACGTTTATCAGAATTTGTTTCATTTA TTCTGATTTGCTAGGAGGAATTTGCATTATTCTCTCCATGATTTATTTTTTACATATTTATCTTGATTGATTCCTGTAAT TGAAGAATCTGCATTATTATTTTCCATTATCTTTCACAGAAAAGGAAATTTTTTATTTGTGGATATCATTCTAAGCGGCG GTGTGAAGACTTGACAGAAAAGTCAGATCTCACAAACCCTCAACCTTACCCTATAAATACTTAACTGTGTGGCCATTTTG ACGTACAAGAAAATTAGACAATGAATAGGAAATTCGAAAAGATGGAGCAAGATGGTAATCATGGTGGAAAGAAAAAGGGA GGGCTCATCACAATGCCCTTCATCTTTGGTAAGTTCATGAAGATGCATATAATAGTATTATACATCTCTCTATCTCTCTC TGAGTGTGTATGTGTGTGAGGTTTTGAACAAAGATAATCTTATATTATTTGTTGGATTCATTTTGGTGCAGCTAATGACA TTTGTGAGAAGTTGGCTGTGGTGGGTTTCACTACGAACATGATAAGCTACTTGACCACAGAGCTTCATATGCCATTAACC AAAGCTGCTAACACTATCACTAACTTTAGTGGAACTTCAAGCCTGACACCATTGCTTGGTGCCTTCATTGCTGATGCTTT TGCCGGAAAGTTTTGGACTATCACCATAGCTTCCATTTTGTACCAGATAGTAAACATTTTCTCCTTCTCATTCTTTTTTC TTCCCCTATAAGTTCTTCTCCTTCTAACAATGAAATAGTGTTTATTTTCTTTTGTTTTGTTACATATGAAAGTAAGGGTT TATTTGATTTGAAAAAACGTTTCATGATCTTATTTATATTTTTATCAAGAATCATGAAAATTATAGTTTCTATTTTTTAA TATTGATGGTAAAAATATATTCATTATCACTGTCATTTAATATACAAGAATATCTCAGATTAGGAAATTAACGTGAAAAT GAAATCATGTTTAATGATTATTGGTGAAAACGTACAATAAAAATAGAAAATATTTTTCAAAGCAGAAATTTCCTTAATCT CTTGAAGTGTATCATAATTTCCTTATTACAACTTGAAATTTAAAACAATTTATTTTAATCAATTAAATGCACTTTGCAAG CCTGTTGAAAGAAGTTGCTTTTTTTTACCAATTTGTGACCAAGCATATGCTGTTTGCGTTTGATTGCTCAGGGGTTGATT TGTTTGACATTAACAACCGTACTTCCACAAGCAAGACCACCTCCTTGCAAAGGTGAAGAGGTATGCCAGGAAGCTAGCGG GGGAATGCTGGCAGTGCTGTACATCTCACTCCTACTCGCGTCACTCGGGTCGGGTGGGATCCGACCCTGTGTGGTCGCAT TTGGAGCTGACCAGTTTGATCCAACAAAAACATGGTCTTATTTTAATTGGTACTACTTTGTGACAGGCGCGGCTACGCTT GTGGCCGTGACTGTTATTGTTTACATTCAAGATAACTTAGGATGGGGGTTAGGCCTCGGAATCCCTGCCATTGCAATGTT CCTCTCAATCGCTGCCTTCATTGTTGGATATCCACTTTATCGGAACTTGAACCCAGATGGGAGCCCATTTACCCGACTCA TTCAAGTAGCTGTGGCTGCATTTCGTAAGAGGAAGATACCAGATGTATCCGACTCAAAGTTGCTGTACCAAAATGATGAA CTCGATGCCTCTATTTCCTTGGGTGGGATGCTTGTCCATAGTGAACAGATGAAGTAAGTAAAATACTAAAATATCTCTTC TTTTTTCCATATTAAATTTGATGGGCAGATTGTTCTTAGAAGGTTCATTGGTCGTCCAACTCATTTAGGCCCACAAATTG GCTGTGGGATTTCATATTGTTCTAGTTCATAGTTTGTTCTATTTTGATGGGCATTATCCCAAGCCCATCCAATACAGATC CATGTTATCCACACCATTCCCTACCAGACCCTACCTCCATTTCTTCCACAAATTGGAACTCAGGATCTAACTCTTACACT TCTATTAAACACATACTAATACTATTTCAATAACTGCAGTTTACCCTTAACTAACTTTTTTTCATGAAAATTGGTCATAG ATTTTTGGACAAGGCAGCAATTGTGACAATAGAAGACAACTGCGAAATACCCAACAAATGGAGGCTAAATACAGTTCACA GAGTGGAGGAACTCAAGTCCATAATCAGAATGGGACCGATATGGGCTGCAGGCATCCTTCTCATCACAGCCTATTCCCAA CAAAGCACATTCTCCATTCAACAAGCCAAAACCATGGACCGGCATGTCACCAAGTCCTTCCAAATACCAGCAGGCTCCAT GACCGTTTTCACGTACCTCACCATGCTCACCGCCACTGTCTTCTACGACCGAGTCTTCGTTCGTGTTGCCCGCAGGTTCA CCGGGCTTGACCGGGGTATCAGCTTCCTCCACCGCATGGGAATTGGATTTGTGATCTCAATCTTTGCCACCTTTGTTGCT GGTTTCATTGAAATGAAGCGAAAGAATGTAGCTTTAGCCCATGGGCTTCTTGAACACTCCCATGAAACAATCCCAATCTC AGTGTTCTGGCTTGTGCCACAGTTCAGCCTTCATGGCTTAGCAGAGGCCTTCATGTCCATTGGGCACCTTGAGTTTTTTT ATGACCAGGCCCCAGAGAGCATGACCAGCACTGCAATGGCACTTTTTTGGGCTTCAATTTCTCTTGGAAACTATGGCAGC ACATTTTTGGTTTCCTTGGTCCACAAGTTCACTGCAGGGCCTAATGGCTCAAACTGGCTCCCTGATAATAACCTCAACAA GGGGAGGTTGGAGTACTTTTACTGGCTCATCACACTTCTGCAGATTATCAACCTTATTTACTACTTGATTTGCGCGAAAT TGTACACCTACAAGCAAACTCAGGTCCATGACAAAGGGGATAGCAGCTCTGAAGAGAAACTTATTGAACTTGCTACTGCA GACAGAGTTTAAATCCAATTTTATAAGGATTTAGTTTTTTAGATTATTAGTTCTCACCTTTTTCGAGGACCAAGTACGTA GAAGGTAGAGACCATGTCTTTATCTCTAAATAGTAGAAGGATTGTATCTATTAGCTTTTATCTTAGCTTAATGTTTCTAT GAATAATGATTGTCACTATGAAGATAATCGAAGTAATCAAGCTGAAGGGTCAAAGCTTTTTATTTTGGCCACCTTATATT AACAGAATCTTATGGAGATTGAAACTTCTTGTTGTCCTTCTGCATTTGATCTTACAGCCAATAACTCCTCAGGTTGAACT GCTAATTCACACTCTACTTTTCTCATCTTTTCTTTTAACTTAGCTTCTGAAAGTCTCTTGAACCTCGTACTTCTGTTTTT GTTTTCTCCCCAACTGCTACCAACATTACTCCCAGTTGATGCTTCACTACTCTTCTTCCCACTTTATTTGTACTTCTGGT CCACAGTCCACTGAATTTGACTTGGAGCTTCCATAATTCTTTCAAGAATTATTGAACTTCTCTCCATCGTTGGTCCCCAC TTTTCCCAACGCTGAATTTTTCTCCTCTACCAGTAACTCCTTCTTGAACAATGTAGAAGGCTCACAGTTTCTCCTCTTCC CTTGACCCATTCAAAAATACCTCCATCAAAAATTCTTCCTCCAATCCTTTCTGGGCTCCTACGTATAATTGAAATGCCCC ACAAAATCTGCAACTGAGCCTGTCTGCTTCAATCTTAATTATTGGTCCCCCCATCCCCCACCCCTTTTCCCAACACTGAA AATCTGCTACTGAGCCCTATCTATCTCCCTTATCATGTTTCCAAAAATTCACAAAATACGAATTTAAAGAATTTTTGCGA GAAAACATAATTTTCATAAATCAATGTAACAGTTTTTAATTCTAAAACAATTATCATAACGCAATGTAAAAGTGTTTTTT ATGAAAAAAACCAATTCTTCACAAAAGCATTGTAAGAGTGTTTTTATGCAAAAATAAATTTTCATAAACTAATTTAACTG AAGTATTTTCCACAATCTGAAGCATTTACTTTGTTAACAGTTCTCAAGCAACAAAATCAACCAAGCTACATTTTCAAGGC CAAGAATTTGTAGTTTTGTACAATTTGCAAAATTAGGGATTCACAATTTCTGTTCTTGGAACAAAACCCCAATTCCAAAA GCTACAACTAGATAACTTCTACAAGCCTAAAGCAGCATCATATAAGGTTAAAAGAAGAAAGTGCACCTTGAATAAATGCA AGAGCGCGAATCTTCCAATCTCGTTACAACCCCACGTAACAGAGAGCAACCGATTCAGATAACAACTGCAAAATGGGGAA TGCAAAACACGTTCTTCAGAAAAGAGGGAGGAGACAAGAATCAGAGTGAGAGAGTTGAACGCGCGTATTTTTAGATGGTC CCTTATGTGTGCCTCTCCCCAGTTGCTGGTATGGTGTCTCCGCTTAGTTGGATCAGTAGAATAGATCCACATATTGAATG AGGTAGCTTTTCTATTTTGG
CDS sequence (LotjaGi2g1v0275800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATTGGTCATAGATTTTTGGACAAGGCAGCAATTGTGACAATAGAAGACAACTGCGAAATACCCAACAAATGGAG GCTAAATACAGTTCACAGAGTGGAGGAACTCAAGTCCATAATCAGAATGGGACCGATATGGGCTGCAGGCATCCTTCTCA TCACAGCCTATTCCCAACAAAGCACATTCTCCATTCAACAAGCCAAAACCATGGACCGGCATGTCACCAAGTCCTTCCAA ATACCAGCAGGCTCCATGACCGTTTTCACGTACCTCACCATGCTCACCGCCACTGTCTTCTACGACCGAGTCTTCGTTCG TGTTGCCCGCAGGTTCACCGGGCTTGACCGGGGTATCAGCTTCCTCCACCGCATGGGAATTGGATTTGTGATCTCAATCT TTGCCACCTTTGTTGCTGGTTTCATTGAAATGAAGCGAAAGAATGTAGCTTTAGCCCATGGGCTTCTTGAACACTCCCAT GAAACAATCCCAATCTCAGTGTTCTGGCTTGTGCCACAGTTCAGCCTTCATGGCTTAGCAGAGGCCTTCATGTCCATTGG GCACCTTGAGTTTTTTTATGACCAGGCCCCAGAGAGCATGACCAGCACTGCAATGGCACTTTTTTGGGCTTCAATTTCTC TTGGAAACTATGGCAGCACATTTTTGGTTTCCTTGGTCCACAAGTTCACTGCAGGGCCTAATGGCTCAAACTGGCTCCCT GATAATAACCTCAACAAGGGGAGGTTGGAGTACTTTTACTGGCTCATCACACTTCTGCAGATTATCAACCTTATTTACTA CTTGATTTGCGCGAAATTGTACACCTACAAGCAAACTCAGGTCCATGACAAAGGGGATAGCAGCTCTGAAGAGAAACTTA TTGAACTTGCTACTGCAGACAGAGTTTAA
Protein sequence (LotjaGi2g1v0275800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIGHRFLDKAAIVTIEDNCEIPNKWRLNTVHRVEELKSIIRMGPIWAAGILLITAYSQQSTFSIQQAKTMDRHVTKSFQ IPAGSMTVFTYLTMLTATVFYDRVFVRVARRFTGLDRGISFLHRMGIGFVISIFATFVAGFIEMKRKNVALAHGLLEHSH ETIPISVFWLVPQFSLHGLAEAFMSIGHLEFFYDQAPESMTSTAMALFWASISLGNYGSTFLVSLVHKFTAGPNGSNWLP DNNLNKGRLEYFYWLITLLQIINLIYYLICAKLYTYKQTQVHDKGDSSSEEKLIELATADRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | - | – | |
| Gene3D | 5 | 284 | 280 | 2.6E-96 | – | |
| Pfam | 5 | 238 | 234 | 1.4E-49 | ||
| PANTHER | 6 | 292 | 287 | 5.6E-150 | – | |
| PANTHER | 6 | 292 | 287 | 5.6E-150 | ||
| CDD | 36 | 272 | 237 | 8.63028E-139 | – | |
| Phobius | 40 | 59 | 20 | - | – | |
| SUPERFAMILY | 53 | 272 | 220 | 3.14E-10 | ||
| Phobius | 60 | 78 | 19 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 79 | 101 | 23 | - | – | |
| Phobius | 102 | 120 | 19 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 121 | 142 | 22 | - | – | |
| Phobius | 143 | 161 | 19 | - | – | |
| Phobius | 162 | 186 | 25 | - | – | |
| Phobius | 187 | 206 | 20 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 207 | 231 | 25 | - | – | |
| Phobius | 232 | 250 | 19 | - | – | |
| Phobius | 251 | 269 | 19 | - | – | |
| TMHMM | 251 | 270 | 20 | - | – | |
| Phobius | 270 | 302 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0275800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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