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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0278100 |
| Transcript ID | LotjaGi2g1v0278100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 1.1; TAIR: AT1G68570.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1; TrEMBL-Plants: tr|G7JZD5|G7JZD5_MEDTR Peptide/nitrate transporter; Found in the gene: LotjaGi2g1v0278100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74980897..74985125) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAACAATAATGATCATGCTAGAAGTAGAAGGAAACAGGGAGGGCTCGTCACAATGCCCTTCATCTTTGGTAAGAA TATTCATAACAGAAACTCTAGCTAGTGTATATCTATTATTTCATAATATATTTTATGTGTGTGATTTGATTAATAGGAGA ACCTTATATTATTATTTTGGTGCAGCTAATGAGATTTGTGAGAAGTTGGCTGTGGTGGGTTTCAGTACAAACATGATTAG CTACTTGACAACACAGCTTCATATGCCATTAACCAAAGCTGCTAACACTCTCACTAACTTTGGTGGAACTGCAAGCTTGA CACCATTGCTTGGTGCCTTCATTTCTGATTCTTATGCTGGAAAGTTTTGGACTATCACCATGGCTTCTGTTTTATATCAG ATAGTAATTATCTTCCCCTTATCCTTCATTTTTTTATTTTTCACAAGAAAGATTTTCTCTTAATGAGGAAATAAAAGTGA AAATAAAATATTATTTTTATGATTATTGGTGAAAACATACACAATAAAAATAGAAAAATATATATTTTCCAAGCAGAAAT TTAATTCGTTAATCTGTTCTAATCAAGATTTCTTCTTTTGAAGTGAATTATATATGTGCGTGTGCGTGTGTGTGTTACAA CATAGAGTTAGCGTGTCAATGAATTGCTAGCTTAGTTAATAAAAAATAATGTCCACACATAATCCTTGGAGCTGCTTTGT ACTGTAACCTGAGCTCCTCTTTTTGCTCTTGGGTGCTTCTCATTTTCAATAAATTAAGTTTTTGCTTTAAAAAAAAGAAC CTCACTAAATTGAGGGATTCCATAAATTTTACAGGAAAAAAAGTGAAAATCAATAGTTAAGGTAAAAAATGGAGACTTCT TAAGCATTATGCTTAATTGAGCGTTTTGTCCATGAGTAGTGTAAATGGAGAAGAATTTTGTGGGAGAGATCTAGTCTCTT AACGTGATTAATAAGCCTAAAGATGATTAATTAGTTTTATGTGTTGTTGGTTGTGTGATATTTTTATAATAATAATTAAA AAGATACAAGCAAGTGAAGATTAATTCAAGTCCTAATTATATGTAACATTCATTGAAGAACTTTTTATTAGAAAAACTGA TAAATCTTTGAAATTTTTCAACCATGCCAAAATGATTTTATTTGTATCAATTAAATGCCCTTTGGAAAGCTTGTTGAAAG AAGCTACTTTATATTCCATTTTGTCACCGTGCATATGCTGATTGTGTTTGATTGCTCAGGGGATGGTTAGTTTGACAATA TCAGCAGTACTGCCACAGTTAAGACCACCTCCTTGTAGAGGTGAAGAGGTATGCAAGCAAGCTACTGACGGACAGCTGGC AGTGCTGCACATCTCATTATTTCTTGGGGCGCTAGGGTCGGGTGGAATCCGACCCTGTGTGGTCGCGTTCGGAGCCGACC AGTTTGATGAGTCGGACCCGAAGCAGACCACAAAAACATGGTCTTATTTCAACTGGTACTATTTTGTAATGGGTGCAGCT ATACTTGTGGCTGTGACCGTTCTTGTGTACATTCAAGATAATGTTGGATGGGGATTGGGCCTTGGAATCCCTACGGTTGC GATGTTTCTCTCAATCATAGCTTTCATTGTTGGATACCCGCTTTACCGGAATGTGAACCCGGCTGGGAGCCCGTTTACCC GGCTCATGCAAGTAGCTGTGGCTGCATTTCATAAGAGGAATGTGCCCAATGTGCCAGACCCGAATTTGCTGTACCAAAAT GATGAAATGGATGCATCTATTTCATTGGGTGGGAAACTTGTTCATAGTGAACAGATGAAGTAAGTAATTTATCTCACTAT CACTCTCTTCTTTCCATTTAAAATTTGATGGGCAGATATTAATTGGTGTTTCAATAACTTGACAATTCAATAATGGCCTT AAGTCATCAATGATTGGTAGAGAGATTCACGAGACAACCACTAAAGCATCATCATATGTTGATTTCTTGTGGATAAAGAT CATCAGTTGCACATTCCTTCATACCTTCATTTTTAACTTGATCTAATCAATTTTATTGTCTATAAATTTGGGACTGTAAG GTGTAATTTAACATTTATGGAAAGCATTTGGTGTGTCATCATTTCTCTGTAGTTAAATAACCACACACTTTTAAATTTTG AAGTTAATAAATTTTACATATATAGATAGATATGATAAGAGAAAGATATCTGATTTGATGTATTACTTAATCTGACAATA TGTATGTACTGACTAATCCTCTTGAATTTACAAGATATACTCAACATCAACCAATTATTTGTGTAGTGTCGTAACTCCAG CCAATTTTCATTAGGATAATCCAAGTGGGTTCCTTATTGCGTCAAATCAAAGTACAAGTTTCCATTTTTTTTTCTCATCC AAAGTATCTCCTGAGCTGATAGCTCATAGTGTCAGACTAATTAATCACCCGCGCACTAAGTGATAAAGATTTGACTAGAG TAACAAGTGTCTGTTTATGTAAATTTAAAAAAAAAAAATCTTTTAGATGTTATTTTTTTTCATACATCTAAAAGATAAAT TATACCCTCCAATGATTGATTCTTGAATTTTTCCATCATCAACTCATATGTCTCCTATCTCTTACCATTAAGTTATCTTT CGGGAAGAAAAGTTATTTGTTTAGATCATGATAAAATAGTTTTATATATAAAACACATTGTTTAATAGAAAAATATCTTC TTTTTTTAAAATAAACACAAATGTGTTCTGAATGTGGAAGTAGCAGATTAGAGCCCAGTAGTTTGCCAGGTTTTTCTTTT GTGGACCATAGTCATCGACCTCTTGCCATTACTAAGTAAGTAAAAGTGAGTTTGATGATGATCACATCATTAACTGGTCC AGTGTCCACCCAGCCCTGGTCTTGTCCACATGCTTCCTCCTCATGGATTTATATGAAAAGTTTTTGGATTTGATGACCAC CACCATCAACATGCATGTTTGTGTTCATCCATGATTAGGCAACCATTCTGCTAGCCAACAAAAGCTTCCTGTTAACATGA CTCATATTAGTCCCCACCTCACCTATTAGGCTATTACCAAACAAAGCCTAGACACAGTGTGCACTTTCAGTTTTGGTCCA TGTGATGCTTTGTTTTTGTTTCCACTGCCCTTTGCATTCCTGGGCTTGGGTGAGTGTCCACATTTGATCTTTCGATCGGA CCACGGTCGGTCCGATTATTGAACTTTAAATCGGTGCCTCGATCGGTCCAATGACCTGACCCGGTTCTGAGAACATTGGA GTAAAGTGAAATGGAGGTTTTTTTTCACTCTTAACTAACTCCCTTTTTTTTCAACAGATTTCTGGACAAGGCAGCAATTG TGACAGCAGAAGACAACAGCAAAACACCCAACAAATGGAGACTAAACACAGTTCACAGAGTGGAGGAACTCAAGTCCATA ATCAGAATGGGACCTATATGGGCCTCAGGCATCCTTCTAATCACAGCCTATGCTCAACAAGGCACATTCTCCCTTCAACA AGCCAAAACCATGGACAGACACATCACCAAGTCCTTCCAAATCCCAGCAGGCTCCATGTCTGTTTTCACCATCATCACCA TGCTCACCACCACCGCCTTGTACGACCGAGTCTTGATCCGTGTAGCCCGCAGGTTCACCGGGCTCGACCGGGGTATCAGC TTCCTCCACCGCATGGGAATTGGGTTTGTGATCTCAACTATAGCCACCTTTGTTGCTGGATTTGTCGAAATGAAGCGAAA GAATGTAGCTTTAGCCCATGGGCTTATTGAACACTCCCATGAAACAATCCCAATCTCAGTGTTCTGGCTTGTGCCACAGT ACAGCCTTCATGGCTTAGCAGAGGCCTTCATGTCCATTGGGCACCTTGAGTTTTTCTATGATCAGGCACCAGAAAGCATG ACAAGCACTGCAATGGCCTTTTTTTGGACTTCAATTTCTCTTGGAAACTATATTAGCACATTTCTAGTTTCCTTGGTCCA CAAGTTTACTGCAGGGCCTGATGGCTCAAATTGGCTCCCTGATACAAACCTCAACAAGGGGAGGTTGGAGTACTTTTACT GGCTCATCACGCTTCTGCAGTTTATCAACCTTATTTACTACTTGTTTTGTGCGAAATTCTACACCTACAAGCAAATTCAG ATCCATGACAGAGGGGATAGCAGTTCAGAAGGGAACCACATTGAGCTCGCTACGTCGGAAACAGTTTAA
CDS sequence (LotjaGi2g1v0278100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACAATAATGATCATGCTAGAAGTAGAAGGAAACAGGGAGGGCTCGTCACAATGCCCTTCATCTTTGCTAATGA GATTTGTGAGAAGTTGGCTGTGGTGGGTTTCAGTACAAACATGATTAGCTACTTGACAACACAGCTTCATATGCCATTAA CCAAAGCTGCTAACACTCTCACTAACTTTGGTGGAACTGCAAGCTTGACACCATTGCTTGGTGCCTTCATTTCTGATTCT TATGCTGGAAAGTTTTGGACTATCACCATGGCTTCTGTTTTATATCAGATAGGGATGGTTAGTTTGACAATATCAGCAGT ACTGCCACAGTTAAGACCACCTCCTTGTAGAGGTGAAGAGGTATGCAAGCAAGCTACTGACGGACAGCTGGCAGTGCTGC ACATCTCATTATTTCTTGGGGCGCTAGGGTCGGGTGGAATCCGACCCTGTGTGGTCGCGTTCGGAGCCGACCAGTTTGAT GAGTCGGACCCGAAGCAGACCACAAAAACATGGTCTTATTTCAACTGGTACTATTTTGTAATGGGTGCAGCTATACTTGT GGCTGTGACCGTTCTTGTGTACATTCAAGATAATGTTGGATGGGGATTGGGCCTTGGAATCCCTACGGTTGCGATGTTTC TCTCAATCATAGCTTTCATTGTTGGATACCCGCTTTACCGGAATGTGAACCCGGCTGGGAGCCCGTTTACCCGGCTCATG CAAGTAGCTGTGGCTGCATTTCATAAGAGGAATGTGCCCAATGTGCCAGACCCGAATTTGCTGTACCAAAATGATGAAAT GGATGCATCTATTTCATTGGGTGGGAAACTTGTTCATAGTGAACAGATGAAATTTCTGGACAAGGCAGCAATTGTGACAG CAGAAGACAACAGCAAAACACCCAACAAATGGAGACTAAACACAGTTCACAGAGTGGAGGAACTCAAGTCCATAATCAGA ATGGGACCTATATGGGCCTCAGGCATCCTTCTAATCACAGCCTATGCTCAACAAGGCACATTCTCCCTTCAACAAGCCAA AACCATGGACAGACACATCACCAAGTCCTTCCAAATCCCAGCAGGCTCCATGTCTGTTTTCACCATCATCACCATGCTCA CCACCACCGCCTTGTACGACCGAGTCTTGATCCGTGTAGCCCGCAGGTTCACCGGGCTCGACCGGGGTATCAGCTTCCTC CACCGCATGGGAATTGGGTTTGTGATCTCAACTATAGCCACCTTTGTTGCTGGATTTGTCGAAATGAAGCGAAAGAATGT AGCTTTAGCCCATGGGCTTATTGAACACTCCCATGAAACAATCCCAATCTCAGTGTTCTGGCTTGTGCCACAGTACAGCC TTCATGGCTTAGCAGAGGCCTTCATGTCCATTGGGCACCTTGAGTTTTTCTATGATCAGGCACCAGAAAGCATGACAAGC ACTGCAATGGCCTTTTTTTGGACTTCAATTTCTCTTGGAAACTATATTAGCACATTTCTAGTTTCCTTGGTCCACAAGTT TACTGCAGGGCCTGATGGCTCAAATTGGCTCCCTGATACAAACCTCAACAAGGGGAGGTTGGAGTACTTTTACTGGCTCA TCACGCTTCTGCAGTTTATCAACCTTATTTACTACTTGTTTTGTGCGAAATTCTACACCTACAAGCAAATTCAGATCCAT GACAGAGGGGATAGCAGTTCAGAAGGGAACCACATTGAGCTCGCTACGTCGGAAACAGTTTAA
Protein sequence (LotjaGi2g1v0278100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENNNDHARSRRKQGGLVTMPFIFANEICEKLAVVGFSTNMISYLTTQLHMPLTKAANTLTNFGGTASLTPLLGAFISDS YAGKFWTITMASVLYQIGMVSLTISAVLPQLRPPPCRGEEVCKQATDGQLAVLHISLFLGALGSGGIRPCVVAFGADQFD ESDPKQTTKTWSYFNWYYFVMGAAILVAVTVLVYIQDNVGWGLGLGIPTVAMFLSIIAFIVGYPLYRNVNPAGSPFTRLM QVAVAAFHKRNVPNVPDPNLLYQNDEMDASISLGGKLVHSEQMKFLDKAAIVTAEDNSKTPNKWRLNTVHRVEELKSIIR MGPIWASGILLITAYAQQGTFSLQQAKTMDRHITKSFQIPAGSMSVFTIITMLTTTALYDRVLIRVARRFTGLDRGISFL HRMGIGFVISTIATFVAGFVEMKRKNVALAHGLIEHSHETIPISVFWLVPQYSLHGLAEAFMSIGHLEFFYDQAPESMTS TAMAFFWTSISLGNYISTFLVSLVHKFTAGPDGSNWLPDTNLNKGRLEYFYWLITLLQFINLIYYLFCAKFYTYKQIQIH DRGDSSSEGNHIELATSETV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 84 | 84 | - | – | |
| Gene3D | 2 | 562 | 561 | 3.9E-195 | – | |
| PANTHER | 5 | 569 | 565 | 0.0 | – | |
| PANTHER | 5 | 569 | 565 | 0.0 | ||
| SUPERFAMILY | 17 | 550 | 534 | 3.4E-20 | ||
| CDD | 17 | 551 | 535 | 0.0 | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 85 | 109 | 25 | - | – | |
| Pfam | 85 | 510 | 426 | 1.9E-100 | ||
| Phobius | 110 | 129 | 20 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Phobius | 130 | 156 | 27 | - | – | |
| Phobius | 157 | 175 | 19 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| Phobius | 176 | 195 | 20 | - | – | |
| Phobius | 196 | 201 | 6 | - | – | |
| TMHMM | 199 | 221 | 23 | - | – | |
| Phobius | 202 | 226 | 25 | - | – | |
| Phobius | 227 | 317 | 91 | - | – | |
| Phobius | 318 | 336 | 19 | - | – | |
| Phobius | 337 | 356 | 20 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 357 | 379 | 23 | - | – | |
| Phobius | 380 | 398 | 19 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 399 | 420 | 22 | - | – | |
| Phobius | 421 | 483 | 63 | - | – | |
| TMHMM | 483 | 505 | 23 | - | – | |
| Phobius | 484 | 509 | 26 | - | – | |
| Phobius | 510 | 528 | 19 | - | – | |
| Phobius | 529 | 547 | 19 | - | – | |
| TMHMM | 529 | 548 | 20 | - | – | |
| Phobius | 548 | 580 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0278100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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