Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0282200 |
| Transcript ID | LotjaGi2g1v0282200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT1G26090.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q6DYE4|Y1609_ARATH Uncharacterized protein At1g26090, chloroplastic; TrEMBL-Plants: tr|A0A0B2P9G8|A0A0B2P9G8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0282200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75460796..75464126) extracted from Lotus japonicus Gifu genome v1.2.
ACTGCTTCTGCTTCATCTTTCTCGTTTCCGCTTCTCATAGGAACCTCACCTTCTCCTTCAACTGCTCCTCGAGCTCGAGC ACAACCGCCTATGGCAGTGGCATCTTCTTCGGAGCCGCCGACAAAGTTGCTCACTTTTCTCGGCAAAGGTGGCTCTGGAA AAACCACCGCCGCTATCTTCGCCGCTCAGGTACCCATTCCTGATTTTCTTTTAAAAATATTGTCTTTTTATTTTCAATGT TAAAAAAAAACTCTCATTTTCAATTACTTTCCTTTCCTTTCTGGCAAGGGGTGGTTAGTTAGTACCAAAAGCATGAGGGA AGATAATGATTTTCTCACATTTTCTACTTTCATTGTTCTCTACCAAGCAACCACCAGCTGAAACATTTCTTTTTTGTTGT TGTTAATCTTATTCCAAGTTCCAACCAAAATGTTTAATTTATGGATAAGACTTAGATCAATTTACATCAAATTATCAAAT CAAACAATGGTGTATGAAAGTGTTGTGGATCAATTGAGCATGCTAGAGCATGGGAAATGCAAATTTGGAGTATAAAGGAA GTCATGGTAAAAATAGTTTTGTATATTTAATGAGGAAAATGATCATGCTACAATATTTGCAACGCTGACAATACCCTTTT TGTTAAATGGGCACAAGGAAGAGTTCTTCCTGTGCCATTCATGAAGCTGGAATTTTAAATTTTAGCTTCTAAGAAGTAAA TGTCATTCTACACAAGGACTTTACAGTGACAGTTGACAGACCTGTGTAATTGGCTTTTAATCTTATGAAGATAACCCTTC TATACTGCATTTAGACCTAGGCATAGGTCATAGCATAGTCATTTATCATGTTGATCCTGGATGGTTTTTGTATGCCGTCA GATAGTCCCTAAATTCACGCAGTCAATGAACGGCTTAACTGTTGTGAAAAATATGAGCTGATGGACCTTGCTCTTATGGT CCAAATTTCGTGAATGTAGGAGATCAGTGACTGCAAGGAAACCAAATCCGCTATTGAAGCTACAGAACTTCATATTGTTT TTCGTTGATAAGAACTTCAGATTCTTTCTTTTGCCACAAATATTTATTAATAAAATTCTATTGAAGCTACAGAACTTCAT ATTGTTTTTCGTTGATAAGAACTTCAGATTCTTTCTTTTGCCACAAATATTTATTAATAAAATTCATAACCATCCACGTT GTACCTACAGTTTAATCTCTCAGTTTTTTTCCTGTGTACCTGTTATTTCAGCATTATGCATTGGCTGGATTGAACACATG TTTAGTGCTACATGGCCAAGACACCACTGCTGAGTATCTCCTCGACTGTAAGATTGGAACGTCCCATGTTGTATGCAGCA AGAACCTTTCAGCTGTTAGGTTGGAAACAACCAAAGTGCGTGTTGTTTATTCACTTTCCTCCCTCAGCGCCTCTATATAC ATCACCTTGTGCACTTTTGGTTTCAATGTGAACAGACTTTGAGTATTGCTCTATAAGTGCAGATGCTTCTTGAACCTCTA AAACTTCTCAAGCAAGCAGATGCCCAGCTTAATCTGACACAAGGCACACTTGGAGGGGTGGGTACGTAATATGTTTTTTA TAGCATAATTTATCTGTATTATGATGGACATATATTCCCTTGATCAAGTTTTTGTAACGGGACTCAGTCCTCCCCTTGTC TGTCATGAGCAGATTGTTGGAGAAGAGCTTGGCATCCTGCCTGGGATGGACTCAATCTTTTCGGTACTTGCACTTGAGAA GCAAGTGGGATTTTTGGGGACTGCAGCTTCAAAGAGACAACAAGACAAATTTGACCTAATAGTATATGATGGTATCAGCA GTGAGGAAACCTTGCGGTTCATAGGTGGAAGCAGTAAAGCAAGGTTTTAAATTTGTCACTCTATCACACACGTGTCTCAG ATTTGGTATTGGGTATTCTTTTTAGCAACGATTACGATGTGGCCAATCATGAACGATTGTTTATGTTATGATACTTTGTA AATGGATAAACTGAAATTTGCTTACCCTCAACGTCTTTGGTTTGCTCATCCTGATTTTGTAGATTGTACTTGAAATATCT CCGCACATTGGCTGAGAAAACTGAGCTAGGGAGATTGGCTGCTCCTTCACTCCTGAGACTAGTGGATGAGGCCGTGAAAA TAAGTAGCAGCCGATCATATTTCAATGGGAGAGGGAGTTCAGAAACATGGGACAATTTGGATCAACTTCTAGAGGTAAGA GTAAACACTCTTTAACATAAACATGTGTTAGCACAAAACCGTGAAGTTTTCTTATCGATATGTGTTGCCAGCGAGGATCT TCTGCATTCTCAAACCCACAGAGATTTGGTTGCTTCCTTGTTATGGATCCAAATAATCCAACCTCTGTTAACTCTGCATT AAGATATTGGGGGTGTGCAATTCAAGCTGGTGCTCAAGTTTCTGGTGCTTTTGGGGTTCGGCAAAAAAATATAGAATCAT TGGATAGAGTAAAGAAGGATTTTTCACCCTTGCCTTCTGCTTCCATTTCAAGTTTGTCAATGAGTAGCCCTATAGATTGG AGCAGAGTTCTAGTGGACACCATCAATGAAGATGCTAGGCATCTTCTGACTTCACTATCAAATCAAACCAGTAGTATGAC ATCGTCAGTTAAATTTGATATTAAAAGAAAATCAGTGACACTCTTCATGCCAGGTTTCGACAAATCAGAGATCAAACTAT ACCAAGTATGTAATCTTCTTCTGCTCATATATTTAATAAATTCTTCATGAACCATGATTTTGATGGCCCTCCTTTTAAAA GAATTCAAGAGAGATGAGATATATACTATCTCTTGGGCATAAATAATCAAACAAGTAAGGTTTCAAGTCATCATTATGCA AACACTCTTATATTATTTTTTTCCAACTTGGACCTTGCAGCTGATGAAAAGAAAGAGTATCTTGCTTCTCTTAAAGTTTT GGTTAACTTCCAAATTCAACTGTGTACATTTCAATAAAAATAAAATAGTTTGATTTATACAAAATTTACTTCTTAGAGGA TTGCTTGAATTCTATGGTTGAAGTGGACGTTAGTTTTTGACTCTTGTCATACAGGGTTATGCTGTGCTTCTCTTTCTTTA TAACACTGGTTTGATGTGCAGAACTTCTGAGAAAAAACAAGGTGTTGATTGATTTTATTTCTGTCTTAAATAAATACAGT ATAGGGGAGGATCTGAGCTGTTGGTAGAAGCAGGAGACCAAAGACGTGTCATTGCTTTGCCTCCAGGAATTCAAGGAAAG GTTGGCGGAGCCAAATTCGGGGACAGAAGTCTTGTTGTTACATTGCTGTAA
CDS sequence (LotjaGi2g1v0282200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGTGGCATCTTCTTCGGAGCCGCCGACAAAGTTGCTCACTTTTCTCGGCAAAGGTGGCTCTGGAAAAACCACCGC CGCTATCTTCGCCGCTCAGCATTATGCATTGGCTGGATTGAACACATGTTTAGTGCTACATGGCCAAGACACCACTGCTG AGTATCTCCTCGACTGTAAGATTGGAACGTCCCATGTTGTATGCAGCAAGAACCTTTCAGCTGTTAGGTTGGAAACAACC AAAATGCTTCTTGAACCTCTAAAACTTCTCAAGCAAGCAGATGCCCAGCTTAATCTGACACAAGGCACACTTGGAGGGAT TGTTGGAGAAGAGCTTGGCATCCTGCCTGGGATGGACTCAATCTTTTCGGTACTTGCACTTGAGAAGCAAGTGGGATTTT TGGGGACTGCAGCTTCAAAGAGACAACAAGACAAATTTGACCTAATAGTATATGATGGTATCAGCAGTGAGGAAACCTTG CGGTTCATAGGTGGAAGCAGTAAAGCAAGATTGTACTTGAAATATCTCCGCACATTGGCTGAGAAAACTGAGCTAGGGAG ATTGGCTGCTCCTTCACTCCTGAGACTAGTGGATGAGGCCGTGAAAATAAGTAGCAGCCGATCATATTTCAATGGGAGAG GGAGTTCAGAAACATGGGACAATTTGGATCAACTTCTAGAGCGAGGATCTTCTGCATTCTCAAACCCACAGAGATTTGGT TGCTTCCTTGTTATGGATCCAAATAATCCAACCTCTGTTAACTCTGCATTAAGATATTGGGGGTGTGCAATTCAAGCTGG TGCTCAAGTTTCTGGTGCTTTTGGGGTTCGGCAAAAAAATATAGAATCATTGGATAGAGTAAAGAAGGATTTTTCACCCT TGCCTTCTGCTTCCATTTCAAGTTTGTCAATGAGTAGCCCTATAGATTGGAGCAGAGTTCTAGTGGACACCATCAATGAA GATGCTAGGCATCTTCTGACTTCACTATCAAATCAAACCAGTAGTATGACATCGTCAGTTAAATTTGATATTAAAAGAAA ATCAGTGACACTCTTCATGCCAGGTTTCGACAAATCAGAGATCAAACTATACCAATATAGGGGAGGATCTGAGCTGTTGG TAGAAGCAGGAGACCAAAGACGTGTCATTGCTTTGCCTCCAGGAATTCAAGGAAAGGTTGGCGGAGCCAAATTCGGGGAC AGAAGTCTTGTTGTTACATTGCTGTAA
Protein sequence (LotjaGi2g1v0282200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVASSSEPPTKLLTFLGKGGSGKTTAAIFAAQHYALAGLNTCLVLHGQDTTAEYLLDCKIGTSHVVCSKNLSAVRLETT KMLLEPLKLLKQADAQLNLTQGTLGGIVGEELGILPGMDSIFSVLALEKQVGFLGTAASKRQQDKFDLIVYDGISSEETL RFIGGSSKARLYLKYLRTLAEKTELGRLAAPSLLRLVDEAVKISSSRSYFNGRGSSETWDNLDQLLERGSSAFSNPQRFG CFLVMDPNNPTSVNSALRYWGCAIQAGAQVSGAFGVRQKNIESLDRVKKDFSPLPSASISSLSMSSPIDWSRVLVDTINE DARHLLTSLSNQTSSMTSSVKFDIKRKSVTLFMPGFDKSEIKLYQYRGGSELLVEAGDQRRVIALPPGIQGKVGGAKFGD RSLVVTLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 407 | 404 | 6.7E-205 | – | |
| PANTHER | 4 | 407 | 404 | 6.7E-205 | – | |
| SUPERFAMILY | 10 | 272 | 263 | 7.83E-10 | ||
| Pfam | 11 | 192 | 182 | 6.7E-13 | ||
| CDD | 12 | 295 | 284 | 9.52555E-35 | – | |
| Gene3D | 337 | 408 | 72 | 3.2E-18 | ||
| Pfam | 348 | 407 | 60 | 8.7E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0282200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…