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LotjaGi2g1v0284700.2

Overview

Field Value
Gene ID LotjaGi2g1v0284700
Transcript ID LotjaGi2g1v0284700.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G38560.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FFW5|PERK8_ARATH Proline-rich receptor-like protein kinase PERK8; TrEMBL-Plants: tr|V7C7Q3|V7C7Q3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0284700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:75790078..75794366) extracted from Lotus japonicus Gifu genome v1.2.

TCCTAGAATTAGTCCTCCACCTGTCACACCAAGTTCTCAACCGGTTCCACCTTCAAATTCTACACCAAGATCACCTCCAA TTGTTCAATTGGCGCCTCCTCCATCGCGCTTCCTGCTTTCACCACCGCCGCCATCGCAGAACCGGTCAGAAAACTCAAGC CCTGAGGATGGAGACAGTGGTGGAATTGGTACTGGTGCTGTAGTGGCTCTTGTTGTGCTGGGTGGAATTTTGGGGTTTAT CTTGATTGGAGTTGCTATATGGTGCTTCAGGAGGCAAAAGAAGAAGGAGCCTGATAATAATGGTTATGTCATGCCATTCA CTCAACCTTCCTCAACTGGATCAGGTAAAATGGTTAACACTTAACGCTGACATTGTTGTTGTTTCTTTCATGGATTGTCC TTAATGTATCACTCTCCTTCCCTTGTTTGGTCCTCTTTTATTTGGTAGTTTTGTTCTCATTATAATTGGTGCACTGGTAG AGGTTCATTTTTCATTAAGTGTGTTTAGGTTACTTTTTGATTGGTAGTCAAAGGGGGTCCTTATTTTTGTTGAAGCAGAT TTCATGACTTGCTTAATTTCTCATTCCCATGCTTCCAGACTACATAAAAAAAAGTTAAATCTTTGCCAATTTCTTGCCAT TAAATCAATTAACCTTTGTTTGTAACTTTGTCCAGATTCATCCTTTTTCAAGACACCATCCTCAGCTCCTATAAGAAGTG GATCTGGCAGTGATGTTTTGCATTCACCATCTGACCCTGGTGGACTTGGCAACTCAAGATCATGGTTTTCATATGAAGAA CTGGTCAAGGCCACAAATGGTTTCTCAGCTCAAAATCTTTTGGGCGAGGGCGGATTTGGTTCTGTATATAAAGGATCCCT ACCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAAATTGGTGGAGGTCAGGGAGAGAAAGAATTCAAAGCTGAGGTTG AAATTATTAGTCGCATACATCATCGCCATTTGGTTTCTCTGGTGGGATTCTGCATTCAAGATACCAGAAAACTACTTGTC TATGACTATGTCTCTAACGATACCCTTTATTTTCATCTACATGGTAAAACTACTTCTGAGTGGCAAAAGATTGTTTCACT TCTGGTATTTTTATTACCTTTGATTGTAGTAACTGAAATTGTAATTTGCAGGGCCGGGTCAGCCTGTGCTAGACTGGGAA AAACGTGTTAGAATCGCCGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGTAATTATCAACCCTTATTACT TTTTTTTGTTTTGTTTGCAGAACCCTTATTACTTTATTCTTTGGTCATGCAAGAACATAAATGCCTATCAGTTAACTTTA TTCTTTGGAAATTTGAATTTTTTGAATTAGCTAAAAACCAAATCAGAAGGCATGAATGTGAATTGATGATGGGTGCTAGA AAAACATTATAGTCCTTTCTTTTTACTTATTTGGAACTCAATTGCTTGACTTAGATTTTGAGTAGTGTAGACTGTAGATA TGGTTAGTGGCTAGGAGTTTGGACTTTATGCTTATATTTTTCCTCGCAAATGTTAGTTGTTAGTAATGTTAGTAAATTAG TCCCTCCTCAGGGTTCAAACCCTTCACCGTTCATCCCACCCAACCCTTATGTCCCCTAGTTCTTACCACTTGAGCTTACC CTCTTGATTAGATGATCCTAGAAATCATTTGATATTTATAATCGAAGGTATGTTTACCTCACATGCATGACTAAACAAAG GAAAGTCTCATAATTTTAATGCATATGTCAATTGAACTATATGGAGAACGTTGACCTGATTGGGCTAAACATCTAGTTAG CGTTTATGGACAAAAGAGGGGTGAAAACCACATAATTGGATGTCGAGTTTTCAGTTACAAACACCAAAAATCTAATCTAT CATGAACTAGAGAAAAAATAGAGAGGTTGTGTTAGGTTATCCACAACCAATATATATGGACCAATGTTGCAACACAATGG CATCAAGTGATGCAGGTAGCTTATTCTACCTAAAGCCTGTTTGGATGCGACCGAAGAGCTCTTATTAGAGCTAATCTAGT GTATTTTTTAGTAGAAAAATTCTAATAAGTGTTCTTTGGTCCGTATCCAAACTGACTCCTAGTTGGATAGTGCCAAGTGG TTAGTATTGTTATTGATGTTGAATGTTACAAACTTTTCAGGCAATCCTCGGATTATTCACAGAGATATCAAGTCATCAAA CATTCTTTTGGATAACAACTATGAAGCCAAAGTATCTACCATTCTACAAATTCAAAGTTCAATATTGTTTGTGCTATATA TATATATATATATATATATCCAAATCTTAGTGCTCATATTTTTTATGTTACAGGTCTCAGATTTCGGGCTAGCCAAATTA GCTCTTGATGCATATACACATATAACGACGCGTGTCATGGGAACTTTTGGGTGGGTATTCATTAATATTTCTACTAACTT CTCTTGTCGTTTTTTTTACTATTTCACTTAGACTAACAAACTTTTAGAACACAATCTGCTTGAACATTGATTGCCTTTTT CTCCCTTAAAAGGTATGTTGCACCTGAATATGCTTCAAGTGGAAAATTGACTGAGAAGTCTGATGTATATGCTTATGGAG TTGTGCTTTTGGAGCTAATTTCCGGACGTAAGGCAGTAGATTCATCCCAACCCTTGGGAGATGAGAGTCTAGTTGAATGG GTATGTGTTTCACTCGTTTGCTGCAGCGGCTATCTTCTTGCTTATCTTGTTTCTGAGAAGCTCTTAGTTTAAACTACTCA TTGGGATCAAAATTATTTCATGATTATGCTTTTCTTTTCTTTGGGAATTACATATTTCTCATGGTAACTCGTGTGTGAAA ACGATGACAAAATGCTTACTATTTTTTGAGCCTTCCACTGTGACCATAGTTGCCATCCAGCTTGCAAAGTGCATCCATGT TTGTTGCATCTACTGTTGAATGTGAAATCTGCAGTGTCTTCACTCTTCAACACATAAATCTTAGTAAAAACAAGTTTTTG CATCAGATTAGTTACAGACTAGGGTCTAATTATTTAGGTATTGTATGTAAGCCCTTTTTTGAGAATTGAATCACTGACCT GTGAAGGTTAAGAAACTCTAAAAGGACCAGAGGAAGTAAACCCAGGTTCTATATTATTATCTTGTGTGTTTCAATGTCCA TGTTATAGAGCCCCTAATTTAAGGATATGAGGCATAAGTTAGTCCTTGATTTTCAATCTCCAATATTCTGCCATTTTTAT GATAAATAATGAATTTATTTTTACAGACATGTGGAGTGTTATCATGTTCTTATTATCTGTGTTCTATGCCTTCACTTACT TGACTGTTCTCAGCTCATCACCCTTTGGTCACTAACGATGCTACCTTTTTTCTCAGGCTCGACCTTTGCTGAGTCACGCA ATCGAAAGTGAAGAGTTTCAGAGTTTGGTAGATTCAAGGCTAGGAAATAACTACGTTGAAAGTGAAATGTTTTGCATGAT TGAAGTTGCTGCTGCGTGTGTGCGGCATTCGGCTTCAAAGAGACCTCGCATGGGACAGGTAAACAAATGAAAAAAGCAGC AACAGAGTTCTCTTGGATTATCAAGTAGTAAACATGCACACTATACTAACATTGTTTTTCTTGAAAAACAATTATGTTTC ATAGGTTGTTAGAGCTTTTGATAGTTTAGCAACTTCAGATATAACGAACGGAATGCGACTCGGGGAAAGCCAGGCGTTTG ACTCTGCACAGCAATCTGAAGAAATAAGACTGTTTAGGAGGATGGCATTTGGCAGCCAAAATTACAGCACAGACTTCTTC AGTCAGGCTAGTTTGAATACGTCGTGAAGGGCCACTGTACTTAATATGTTTGGATTAGCTTATTTTTTCTCAGAATCAAT GCTGACATCCAAAAACTACTTGTAGAAGCTTCTCCCCATAATTGATTTTGACTTAAGAATCGTAGAAGGATTTCCAAACG TGGAAGATTTAATTTGAACCAAAAGATCCTAGTCAAGCAAAGCCAAGGGAAGCCCTGCTTGAATTTGTTGGTTGCAGATG TGGCTAAGGCGCATTGCTGACTTTGGTTCTGGTATTTTACAGCATCAGGTTCAAACCCTCACATTCTTGTGACCAAGTTT CTTGATTCTTTTCATTAGCTGTTCATTGGCAGCAATTTTGCTTTTGTAATTAGAATTTGTAAAAAGTTACTTCTTATAGA TAATAAAATTTAACATGTTAATTGATTTGGTAGATAATGGTAAATAAAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0284700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCATTCACTCAACCTTCCTCAACTGGATCAGATTCATCCTTTTTCAAGACACCATCCTCAGCTCCTATAAGAAGTGG ATCTGGCAGTGATGTTTTGCATTCACCATCTGACCCTGGTGGACTTGGCAACTCAAGATCATGGTTTTCATATGAAGAAC TGGTCAAGGCCACAAATGGTTTCTCAGCTCAAAATCTTTTGGGCGAGGGCGGATTTGGTTCTGTATATAAAGGATCCCTA CCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAAATTGGTGGAGGTCAGGGAGAGAAAGAATTCAAAGCTGAGGTTGA AATTATTAGTCGCATACATCATCGCCATTTGGTTTCTCTGGTGGGATTCTGCATTCAAGATACCAGAAAACTACTTGTCT ATGACTATGTCTCTAACGATACCCTTTATTTTCATCTACATGGGCCGGGTCAGCCTGTGCTAGACTGGGAAAAACGTGTT AGAATCGCCGCTGGTGCAGCTCGAGGAATAGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACAGAGATATCAA GTCATCAAACATTCTTTTGGATAACAACTATGAAGCCAAAGTCTCAGATTTCGGGCTAGCCAAATTAGCTCTTGATGCAT ATACACATATAACGACGCGTGTCATGGGAACTTTTGGGTGGGTATTCATTAATATTTCTACTAACTTCTCTTGTCGTTTT TTTTACTATTTCACTTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0284700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPFTQPSSTGSDSSFFKTPSSAPIRSGSGSDVLHSPSDPGGLGNSRSWFSYEELVKATNGFSAQNLLGEGGFGSVYKGSL PDGREIAVKQLKIGGGQGEKEFKAEVEIISRIHHRHLVSLVGFCIQDTRKLLVYDYVSNDTLYFHLHGPGQPVLDWEKRV RIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDNNYEAKVSDFGLAKLALDAYTHITTRVMGTFGWVFINISTNFSCRF FYYFT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 33 33 - –
MobiDBLite
mobidb-lite
1 39 39 - –
PANTHER
PTHR27001:SF840
33 228 196 8.6E-127 –
PANTHER
PTHR27001
33 228 196 8.6E-127 –
Gene3D
G3DSA:3.30.200.20
40 136 97 7.2E-38 –
SUPERFAMILY
SSF56112
42 228 187 5.13E-60
IPR011009
ProSiteProfiles
PS50011
61 245 185 28.64
IPR000719
SMART
SM00220
61 241 181 1.1E-9
IPR000719
Pfam
PF00069
63 227 165 2.1E-31
IPR000719
ProSitePatterns
PS00107
67 89 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
137 235 99 3.2E-28 –
ProSitePatterns
PS00108
181 193 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0284700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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