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LotjaGi2g1v0285000.1

Overview

Field Value
Gene ID LotjaGi2g1v0285000
Transcript ID LotjaGi2g1v0285000.1
Lotus japonicus genome version Gifu v1.2
Description HD domain-containing protein 2; TAIR: AT1G26160.1 Metal-dependent phosphohydrolase; Swiss-Prot: sp|P87242|YC0H_SCHPO HD domain-containing protein C4G3.17; TrEMBL-Plants: tr|I3SNE6|I3SNE6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0285000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:75800569..75806609) extracted from Lotus japonicus Gifu genome v1.2.

AAAACATATTATTTTCCAAATCAAACAAGTCTCCAATATTTCCTTCCAATTACTGAAGAACCAGACCATAAAATAAGGGG GTTCAATCCACAACAACGACGGACCAAACGAACACTGTCTCTGTTCTGTTTCTTCTTCTTCTTTCTCTCTGAAAATGGCA GCGATTCATTCACATATTGCTCGCTTGTGGGTCCCACCTCTCCATCGCTCTTCCTCTTCTCCCTCCAATCATCCCAAACT CCTCCTCTTCCGCCACTCTCCCTCCCTCTCCCTCCGCGCCCATTCCTCCGCCGAACAACACTCTCACTCCTCTTCCTCTG TCATCGATTTTCTCACTCTCTGCAACCGACTCAAGGTAAAATTAAACACTCACTTTTTCAGATGATCCATCAATTCTGCG TTCTATTTCGTTTGTGTATTGGAACAATGTGCAGCATATACTTGATCCTAAAATCCCCAATTTGATTTTTTTTATTAAAA GCTTCATTAATTTCTATGACAAAAAACAAAGCAGAGATGAAGGAACCATGATTCTGTTGGTTTGTGAACATAATGTCATG AAATTTGTTGCATTTTCTGCAATTGGTAGCTTGTTAGTTTACCAATGTCTATATATCTGTCACGAATGTGCAAATTTGGG TTTGGAACCTGTGACATTCCTTTTCTTTGGTTAATTATTCATGCTGAAGAAAATGGTGCTACAATATTTAGTACAAAGTT GAGGATGTAGACTAGTGGTTTAACAACACTGATTGGATAGTAATGTGGTTTCTTGTTGCCATACATGTGTGACTTGTAGA CCACGAAGAGGAAAGGATGGGTCAATCATGGGATAAAAGGTGCTGAATCGATTGCTGACCATATGTACCGCATGGCTATA ATGGCACTGATTGCTGCCGATGTTCCTGGATTGAGTAGAGAAAGGTTTGACCTTGAATTTCTCATGTTGTGTTATTTGAA CAACTGTGGTGCTTATTTCTGTTTCGGGTCAGTCTCTTTGGTTGTTCTATTGTGATTTTGTGTGATGCATACTTGGATTC CATGATTAAGTGAAACTGTGAAAGTAGAGTACTTTGGTTGGAGTCTGTGTTCACACTGTTTGGGTTGCATGACCGGTTTG ACATAGGTTTTAAGGTTTTATTGGAGTGTATTGTGTTACGTAGTTGTGGCCTTTCCTTTTTATTCTATGTAATTTGGGCC ATTCAGTTTGGTTTACCATATTTGAATTTCCATAAAACCTCGATAGTAAATTAAATGTTTTTTGCACTTATCCAATGCAG GGAACAATGCCATAGCTATTAATCAAGTATAACTGATTGGTTTCAGAAACATTTTAATGTTATGAGCTTGCTTTAAGGTC ACGTGTTTCTCAGAAAGAACAACTTAAATTAGAAAACAACTCTTGCAGCTAGAGACATTGGCTTAAAGCAAGGGCCTAAT CATGCAACTGGTGGTCCATTCTCGAGCATAATTTCACTGATTTGCAATTATTTAACAAAATATTAAATATAAAAGTGTTC ACGTAAAAGCCCTAAGAACGAAGTCGGTCAAACTTAATGTATATTGCTTTGCCTTAAAACTCTTACATGAACATGTCAAT ACAAAGTATGAGGGCTCCTGTATATAGTTATGGCCTCCTGAATGGTGATTAATGAGGGAGAGAGGATCATGCGATTACAT TTATGCGGAGGAGGGGATCACGTAATTACAATTAGATGGGGGAGAGGGAACCAAGGAAACGTAGAATAAGACCAGAGGGA ATGAATCTGGACGTTTTCCTAAGTGGGTGGCTGACTAATATCTGCGTGTGCTTGGCGAGATGTTTGCAGCCTGGTCGGCC ATATAATCCTTAACGGTCCAAAAAGGTTGGCCCTTCTATTTGGCATTAAATTGTGGCTGGACAATGAATTGCCTGTTTCA TAGTTTTTGTTCAAGCTTGCCCCCCTAGGCTCTAATAATTTTTGTGAAGCTGCTAGGTACTTGTTATTCCAGATTAGGAA GATTTCCTTGCACGTGAGATTTGTAATGTTTTTACTCAGTTTAGGTGGTATAAGAATATGTAAACTAAGCACTCTGATCA TTATGCTTTCCCTAGTGAGTGTTCTGTCTTATAGTGTTGGCCAGTATATTTATAACTCACATTGCTGATTTTGGTCACAA ATTTCCTTACCCCTACAGATCTATGTTTGTTTGTGTAATTAACTTTGTTTACTTACCCATAATTCCTGCTATTTATATTT ACTGAATTTGTTTTATGTAATCCCCTTGAGTTTCTCGCTAAACTTTTTTTTCCTGCTGCTCAGATGTATCAAAATAGCAC TTGTGCATGACATTGCAGAAGGTATCTGTCGATTTCTCTCTACTGAACTGTTTCTGCAGTTAATTGTGTTAAATCTTAGC GGGAAATTTTGCATTGGGTGATTTACTAGCTGTATGGGGGTTGAATTGAAAAAATGCAAATTATTTGAAATGTCTGGGTT GTGACTCTTGTTGTCGCAAGCTGCAATAATTGGTAGTCTCCTCGGGCCACTTTAGCTTGAATTTGTGACTCTTGTTGTCG CAAGCTGCAATAATTGTTCAAAGATGAGTATGTGTTCATCTCATGTCGTGCTTATCTATTCTTAGGCAGAAGATTTTCAT CATTCATGACTTAGTTAATTTTGTATAAATCTGTTCTCCGCCTTAATGATAATCAGTGGATTAATAACATATTGAATGTT GCTATACAAACATTATCACATTGCTTATCAAATGATTGAACAGGATGAAATGTCTAACTGGAATGCTTAGATGAACATTT GCAAAAGCTGATTGAGTTACATTATTTTTCAGTGGAAGGTAGAGTTTGTAATGTATACAATGAAGGCAAAATTTCATGAA AGAATGTTGGATCAATTGACTTTCATCCACGAATTGTAACTTAGTTACTGAACACATTGTTTTTCCTCAACTATATTTCT AAGAAAAAGATAAAAAGGAAATTGGCTAAGCATCAAGTCTTCTTCAATGTGTTGCTAGTTTATAATACATTGAAATCTGA GTCTGATATTGCATTCAATAGCTATTGTCGGAGATATAACCCCATCTGATGGTGTGCCCAAGGCTGAAAAGAGTAGAATG GAGCAGGAAGCTTTGAACAAAATGTGTGAAGTTCTTGGTGGAGGGATGAGAGGTATTGCAGATTTTTTCTTGGAAATTTG TTCAGAGCTTCCTAATTTGGCATTGAATAAGAATTTACGTGAGATTTTATGTTTTATTTGCAGCTGAAGAGATCAAAGAA CTATGGACAGAGTATGAAAATAATGCTTCTTTGGAGGCTAATCTTGTTAAAGATTTTGACAAGGTATGCATGTCCCTGAT ACAGATGGACCCATACTTGATTGCACTCATAATTAGTGTCATTAGTATATTAAACCAAAGAAAACTTATATCTTAGATAA TGCTGAAGTCTGAGAGTGGTGACATTGACAATTGGGCTTGATTTTGGATATGGTTACTATGAAAGACTCAAGTGGTTGGT TGCCAATCTGGGTCATGAACAATATTGGTGATTGATAATGATGTTGATTAGATGCTCTAGAAACTTGATGTTGGGAGATG TTTCTTTTATTGTAAATGAAAAATCTGGTATAAAAAAATTACTTTAGTGAGTACTAGAGAGGAATATGACCTAGCATCAG CCAACTTGGTAGGGCGCAATTACTATCTAGACAATGGAGACTGTTTTATTGATAAGAAAACTGAAATGAGATACAGATGA CAAGATCAGCATGCACCACAGCTATGGAGTTGGAGGAAATCCCCAAGACCAAAGCTCTAAGCTTAGAAAACAGATATTGT CTTATCCCCTCATGTAAAACACCCGTCCCTTTTCTCTGACTTTTAACTCCCTTACATTCCTCACCCCTTAATCAGCTTAG TCCTACAAGAATATGCTTGCAGGGCTTTTGGTCTGGCCGGGCTTAGCCACTGGAGGGACATTTGGTTCCACAATTCCATC CATCTTCTCTGTCTTCAAACTCCCTTACATTCAGCTGGCCTAGCTTAGCCACTTGTGGGACATTTGGCTCCACAAATCCA TCCACCTTCTCTGTCTTCTACCTTAAACTCCTCACCCGTTGATCAGCTTAGAGCCCATTCGGATACGGACTAAAGAAACT TATTGGAGCTTATCTACTAAAAAGAGCACTAGAAAGCTCCAATAAGTTCTCTTTGGTCTGCATCCAAACGGGCTCTTAGT CCTACAAGAATGTGCTTGCTGGGCTTTTGGTCTGGACTTGGCCACTTGGGGGACATTTGGGTCCACAATTCCATCTAATT GAGGGTGTAGGATGTCTGTAAACAGCCTCAAAGGGAACATTCGACTCTTTGCACAATTATGATTTTATCGGTTTAGAAAA GTGCAATATAATTAGGCCTCTTTTGGTAAACCTATGCAAGTGTTTGTGAGAGCTTATATAACTAGCTTATGACCTAACTA TAAGCTGCTAAGATTAGCTTATGAATAAATGTGTATCGTACCACTACATATAACTTATTTTGAGCTTATTTCAATAAGCA TATCTAATTCGCTTATGAATAACTACTTATTGCTATAAGTGCTTAATTAAGCTGTTTAAGACTTTAATCCTGCATATAAA GCCATATTAATTACTACCATCAAAGAGGTTTGCACCAAAATAACAAGTTATTTGAAGTTTTAGTTATTACTTATTATAGA ATATATCTTGGCTAAATATGAACAGAACAGGGTAATTAAATATTTCTATTGGACATCAAGAAGCAATAAATATGCATTTG TTATAATTTATGAAGTCTGTACCAGTATTCAATTTTATCAAAGCAGAATATATTTATAACTTTTTGTAGTAAATTGAAAT AGGCTAAAGTTCATGAAGATAAAGTGCGATTATTTGCCCTTTTATTGCATCATATCATGCATCTCTGGAGCTGTGATATC CTGATCTAGTGGTTGATTTCTAATTCCATTCTCTTGTCCTCTGAATTCTGATCAGGTTGAAATGATTCTACAAGCGCTGG AATATGAAATGGGTAAGTTATAGATAGATACATTTGCTTGTGGCCTGTGAATCAAGTTTGGATTTCTGTAAATAGTTCAA CTCAGTCCAGCATTTTGATTAGGGTTAAATTAAATATGTTTAATTCTTCTTCCTAAAATCAATGCAACTTTTACTGAATA TTCTTCATGATATACTTTGCAATGCTAATCTCTCAATTGATTTTGTTCCTTGTGGCAGAACATGGAAAAGTATTAGACGA ATTTTTCCTTTCAACTGCAGGTAGAATTGAATCTTTTCTTAATTATAAATGAAAATGCTCATCATATCTTTTGTTGAACC TTTGTCAACGTCCTCATTTTTTATTTGTCCTTCAGGGAAGTTTCAAACTGAAATAGGAAAAAGTTGGGCATCTGAGATTA TTTCTAGAAGAAAATCTTTATCAGCAAACAGGCTGAGTTGATATAGCAAAATTACTAACTGTATACCAATAAACTTGTTT AGATGCAAAGAGTTTGGTTTTGGAGAGTTTGACATAATTTGGGATGATAAATATTTGTTGTCCCTTTCATAGGAAATTTT CTTTTTTCATCTTTGGATTCAATTTTTGTCTTTGTTGGTGACGCCTTAAAACTTAGTTTTTCCTTCTTATTCTTTTTTTG TCAACATTGTGGTATAAATTACAATCAAATATTTAGGCAGGTATTTCACTACTGGTAATCTGTCCTCTACGAAAGAGTTA GAAGTTGTAATAATTTGATTTTGTTTTTTCTAGGAAGTCAATTCGAATTAGCAAAGCTTATTTTATTTTTGATCAAATCG TCTGGCACTGAAATTTCAATGAAATATTATTTAGAAATCTATGAACAAATAAAGACAAGATATTTTTAATGGAGTTGGTC AAGTCAAGGTATAGTACTCAAATAATTTATTTAATTGCACTCTAGTAGCTCTAGATTGGACTATGTGGTCCCTCTGAGCT AATTATGTTCATCCTTGTTTTTACTAGTATAATAAAGGTGC
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0285000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCGATTCATTCACATATTGCTCGCTTGTGGGTCCCACCTCTCCATCGCTCTTCCTCTTCTCCCTCCAATCATCC CAAACTCCTCCTCTTCCGCCACTCTCCCTCCCTCTCCCTCCGCGCCCATTCCTCCGCCGAACAACACTCTCACTCCTCTT CCTCTGTCATCGATTTTCTCACTCTCTGCAACCGACTCAAGACCACGAAGAGGAAAGGATGGGTCAATCATGGGATAAAA GGTGCTGAATCGATTGCTGACCATATGTACCGCATGGCTATAATGGCACTGATTGCTGCCGATGTTCCTGGATTGAGTAG AGAAAGATGTATCAAAATAGCACTTGTGCATGACATTGCAGAAGCTATTGTCGGAGATATAACCCCATCTGATGGTGTGC CCAAGGCTGAAAAGAGTAGAATGGAGCAGGAAGCTTTGAACAAAATGTGTGAAGTTCTTGGTGGAGGGATGAGAGCTGAA GAGATCAAAGAACTATGGACAGAGTATGAAAATAATGCTTCTTTGGAGGCTAATCTTGTTAAAGATTTTGACAAGGTTGA AATGATTCTACAAGCGCTGGAATATGAAATGGAACATGGAAAAGTATTAGACGAATTTTTCCTTTCAACTGCAGGGAAGT TTCAAACTGAAATAGGAAAAAGTTGGGCATCTGAGATTATTTCTAGAAGAAAATCTTTATCAGCAAACAGGCTGAGTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0285000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAIHSHIARLWVPPLHRSSSSPSNHPKLLLFRHSPSLSLRAHSSAEQHSHSSSSVIDFLTLCNRLKTTKRKGWVNHGIK GAESIADHMYRMAIMALIAADVPGLSRERCIKIALVHDIAEAIVGDITPSDGVPKAEKSRMEQEALNKMCEVLGGGMRAE EIKELWTEYENNASLEANLVKDFDKVEMILQALEYEMEHGKVLDEFFLSTAGKFQTEIGKSWASEIISRRKSLSANRLS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11845:SF17
35 237 203 2.2E-126 –
PANTHER
PTHR11845
35 237 203 2.2E-126
IPR039356
Gene3D
G3DSA:1.10.3210.10
41 237 197 6.6E-73 –
SUPERFAMILY
SSF109604
55 231 177 9.11E-42 –
Pfam
PF13023
63 219 157 1.4E-46
IPR006674
SMART
SM00471
81 198 118 3.0E-7
IPR003607
ProSiteProfiles
PS51831
85 189 105 14.358
IPR003607

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0002953
Molecular function 5'-deoxynucleotidase activity Catalysis of the reaction:a 2'-deoxyribonucleoside 5'-monophosphate + H20=a 2'-deoxyribonucleoside + phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0285000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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