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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0288000 |
| Transcript ID | LotjaGi2g1v0288000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WPP domain-interacting tail-anchored protein 2; TAIR: AT1G68910.1 WPP domain-interacting protein 2; Swiss-Prot: sp|A8MQR0|WIT2_ARATH WPP domain-interacting tail-anchored protein 2; TrEMBL-Plants: tr|K7K7Y5|K7K7Y5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0288000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76115084..76120776) extracted from Lotus japonicus Gifu genome v1.2.
TTTACACGAGTCTAAGCCATACAGATAGATCTGTGTCTTATCTACCTGTTTGTGCGTACCCAGTTGATTTGTGTTTTGTG TAGTGCTCGAATCAAACCCAATTATTCAAAGTCAATGTCATCACTTCAAGATCAACGTGCACCCCAATTCAAGTCTTGAA GTTTGAATTCTCTTTTAGATTTTTCATTCATAGATCATGCACTAGTCTGACCATTTTGCTGTTTGCACTTCTAGTTCTTC TTCCACGGTTCCACCTCATTGATCCACCTAGATTGGAGACACACTATCACAAAAAACACCCTTTCTGTTAATTTTTTCTT TGAACTTGGAGAATGGGAAAAAGGTGACCGACCCATTTATTTATAACGGTGACCCATTTATTTATAACGGTGACTTGGAA ATAATTGGTAGTTTAAAGGCTTGGCTAGAGGACCAGGGAAGACTAACCAGGACAATTTCCAAGTGGGGTTTCTGATATGT CAAGTTTTTCAAGATCATTTTCCTGCTGAGGAAAGAAGACCCAGAAGCGTTTTGCAAAAGGTAAGGCTTCCCAATTGATA ATTTGATGTAACTTTGAATTTTTTTTACACGGGCATCCTAGGTGGAAATGAGAAGGTCAAGCTTGTTGTTTATGATAGTA GTAGCATGTCCTAGTTTTGGAATGGTAAAGTTTGTGGCTTTGCTGTGGATTGTAACTTGGGTGGTAGTTTGTCTTGTAAA TTTAAAATTCTGATCAGATGTTAGCTGGATGTTTCAGTAAATTCGTGGTCACTTTTGTGTGATGTTATAATTAATGGTTT TTGGTGGCAATCGATGGTGTGTTGTGTGTGTTGAATTTGTTAGAAAACTCGCATGATCTGGTGTATAACATCAGTTAGAT TGGACTAGATGCTTCATTAGTGGAATTAGCATTATGTTAGAAAGTCAAAATTGTACATTTGAAATGAAGCAAGAGAATTA GCTTTTTTTAGTTATGCATGTTTAAAGACTGAAAGTATTGGGTTTTCCTTGTTAGGTTTTCCCAAGGGGGTTTTATCCTA GCAAGGTTTTAATGACGCTTGTTTTGTTAAGTCTATTTTCTTGGAAGTATTGGGTGGGGTAGTTCTGTCACTCTATGATC TTTGTTATGTTCATGTTAGTTCTTAGTCTATATCTTTTCTCTTCTGTATTGGGTTGAAGTACCCCTTGTACTTCTATTCA ATATAATTCTTATTGCCTATCAAAAAAAAAAAAAACTGAAGAAGATAGATAATGAATGTTAGTGGATTAGAAATAAGGAT TCTAAAAGAAGATATAAGGCATCCTAGTTCCTGAGATTTTTCAATTTTCTTCTTCTTAATATATCTCTCTCTAGTTGTTC AATATCTGGAAAAGGTTGTGGAAATTGATATAGAGTGGAAATGCTTCTTGTGTGATATTTGGAAATTCATATGAAAGGAA CAGTGGACAACAGCTACTTGTAAAGAAATAAACTAAGATTAATTGATCTTTAAAAAAAATAACTACCATTATGCTATCAA AAGAAAATCTTCCAATAGCTTGCATTTTGTACTTTCTTTTACTTACATCTCTTCAAAGCCTTACTCATTTTGTATACAGT AACAGTTGCAATTTTTCATCTTTCCTTTGTGGAATAGGCAAAACATTACATATGCTTTCTTATAACCAACTAATTGTCTG CTATTTATCTAAGTTAAATTTATCCTGTATTAATATATAAGTAAGGCTGTTTCTTTTCTTCCACTAAAATCTCATTTCTA CCTTATTTTCTGGACTTGACTTCTAATTGCCGAACCAAGAGGCCCTAGAGATACAGACTAGCAATGGATGAATTTGCTAA CAAAGTTCAAGGCGGCTTTAATGCTGGAGATACAGCTTTTGGGAAACTTCACTCACTCAAAGGGTTCTCAACTAAAGAAA ATGATATGCAAGAAATGGAGATGTCCCTGCAAGCTTTAACAGAAATAGACCACCGCTTAGCCTATTCTTCTGAGAAGCTG GTGAACTTGCATGCACTTTATATTTATCTGTTGGCCCGTGAAAATGATCTTGAACCAATGGATTCAAAGAATGACCTCAT CTTGGCAAATATGTTTGAGAAGGCAATGACATCAGATCTATTGTCTGGCATTTTAGATTCTGAGGTAAGAGAGCTGGACA ATTTCATCGACACTCTACAGGAAGAAATTGTTGATGCTCGTCATAAAATATTTTCATGCAGACATCTGACTGAGGTTTAC TTTATAATGGATGAAAAATTGCACGACTCGGAAGAGTCCGTGAAGCAGTTTCAACAGCAGTTATTGGAGTTGAAGATGCA ATCATCCCAGTTGCAGAAAACCCTTGTGGCTTTCCAACATGAGAGTTGTAAGTTTAAATTTTCATTTAGATATTTATTTT TTCAAATATTTATACTGAGGATGCAGTTATTTTCCAGGGGAAACGGGGAAGACCTTGAGTTTATCAGAAAATGGTCAGCT GATAGATGCTAAAGCAAAATCCAAGGATCAGATGGTTGAACAACGAAGATATATTCTGCGAATGCTTGAGAAGTCCTTAG CACGGGAGCTAGATCTTGAAAAGAAGCTAGCAGAGTCAAGAAAAAATGAAGAGCTAAAGTTGAAACTCCGCTACACGGAA CAAGTAGCATTTTATATGGAAGAAGCAGCGGAAGTAGTTTGGGGGAGATTTCTAGAGGCAGACAATGCTTCGGAGGTGTT GATGGGAATTTCTAAAGGTATAATGGGACGCCTCCAAGTTGCTGAATTCAACCTCAATGGCTCTATGCAACGCGAAAATG AGCTGAAATCAAAAGTTAAAAATTTCATAGAACAACTTAAGGGTAAAGATGCTGCTTTAGAGAAGCTTGAGAAATGTAAT GTTCAATATCTCAAGGAAAATTCTGAGGTGTTGGCTTTGAGGGAAAAGGTGAAATTTCTTGAAGAAGAACGAAAAGATTT TGAGCATCGGATAAATGCTTTGACAGAAGAAAATGAAGCATGTCATGAACAACTCATTGAGGCGGAAAGCTTTGTCGAGT CTCTAAAAGAAAGCATTGACATAGCAGAAAATCGGGCGGAGAATGCAGAAGCAAAGGTCACACAGTTAACTGAGACCAAC TTGGAACTTACTGAAGAGCTGAATTTCCTTAAAGGGAGTGCTAGCACTGCAGAGAAAAAGGTTGGTTCACTAGAGAAGCA ACTAAGAGAATTAGATATCCAGCTACAGAATGCAAAGGCATCTTCTGAAGCAAGTCAAGAACAGCAGAATATGTTATACA CAGCAATATGGGATATGGAAATTTTAATTGAAGAGCTAAAATCAAAGGTTTCAAATGCTGAAAGTAATAAAGATAGTGCA GAAGAGCAATGCATTGTGCTATCTGAGACTAACTTTGAACTAAATAAAGAATTGGATCTCCTGAGGTCCAGAATGAGTAG CCTGAAAACATCTTTCGATCAAGCTAGAAAATCAAAATTATCAAGTGCAAAAGAAATTGATACTGGAACTAAGTTCATCA TGGATATGATAGCACAGCTCGCCACTGAAAGGGGGCGCATCAATAAACAGGTTAGAACTTCTTTAGTTTTCTAGCTAAAT TTGAACTCTGGTTTTAATTTTTTTTAAGAAAAGGAAACCACTATATTTGTCATTTATAGATTTGTGTTTACTCGACGGGT ACCTGAAGTTTAAGTTAGTCAAAGGTAAAGTCCAGTGTTTCAAGTTATCTCAGTTTGGTCTGTCTGTGCTTATTTAATGC AATTTTGCTCACCTGAACTCTGTATACTAAGACCACATTTAATTGGACTAGAACATTCAAGGACTCAAATTGTAGAAATT ATGCCTTGAAGGACCGAACTGAGAAAATTTTATATTCTGAGGAACAAAGTAATAGTTTCTACTTTTATGTAACAGTATCC GTGTTGCGTTTGATATTCGTGCTGTGTTTGTGGTTCTCAGATGGATAATTTGCTAAAAGAAACTATATTGGACTTATGAC TGCCATTGGTTCCAGTCACTATGTTTTGTATAATTAAATTAGAACTTGAATTTGTAAATTTTCTTGGCAGTAGGATGCTC AAAGTGTGATAACTTTTGAGTTATCAACAAATCATTGGTTCTTTTCTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCC AATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCCCGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTA ATATGGTATCAGAGCCTATCCTAGATTCATTTGTTGTGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACG TTCCAGTCTGTTCAATCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTGTTT ATAAGGGTTGTGCAAACCTCAACTCCCGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATTTTCCCAA AAAATTTAGGGGTATATTATTTAACCGAGTCGGAGCTGATACCACTAACAGGACGTTAACATTCTTACCACTATGTTCTT CCTGCAGCTAGAGGCTTTAAAACAGGAAAATAAAAGTTTGGTAAAAAAGTTAACTGGGACCAAAATTGGTGTCCCTCTAG ATGCATGCACCAATGAACTAAATAGCAGAAATGAAGATCAAGCTTCCAACATTGACTCAAGCAATGATAGCTGTACAAAA TTATCTGATGAAGAAGGAAGAGAACACTTTGATAAAACCTTTCAGGCAGGTATCTTTTCATCAGGCTAATATTTTATACC AGTTGATAATTGATATGATATTCTTACTTTGAATAGTTCTGTATTCATTAATGTTTTAATGTCCTACATGAATTGGTAGT TTGCTTTGGAGTGGAGCAAAATGTCCTACATGAATCATTACCCAGATGGACTTCTATATATTGCTGTAGATACATTACAA ATTAGAGATTTGAATTTATGTTAATCTGGAATTTACAAATTGGGCCTTGTTTTGATAGAATAGTATAAAAAGTTAACTTT GAGATCAACTCTTAGTTTAGCTTAGTAACATTTTTACTTAGATACTAAAGGTTTCCCTCGTTCTTGGTTTCTATTATTAG GTGGGTGAACCATCAGAAGGCGCAAGTTCTGAAACTAAAGTAACACCATCTATTTCACCAAATAAGTCTGCAATTTGGAG AAACTTCACATTTGTTTCATTGGCAATTTTTATCCCACTGGTTTCTGTGTTAGCCTTCTGCATGTTGTACATAGAAACGT GTCCTTTCTGAAAGCTTTTGGTGGCTAAGTCATGACCTAGCATGTAGAAAATTTGTTGTTTTGTGCAGTTGTGCTTCTCT CAAGTCTTTTAGATTGTGTATTGTTTGTATATTCATCTATTTATGTGATCTTAGAGTGGATGTAAACTAATATTGCAATT CTTTTGTTGATTATTCTATCACGAGTGCTTACCAGATGAAGAGCTTGTCTCATAAAGGTGCAAATTATTAAGATATTGAG AGATGCAACTATGATAGAAAGATGAATAGTTGGGGGATTCTGCCCCTCCAATGTGAGGGAAGTTTGATAGGGTATCTTGT TTATAACAGTACTAAAGCAAGATATGGTGTTTACAGTAAATGGCATGTTTGTTTGTAACCAAGATAATTATGTTGATTTT ATGTCAATATCAA
CDS sequence (LotjaGi2g1v0288000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAATTTGCTAACAAAGTTCAAGGCGGCTTTAATGCTGGAGATACAGCTTTTGGGAAACTTCACTCACTCAAAGG GTTCTCAACTAAAGAAAATGATATGCAAGAAATGGAGATGTCCCTGCAAGCTTTAACAGAAATAGACCACCGCTTAGCCT ATTCTTCTGAGAAGCTGGTGAACTTGCATGCACTTTATATTTATCTGTTGGCCCGTGAAAATGATCTTGAACCAATGGAT TCAAAGAATGACCTCATCTTGGCAAATATGTTTGAGAAGGCAATGACATCAGATCTATTGTCTGGCATTTTAGATTCTGA GGTAAGAGAGCTGGACAATTTCATCGACACTCTACAGGAAGAAATTGTTGATGCTCGTCATAAAATATTTTCATGCAGAC ATCTGACTGAGGTTTACTTTATAATGGATGAAAAATTGCACGACTCGGAAGAGTCCGTGAAGCAGTTTCAACAGCAGTTA TTGGAGTTGAAGATGCAATCATCCCAGTTGCAGAAAACCCTTGTGGCTTTCCAACATGAGAGTTGGGAAACGGGGAAGAC CTTGAGTTTATCAGAAAATGGTCAGCTGATAGATGCTAAAGCAAAATCCAAGGATCAGATGGTTGAACAACGAAGATATA TTCTGCGAATGCTTGAGAAGTCCTTAGCACGGGAGCTAGATCTTGAAAAGAAGCTAGCAGAGTCAAGAAAAAATGAAGAG CTAAAGTTGAAACTCCGCTACACGGAACAAGTAGCATTTTATATGGAAGAAGCAGCGGAAGTAGTTTGGGGGAGATTTCT AGAGGCAGACAATGCTTCGGAGGTGTTGATGGGAATTTCTAAAGGTATAATGGGACGCCTCCAAGTTGCTGAATTCAACC TCAATGGCTCTATGCAACGCGAAAATGAGCTGAAATCAAAAGTTAAAAATTTCATAGAACAACTTAAGGGTAAAGATGCT GCTTTAGAGAAGCTTGAGAAATGTAATGTTCAATATCTCAAGGAAAATTCTGAGGTGTTGGCTTTGAGGGAAAAGGTGAA ATTTCTTGAAGAAGAACGAAAAGATTTTGAGCATCGGATAAATGCTTTGACAGAAGAAAATGAAGCATGTCATGAACAAC TCATTGAGGCGGAAAGCTTTGTCGAGTCTCTAAAAGAAAGCATTGACATAGCAGAAAATCGGGCGGAGAATGCAGAAGCA AAGGTCACACAGTTAACTGAGACCAACTTGGAACTTACTGAAGAGCTGAATTTCCTTAAAGGGAGTGCTAGCACTGCAGA GAAAAAGGTTGGTTCACTAGAGAAGCAACTAAGAGAATTAGATATCCAGCTACAGAATGCAAAGGCATCTTCTGAAGCAA GTCAAGAACAGCAGAATATGTTATACACAGCAATATGGGATATGGAAATTTTAATTGAAGAGCTAAAATCAAAGGTTTCA AATGCTGAAAGTAATAAAGATAGTGCAGAAGAGCAATGCATTGTGCTATCTGAGACTAACTTTGAACTAAATAAAGAATT GGATCTCCTGAGGTCCAGAATGAGTAGCCTGAAAACATCTTTCGATCAAGCTAGAAAATCAAAATTATCAAGTGCAAAAG AAATTGATACTGGAACTAAGTTCATCATGGATATGATAGCACAGCTCGCCACTGAAAGGGGGCGCATCAATAAACAGCTA GAGGCTTTAAAACAGGAAAATAAAAGTTTGGTAAAAAAGTTAACTGGGACCAAAATTGGTGTCCCTCTAGATGCATGCAC CAATGAACTAAATAGCAGAAATGAAGATCAAGCTTCCAACATTGACTCAAGCAATGATAGCTGTACAAAATTATCTGATG AAGAAGGAAGAGAACACTTTGATAAAACCTTTCAGGTGGGTGAACCATCAGAAGGCGCAAGTTCTGAAACTAAAGTAACA CCATCTATTTCACCAAATAAGTCTGCAATTTGGAGAAACTTCACATTTGTTTCATTGGCAATTTTTATCCCACTGGTTTC TGTGTTAGCCTTCTGCATGTTGTACATAGAAACGTGTCCTTTCTGA
Protein sequence (LotjaGi2g1v0288000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEFANKVQGGFNAGDTAFGKLHSLKGFSTKENDMQEMEMSLQALTEIDHRLAYSSEKLVNLHALYIYLLARENDLEPMD SKNDLILANMFEKAMTSDLLSGILDSEVRELDNFIDTLQEEIVDARHKIFSCRHLTEVYFIMDEKLHDSEESVKQFQQQL LELKMQSSQLQKTLVAFQHESWETGKTLSLSENGQLIDAKAKSKDQMVEQRRYILRMLEKSLARELDLEKKLAESRKNEE LKLKLRYTEQVAFYMEEAAEVVWGRFLEADNASEVLMGISKGIMGRLQVAEFNLNGSMQRENELKSKVKNFIEQLKGKDA ALEKLEKCNVQYLKENSEVLALREKVKFLEEERKDFEHRINALTEENEACHEQLIEAESFVESLKESIDIAENRAENAEA KVTQLTETNLELTEELNFLKGSASTAEKKVGSLEKQLRELDIQLQNAKASSEASQEQQNMLYTAIWDMEILIEELKSKVS NAESNKDSAEEQCIVLSETNFELNKELDLLRSRMSSLKTSFDQARKSKLSSAKEIDTGTKFIMDMIAQLATERGRINKQL EALKQENKSLVKKLTGTKIGVPLDACTNELNSRNEDQASNIDSSNDSCTKLSDEEGREHFDKTFQVGEPSEGASSETKVT PSISPNKSAIWRNFTFVSLAIFIPLVSVLAFCMLYIETCPF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 653 | 653 | - | – | |
| PANTHER | 4 | 674 | 671 | 3.0E-289 | ||
| PANTHER | 4 | 674 | 671 | 3.0E-289 | ||
| Coils | 108 | 128 | 21 | - | – | |
| Coils | 146 | 173 | 28 | - | – | |
| SUPERFAMILY | 318 | 572 | 255 | 5.67E-9 | – | |
| Coils | 332 | 415 | 84 | - | – | |
| Gene3D | 381 | 470 | 90 | 9.4E-6 | – | |
| Coils | 423 | 457 | 35 | - | – | |
| Coils | 465 | 499 | 35 | - | – | |
| Coils | 546 | 573 | 28 | - | – | |
| MobiDBLite | 592 | 607 | 16 | - | – | |
| MobiDBLite | 592 | 612 | 21 | - | – | |
| MobiDBLite | 623 | 642 | 20 | - | – | |
| MobiDBLite | 628 | 642 | 15 | - | – | |
| Phobius | 654 | 676 | 23 | - | – | |
| TMHMM | 654 | 676 | 23 | - | – | |
| Phobius | 677 | 681 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0288000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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