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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0300100 |
| Transcript ID | LotjaGi2g1v0300100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argonaute family protein; TAIR: AT1G69440.1 Argonaute family protein; Swiss-Prot: sp|Q9C793|AGO7_ARATH Protein argonaute 7; TrEMBL-Plants: tr|D3GBV1|D3GBV1_LOTJA Reduced leaflet 3; Found in the gene: LotjaGi2g1v0300100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77444744..77449434) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTAATTACCTCACCTTCTTCCCACTTCTCACTAACCTTTGGTTTGCTCTTTCTTCCTATTCTGTCTCTCTTTGAACA GTTCTCTAGTTTCTTGTTGTGGCATCTTCAACCTTGTATTCAAGGCATAGAATCCAAACCAACCCCATCTTCTCATATTC TCTTATTCTCTCAAAACTCCCAATCAAATAATGGAAGAGACAGAGGATTCCACCAATGCTACCCAGAAACTCACCACAAA AACAAGAAGCTTCATCAATGGAGCCAACTCTCATGAGCATCACCACTATCATCAGCATCATCATCTGCTACAGTACTCAG CTCAGGTTGGCTTCTGCAACAACAACAACCAGAACAAGTATCAGAGGTACTACCCAGCACTTCTTCCTCTACCTTCTCTT ATACCTCTTCAACAACTACCTCTGATTCCACCCTTCCCTCAAAACCAGAGCATCAATTCAAAAACCCATTTGCAGAAACC TCCATGCAAACTCAATAGTTCTCCTTCTTCGGATTACAAGCTCTCTGAACCAGCTCTTGCTCCTGGTAAGTAGGAGCATT TTCCCTTCCATTTCAAACTCACCCTTTTGTTTGCAATCTTGTTTTGTTAGTAGAGAAGTTAAGAATTTGTTCTTTAGGCT TGCTTGTTTGGTTTACCTGGAAAAAAAGTTTCCTAATTTTCTTGAACTTCTCAGAGAAAAACTACTTCCTGGTTGTATCA TATAGAAAGGAACATTGCATTTAGGTTGTAATTTATCTCTGAAGTTCAATGATGTTCGATTTGATCCAGATTTTGTTTTT ATTTTGCTGCTTTTAATGTGAAGGTTTGCATGAGGACTCTGTTTTTCAAACAATAACAAGGCCTAACTACATTAGTAACT ATGAATCTTTATTTACTCTCCTCTATATTGATGCTACCATTTTTTTGAAGCTTTAAGTGTGTGTTTGATTGAGCATTCTC AACCTTGAGCTTACCTATTGAATTGATTTTGGTTAAAAGTGAGATTTTAAGTGAAATGATTTATTTTTTGATACCTCTGG CTTTTTGTGATTGTGAAGAGTGATAATTTCTAAACTTGTTGATGCCAAAATAATTTGTAGTTGTTTCTTAGCAAACTAAG TTGTGGCTTAAATCAATTTTGAGCTAATATGTAAACCCAACTACTGCATGAGGAGAAGTAAGTTTGAGCATTTCAATCCA GATTAGCTTAGTGAAACATACATCGAAACATAGGTCCCAAATTTCTGTGAATTCACCAAGTGTTTGAAGTGCTCAGCTTA GGTTCCAAAATCCACACTTCAAACACTTGGTCAAGTTCTCAGAATTTGGAGAGAATAGTAATGATTAACTTGTGAATATT GGAGCATGAGAAAAGTTTATACAATCTAAAGGAAATTCTTTTAATAAAAGATTGTTTCTAAACACACAAACAACACAATG TTATGTAACTATAATTTATTAGAAAAATTTATCACCTCAACTTTTCTAGGTATTTTGTACTTTCTGTGGAAGCAAAATAA ATTGGAAAAATGATGAACCATCTTGTTTCACATACAGATTCAGCCCCAAAGGAACTTCAGCGGCAAACTAAGGAATCCTT TAAAGGAGATGATGGGAGGAAACTCATTCCAACAAGGAAGCAACAGGACTTAATTGTTGCAAGGAGGCCAGACTCAGGTG GAAAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAGTTTGATCCATCCCAAAAAATTTATCATTAC AATGTTGAAATTACTCCTCATCCCTCCAAGGATGTGGCAAGGGAAATCAAACAGAAATTGGTAAATAACAATTCTGCTAT GCTCTCGGGTGCTCTGCCGGCATATGATGGGAGACAGAATCTTTACAGTTCAATTGAATTCCAAAACGATAAGCTTGAGT TCTACATTAGCCTCCTAATCCCAACAAGCAAACTGACTTCACCTTATGGAGAAATGTATGACTTGAAGGAGAAGAAAGAA CAGCATAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTGATGGGAAGGAGTTAACTAACTACTTGAGCAAAGA GGGTGATGAATGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGCCCGACTGAGAAAT GCATACCTGTAGGGAGATCATTCTACTCAAATTCAATGGGAAGAAGCAAAGACATTGGGGGAGGAGCTGTGGGATTGAGG GGATTCTTTCAGAGTCTTCGACCGACCCAACAAGGACTTGCTCTCAATCTCGATTTCTCAGTAACTGCATTCCATGAGAG TATAGGAGTGATTTCATACTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAATTAACTT GTGAAGAAAGGAAGGAAGTGGAGAAGGCACTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAACAGTTCAGAGATAC CGTGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGACAGAATCTGAGGCTTGTGAA TTACTTCAAAGATCACTATAACTACGACATACAATTCCGAAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCTTGTT ATCTTCCTATGGAGCTTTGTGTGATCTGCGAAGGCCAGAAATTCCTCGGGAAACTGTCGGATGATCAGACAGCAAGAATA CTCAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATCGAAGGAGTCATGAGAGGAAATGTTGGGTCTACCAG GTAACAAGATACAATAGTTGTTTCACTTTATTGAACATTGTGTATAATCTTGTACATTATTACTATGGAGCATTTGCTTT CTTTCTTTTTCATGTTTATGTTGTTTTGGTTTCTAATGCCTTAAAAGTAAAATCCTTTTGACAGTGGTGAGCAGGAAAGA GAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTCACCCTCCCAAACTAAAGCTTGGAGA TGGAGGTCATGTGAGAAACCTTACTCCTTCACGCCATGACCGTCAGTGGAACCTTCTAGATGGCAATGTCTTTGAAGGAA CTACAATTGAAAGGTGGGCACTTGTAAGCTTTGGGGGCACCCCTGAGCAGAAGTCTAATATCCCTAGATTCATAAACCAA TTATGTCAAAGGTGTGAACAACTGGGCATTTTTCTTAATAAGAACACAGTTATGAGTCCCCAGTTTGAATCAAGCCAGGT TCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTCCAGCTTCTTATTT GTGTAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGGATTGCTGAGACAAGTATCGGTCTCATAAGCCAATGC TGCCTGTACCCAAATCTGTGCAAGTTAAGTTCACAGTTCTTGGCAAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGG ATGCACAGTTGCCCTCTACAACTCACTGCCTTCTCAATTACCACGCCTCTTTCACATCGATGAGCCCGTGATATTCATGG GAGCCGATGTGACTCATCCTCATCCTCTTGATGATTCCAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCA ACAGCAAACAAGTACATTTCAAGAATAAGGTCCCAAACACACAGACAAGAAATTATCCAGGATCTTGGTCCAATGGTGGG GGAATTGCTTGATGATTTTTATCAGGAGGTAGAGAAACTCCCCAACCGAATAGTTTTCTTTAGAGACGGAGTTAGCGAAA CACAATTTCACAAAGTGATGCAAGAGGAACTGCAATCCATAAGACACGCATGTGAAAGGTTTCCTGATTATAAACCTCTC ATTACCTTTGCAGTTGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTCCCGGTGAAACTGATCCGTCTTCCCCTCA GAATAACTTTTTATACGAAAACATTCCTCCCGGGACCGTGGTCGATTCAGTGATTACTCATCCGAAGGAATTTGATTTCT ATCTCTGTAGTCATTGGGGTGTGAAAGGAACAAGCAGACCAACTCATTACCATGTCTTGTGGGATGAAAACCAGTTTACT TCTGATGAGCTTCAGAAGCTGGTTTACAATTTGTGCTACACTTTTGTTAGGTGTACAAAGCCAATTTCTTTGGTGCCTCC TGCATATTATGCACATTTAGCTGCATACAGAGGAAGACTTTACCTTGAGCGATCAGAGTCCTTAGGTTTGTTCAGAAACA CATCTACATTATCAAGAGCTGCTCCTCCAAAGACAGCACCACTTCCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTC TACTGCTAGTGATAACTCTTCTGGACATGCCATTTGATTTTTAGATAGTGTTAATTACATGACCAGCCTTTAGTTTGTGC AGGATAAAATATCAGTGGAGTATAAGAAATTGAAGAATATGTAATCTTTTCTTTGTCAAGGCCAATGATTCAAGTTGTTC AGAATGCATTTCTAACTGTTCATTTATTTTCTTGTTTAATTTTTACATTCATAAGATAATTAGTACTAATTTACATTTGA TGTTGAAAGTTGAAACTGAATTACATCTGAACCATCTTTACACATCTGTGA
CDS sequence (LotjaGi2g1v0300100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGACAGAGGATTCCACCAATGCTACCCAGAAACTCACCACAAAAACAAGAAGCTTCATCAATGGAGCCAACTC TCATGAGCATCACCACTATCATCAGCATCATCATCTGCTACAGTACTCAGCTCAGGTTGGCTTCTGCAACAACAACAACC AGAACAAGTATCAGAGGTACTACCCAGCACTTCTTCCTCTACCTTCTCTTATACCTCTTCAACAACTACCTCTGATTCCA CCCTTCCCTCAAAACCAGAGCATCAATTCAAAAACCCATTTGCAGAAACCTCCATGCAAACTCAATAGTTCTCCTTCTTC GGATTACAAGCTCTCTGAACCAGCTCTTGCTCCTGATTCAGCCCCAAAGGAACTTCAGCGGCAAACTAAGGAATCCTTTA AAGGAGATGATGGGAGGAAACTCATTCCAACAAGGAAGCAACAGGACTTAATTGTTGCAAGGAGGCCAGACTCAGGTGGA AAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAGTTTGATCCATCCCAAAAAATTTATCATTACAA TGTTGAAATTACTCCTCATCCCTCCAAGGATGTGGCAAGGGAAATCAAACAGAAATTGGTAAATAACAATTCTGCTATGC TCTCGGGTGCTCTGCCGGCATATGATGGGAGACAGAATCTTTACAGTTCAATTGAATTCCAAAACGATAAGCTTGAGTTC TACATTAGCCTCCTAATCCCAACAAGCAAACTGACTTCACCTTATGGAGAAATGTATGACTTGAAGGAGAAGAAAGAACA GCATAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTGATGGGAAGGAGTTAACTAACTACTTGAGCAAAGAGG GTGATGAATGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGCCCGACTGAGAAATGC ATACCTGTAGGGAGATCATTCTACTCAAATTCAATGGGAAGAAGCAAAGACATTGGGGGAGGAGCTGTGGGATTGAGGGG ATTCTTTCAGAGTCTTCGACCGACCCAACAAGGACTTGCTCTCAATCTCGATTTCTCAGTAACTGCATTCCATGAGAGTA TAGGAGTGATTTCATACTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAATTAACTTGT GAAGAAAGGAAGGAAGTGGAGAAGGCACTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAACAGTTCAGAGATACCG TGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGACAGAATCTGAGGCTTGTGAATT ACTTCAAAGATCACTATAACTACGACATACAATTCCGAAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCTTGTTAT CTTCCTATGGAGCTTTGTGTGATCTGCGAAGGCCAGAAATTCCTCGGGAAACTGTCGGATGATCAGACAGCAAGAATACT CAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATCGAAGGAGTCATGAGAGGAAATGTTGGGTCTACCAGTG GTGAGCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTCACCCTCCCAAA CTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTTACTCCTTCACGCCATGACCGTCAGTGGAACCTTCTAGATGGCAA TGTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTTGTAAGCTTTGGGGGCACCCCTGAGCAGAAGTCTAATATCCCTA GATTCATAAACCAATTATGTCAAAGGTGTGAACAACTGGGCATTTTTCTTAATAAGAACACAGTTATGAGTCCCCAGTTT GAATCAAGCCAGGTTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCT CCAGCTTCTTATTTGTGTAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGGATTGCTGAGACAAGTATCGGTC TCATAAGCCAATGCTGCCTGTACCCAAATCTGTGCAAGTTAAGTTCACAGTTCTTGGCAAATTTGGCCCTCAAAATCAAT GCCAAAGTTGGTGGATGCACAGTTGCCCTCTACAACTCACTGCCTTCTCAATTACCACGCCTCTTTCACATCGATGAGCC CGTGATATTCATGGGAGCCGATGTGACTCATCCTCATCCTCTTGATGATTCCAGTCCATCTGTTGCTGCTGTTGTTGGTA GCATGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCCCAAACACACAGACAAGAAATTATCCAGGATCTT GGTCCAATGGTGGGGGAATTGCTTGATGATTTTTATCAGGAGGTAGAGAAACTCCCCAACCGAATAGTTTTCTTTAGAGA CGGAGTTAGCGAAACACAATTTCACAAAGTGATGCAAGAGGAACTGCAATCCATAAGACACGCATGTGAAAGGTTTCCTG ATTATAAACCTCTCATTACCTTTGCAGTTGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTCCCGGTGAAACTGAT CCGTCTTCCCCTCAGAATAACTTTTTATACGAAAACATTCCTCCCGGGACCGTGGTCGATTCAGTGATTACTCATCCGAA GGAATTTGATTTCTATCTCTGTAGTCATTGGGGTGTGAAAGGAACAAGCAGACCAACTCATTACCATGTCTTGTGGGATG AAAACCAGTTTACTTCTGATGAGCTTCAGAAGCTGGTTTACAATTTGTGCTACACTTTTGTTAGGTGTACAAAGCCAATT TCTTTGGTGCCTCCTGCATATTATGCACATTTAGCTGCATACAGAGGAAGACTTTACCTTGAGCGATCAGAGTCCTTAGG TTTGTTCAGAAACACATCTACATTATCAAGAGCTGCTCCTCCAAAGACAGCACCACTTCCTAAACTTAGTGAAAACATCA AGAAGCTCATGTTCTACTGCTAG
Protein sequence (LotjaGi2g1v0300100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEETEDSTNATQKLTTKTRSFINGANSHEHHHYHQHHHLLQYSAQVGFCNNNNQNKYQRYYPALLPLPSLIPLQQLPLIP PFPQNQSINSKTHLQKPPCKLNSSPSSDYKLSEPALAPDSAPKELQRQTKESFKGDDGRKLIPTRKQQDLIVARRPDSGG KEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVAREIKQKLVNNNSAMLSGALPAYDGRQNLYSSIEFQNDKLEF YISLLIPTSKLTSPYGEMYDLKEKKEQHKLFRINIKLVSKIDGKELTNYLSKEGDEWIPLPQDYLHALDVVLRESPTEKC IPVGRSFYSNSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNLDFSVTAFHESIGVISYLQKRLEFLRDLSQRKTTQLTC EERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGQNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCY LPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGNVGSTSGEQEREFKLQVSREMTKLTGRILHPPK LKLGDGGHVRNLTPSRHDRQWNLLDGNVFEGTTIERWALVSFGGTPEQKSNIPRFINQLCQRCEQLGIFLNKNTVMSPQF ESSQVLNNVTLLESKLKRIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGLISQCCLYPNLCKLSSQFLANLALKIN AKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDSSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDL GPMVGELLDDFYQEVEKLPNRIVFFRDGVSETQFHKVMQEELQSIRHACERFPDYKPLITFAVVQKRHHTRLFPFPGETD PSSPQNNFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPI SLVPPAYYAHLAAYRGRLYLERSESLGLFRNTSTLSRAAPPKTAPLPKLSENIKKLMFYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 87 | 140 | 54 | - | – | |
| MobiDBLite | 87 | 110 | 24 | - | – | |
| MobiDBLite | 124 | 140 | 17 | - | – | |
| PANTHER | 144 | 984 | 841 | 0.0 | – | |
| PANTHER | 144 | 984 | 841 | 0.0 | – | |
| Pfam | 166 | 312 | 147 | 8.7E-27 | ||
| SMART | 321 | 373 | 53 | 3.4E-22 | ||
| Pfam | 322 | 371 | 50 | 4.4E-17 | ||
| Gene3D | 367 | 494 | 128 | 1.7E-26 | – | |
| SUPERFAMILY | 368 | 526 | 159 | 1.43E-39 | ||
| SMART | 381 | 512 | 132 | 1.3E-4 | ||
| ProSiteProfiles | 381 | 490 | 110 | 21.849 | ||
| Pfam | 384 | 506 | 123 | 1.5E-22 | ||
| CDD | 384 | 489 | 106 | 8.0194E-28 | – | |
| CDD | 538 | 980 | 443 | 0.0 | – | |
| Gene3D | 555 | 732 | 178 | 2.4E-37 | – | |
| SUPERFAMILY | 654 | 981 | 328 | 5.56E-82 | ||
| SMART | 669 | 981 | 313 | 9.5E-109 | ||
| ProSiteProfiles | 669 | 981 | 313 | 41.691 | ||
| Pfam | 670 | 978 | 309 | 3.4E-93 | ||
| Gene3D | 740 | 1020 | 281 | 5.3E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0300100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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