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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0300100 |
| Transcript ID | LotjaGi2g1v0300100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argonaute family protein; TAIR: AT1G69440.1 Argonaute family protein; Swiss-Prot: sp|Q9C793|AGO7_ARATH Protein argonaute 7; TrEMBL-Plants: tr|D3GBV1|D3GBV1_LOTJA Reduced leaflet 3; Found in the gene: LotjaGi2g1v0300100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77445026..77449287) extracted from Lotus japonicus Gifu genome v1.2.
TCTTCTCATATTCTCTTATTCTCTCAAAACTCCCAATCAAATAATGGAAGAGACAGAGGATTCCACCAATGCTACCCAGA AACTCACCACAAAAACAAGAAGCTTCATCAATGGAGCCAACTCTCATGAGCATCACCACTATCATCAGCATCATCATCTG CTACAGTACTCAGCTCAGGTTGGCTTCTGCAACAACAACAACCAGAACAAGTATCAGAGGTACTACCCAGCACTTCTTCC TCTACCTTCTCTTATACCTCTTCAACAACTACCTCTGATTCCACCCTTCCCTCAAAACCAGAGCATCAATTCAAAAACCC ATTTGCAGAAACCTCCATGCAAACTCAATAGTTCTCCTTCTTCGGATTACAAGCTCTCTGAACCAGCTCTTGCTCCTGGT AAGTAGGAGCATTTTCCCTTCCATTTCAAACTCACCCTTTTGTTTGCAATCTTGTTTTGTTAGTAGAGAAGTTAAGAATT TGTTCTTTAGGCTTGCTTGTTTGGTTTACCTGGAAAAAAAGTTTCCTAATTTTCTTGAACTTCTCAGAGAAAAACTACTT CCTGGTTGTATCATATAGAAAGGAACATTGCATTTAGGTTGTAATTTATCTCTGAAGTTCAATGATGTTCGATTTGATCC AGATTTTGTTTTTATTTTGCTGCTTTTAATGTGAAGGTTTGCATGAGGACTCTGTTTTTCAAACAATAACAAGGCCTAAC TACATTAGTAACTATGAATCTTTATTTACTCTCCTCTATATTGATGCTACCATTTTTTTGAAGCTTTAAGTGTGTGTTTG ATTGAGCATTCTCAACCTTGAGCTTACCTATTGAATTGATTTTGGTTAAAAGTGAGATTTTAAGTGAAATGATTTATTTT TTGATACCTCTGGCTTTTTGTGATTGTGAAGAGTGATAATTTCTAAACTTGTTGATGCCAAAATAATTTGTAGTTGTTTC TTAGCAAACTAAGTTGTGGCTTAAATCAATTTTGAGCTAATATGTAAACCCAACTACTGCATGAGGAGAAGTAAGTTTGA GCATTTCAATCCAGATTAGCTTAGTGAAACATACATCGAAACATAGGTCCCAAATTTCTGTGAATTCACCAAGTGTTTGA AGTGCTCAGCTTAGGTTCCAAAATCCACACTTCAAACACTTGGTCAAGTTCTCAGAATTTGGAGAGAATAGTAATGATTA ACTTGTGAATATTGGAGCATGAGAAAAGTTTATACAATCTAAAGGAAATTCTTTTAATAAAAGATTGTTTCTAAACACAC AAACAACACAATGTTATGTAACTATAATTTATTAGAAAAATTTATCACCTCAACTTTTCTAGGTATTTTGTACTTTCTGT GGAAGCAAAATAAATTGGAAAAATGATGAACCATCTTGTTTCACATACAGATTCAGCCCCAAAGGAACTTCAGCGGCAAA CTAAGGAATCCTTTAAAGGAGATGATGGGAGGAAACTCATTCCAACAAGGAAGCAACAGGACTTAATTGTTGCAAGGAGG CCAGACTCAGGTGGAAAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAGTTTGATCCATCCCAAAA AATTTATCATTACAATGTTGAAATTACTCCTCATCCCTCCAAGGATGTGGCAAGGGAAATCAAACAGAAATTGGTAAATA ACAATTCTGCTATGCTCTCGGGTGCTCTGCCGGCATATGATGGGAGACAGAATCTTTACAGTTCAATTGAATTCCAAAAC GATAAGCTTGAGTTCTACATTAGCCTCCTAATCCCAACAAGCAAACTGACTTCACCTTATGGAGAAATGTATGACTTGAA GGAGAAGAAAGAACAGCATAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTGATGGGAAGGAGTTAACTAACT ACTTGAGCAAAGAGGGTGATGAATGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGC CCGACTGAGAAATGCATACCTGTAGGGAGATCATTCTACTCAAATTCAATGGGAAGAAGCAAAGACATTGGGGGAGGAGC TGTGGGATTGAGGGGATTCTTTCAGAGTCTTCGACCGACCCAACAAGGACTTGCTCTCAATCTCGATTTCTCAGTAACTG CATTCCATGAGAGTATAGGAGTGATTTCATACTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACA ACTCAATTAACTTGTGAAGAAAGGAAGGAAGTGGAGAAGGCACTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAAC AGTTCAGAGATACCGTGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGGATGGACAGAATC TGAGGCTTGTGAATTACTTCAAAGATCACTATAACTACGACATACAATTCCGAAAATTGCCATGCTTGCAGATTAGTAGG AGTAAACCTTGTTATCTTCCTATGGAGCTTTGTGTGATCTGCGAAGGCCAGAAATTCCTCGGGAAACTGTCGGATGATCA GACAGCAAGAATACTCAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATCGAAGGAGTCATGAGAGGAAATG TTGGGTCTACCAGGTAACAAGATACAATAGTTGTTTCACTTTATTGAACATTGTGTATAATCTTGTACATTATTACTATG GAGCATTTGCTTTCTTTCTTTTTCATGTTTATGTTGTTTTGGTTTCTAATGCCTTAAAAGTAAAATCCTTTTGACAGTGG TGAGCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTCACCCTCCCAAAC TAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTTACTCCTTCACGCCATGACCGTCAGTGGAACCTTCTAGATGGCAAT GTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTTGTAAGCTTTGGGGGCACCCCTGAGCAGAAGTCTAATATCCCTAG ATTCATAAACCAATTATGTCAAAGGTGTGAACAACTGGGCATTTTTCTTAATAAGAACACAGTTATGAGTCCCCAGTTTG AATCAAGCCAGGTTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTC CAGCTTCTTATTTGTGTAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGGATTGCTGAGACAAGTATCGGTCT CATAAGCCAATGCTGCCTGTACCCAAATCTGTGCAAGTTAAGTTCACAGTTCTTGGCAAATTTGGCCCTCAAAATCAATG CCAAAGTTGGTGGATGCACAGTTGCCCTCTACAACTCACTGCCTTCTCAATTACCACGCCTCTTTCACATCGATGAGCCC GTGATATTCATGGGAGCCGATGTGACTCATCCTCATCCTCTTGATGATTCCAGTCCATCTGTTGCTGCTGTTGTTGGTAG CATGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCCCAAACACACAGACAAGAAATTATCCAGGATCTTG GTCCAATGGTGGGGGAATTGCTTGATGATTTTTATCAGGAGGTAGAGAAACTCCCCAACCGAATAGTTTTCTTTAGAGAC GGAGTTAGCGAAACACAATTTCACAAAGTGATGCAAGAGGAACTGCAATCCATAAGACACGCATGTGAAAGGTTTCCTGA TTATAAACCTCTCATTACCTTTGCAGTTGTGCAGAAGAGGCATCACACAAGGTTGTTTCCCTTTCCCGGTGAAACTGATC CGTCTTCCCCTCAGAATAACTTTTTATACGAAAACATTCCTCCCGGGACCGTGGTCGATTCAGTGATTACTCATCCGAAG GAATTTGATTTCTATCTCTGTAGTCATTGGGGTGTGAAAGGAACAAGCAGACCAACTCATTACCATGTCTTGTGGGATGA AAACCAGTTTACTTCTGATGAGCTTCAGAAGCTGGTTTACAATTTGTGCTACACTTTTGTTAGGTGTACAAAGCCAATTT CTTTGGTGCCTCCTGCATATTATGCACATTTAGCTGCATACAGAGGAAGACTTTACCTTGAGCGATCAGAGTCCTTAGGT TTGTTCAGAAACACATCTACATTATCAAGAGCTGCTCCTCCAAAGACAGCACCACTTCCTAAACTTAGTGAAAACATCAA GAAGCTCATGTTCTACTGCTAG
CDS sequence (LotjaGi2g1v0300100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGACAGAGGATTCCACCAATGCTACCCAGAAACTCACCACAAAAACAAGAAGCTTCATCAATGGAGCCAACTC TCATGAGCATCACCACTATCATCAGCATCATCATCTGCTACAGTACTCAGCTCAGGTTGGCTTCTGCAACAACAACAACC AGAACAAGTATCAGAGGTACTACCCAGCACTTCTTCCTCTACCTTCTCTTATACCTCTTCAACAACTACCTCTGATTCCA CCCTTCCCTCAAAACCAGAGCATCAATTCAAAAACCCATTTGCAGAAACCTCCATGCAAACTCAATAGTTCTCCTTCTTC GGATTACAAGCTCTCTGAACCAGCTCTTGCTCCTGTGATGAACCATCTTGTTTCACATACAGATTCAGCCCCAAAGGAAC TTCAGCGGCAAACTAAGGAATCCTTTAAAGGAGATGATGGGAGGAAACTCATTCCAACAAGGAAGCAACAGGACTTAATT GTTGCAAGGAGGCCAGACTCAGGTGGAAAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAGTTTGA TCCATCCCAAAAAATTTATCATTACAATGTTGAAATTACTCCTCATCCCTCCAAGGATGTGGCAAGGGAAATCAAACAGA AATTGGTAAATAACAATTCTGCTATGCTCTCGGGTGCTCTGCCGGCATATGATGGGAGACAGAATCTTTACAGTTCAATT GAATTCCAAAACGATAAGCTTGAGTTCTACATTAGCCTCCTAATCCCAACAAGCAAACTGACTTCACCTTATGGAGAAAT GTATGACTTGAAGGAGAAGAAAGAACAGCATAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTGATGGGAAGG AGTTAACTAACTACTTGAGCAAAGAGGGTGATGAATGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTT CTGAGGGAAAGCCCGACTGAGAAATGCATACCTGTAGGGAGATCATTCTACTCAAATTCAATGGGAAGAAGCAAAGACAT TGGGGGAGGAGCTGTGGGATTGAGGGGATTCTTTCAGAGTCTTCGACCGACCCAACAAGGACTTGCTCTCAATCTCGATT TCTCAGTAACTGCATTCCATGAGAGTATAGGAGTGATTTCATACTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCT CAAAGGAAGACAACTCAATTAACTTGTGAAGAAAGGAAGGAAGTGGAGAAGGCACTGAAGAACATCAGGGTCTTTGTTTG CCACAGAGAAACAGTTCAGAGATACCGTGTCTACGGCTTAACTGAGGAGGCTACTGAAAATCTTTGGTTTGCTGACAGGG ATGGACAGAATCTGAGGCTTGTGAATTACTTCAAAGATCACTATAACTACGACATACAATTCCGAAAATTGCCATGCTTG CAGATTAGTAGGAGTAAACCTTGTTATCTTCCTATGGAGCTTTGTGTGATCTGCGAAGGCCAGAAATTCCTCGGGAAACT GTCGGATGATCAGACAGCAAGAATACTCAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATCGAAGGAGTCA TGAGAGGAAATGTTGGGTCTACCAGTGGTGAGCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTG ACTGGGAGAATTCTTCACCCTCCCAAACTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTTACTCCTTCACGCCATGA CCGTCAGTGGAACCTTCTAGATGGCAATGTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTTGTAAGCTTTGGGGGCA CCCCTGAGCAGAAGTCTAATATCCCTAGATTCATAAACCAATTATGTCAAAGGTGTGAACAACTGGGCATTTTTCTTAAT AAGAACACAGTTATGAGTCCCCAGTTTGAATCAAGCCAGGTTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAAGAG AATCCAGAGGACTGCCTCAAACAATCTCCAGCTTCTTATTTGTGTAATGGAGAGAAAACACAAAGGGTATGCAGACTTGA AACGGATTGCTGAGACAAGTATCGGTCTCATAAGCCAATGCTGCCTGTACCCAAATCTGTGCAAGTTAAGTTCACAGTTC TTGGCAAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCCCTCTACAACTCACTGCCTTCTCAATT ACCACGCCTCTTTCACATCGATGAGCCCGTGATATTCATGGGAGCCGATGTGACTCATCCTCATCCTCTTGATGATTCCA GTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCAACAGCAAACAAGTACATTTCAAGAATAAGGTCCCAAACA CACAGACAAGAAATTATCCAGGATCTTGGTCCAATGGTGGGGGAATTGCTTGATGATTTTTATCAGGAGGTAGAGAAACT CCCCAACCGAATAGTTTTCTTTAGAGACGGAGTTAGCGAAACACAATTTCACAAAGTGATGCAAGAGGAACTGCAATCCA TAAGACACGCATGTGAAAGGTTTCCTGATTATAAACCTCTCATTACCTTTGCAGTTGTGCAGAAGAGGCATCACACAAGG TTGTTTCCCTTTCCCGGTGAAACTGATCCGTCTTCCCCTCAGAATAACTTTTTATACGAAAACATTCCTCCCGGGACCGT GGTCGATTCAGTGATTACTCATCCGAAGGAATTTGATTTCTATCTCTGTAGTCATTGGGGTGTGAAAGGAACAAGCAGAC CAACTCATTACCATGTCTTGTGGGATGAAAACCAGTTTACTTCTGATGAGCTTCAGAAGCTGGTTTACAATTTGTGCTAC ACTTTTGTTAGGTGTACAAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCACATTTAGCTGCATACAGAGGAAGACT TTACCTTGAGCGATCAGAGTCCTTAGGTTTGTTCAGAAACACATCTACATTATCAAGAGCTGCTCCTCCAAAGACAGCAC CACTTCCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAG
Protein sequence (LotjaGi2g1v0300100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEETEDSTNATQKLTTKTRSFINGANSHEHHHYHQHHHLLQYSAQVGFCNNNNQNKYQRYYPALLPLPSLIPLQQLPLIP PFPQNQSINSKTHLQKPPCKLNSSPSSDYKLSEPALAPVMNHLVSHTDSAPKELQRQTKESFKGDDGRKLIPTRKQQDLI VARRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDVAREIKQKLVNNNSAMLSGALPAYDGRQNLYSSI EFQNDKLEFYISLLIPTSKLTSPYGEMYDLKEKKEQHKLFRINIKLVSKIDGKELTNYLSKEGDEWIPLPQDYLHALDVV LRESPTEKCIPVGRSFYSNSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNLDFSVTAFHESIGVISYLQKRLEFLRDLS QRKTTQLTCEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGQNLRLVNYFKDHYNYDIQFRKLPCL QISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGNVGSTSGEQEREFKLQVSREMTKL TGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGNVFEGTTIERWALVSFGGTPEQKSNIPRFINQLCQRCEQLGIFLN KNTVMSPQFESSQVLNNVTLLESKLKRIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGLISQCCLYPNLCKLSSQF LANLALKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDSSPSVAAVVGSMNWPTANKYISRIRSQT HRQEIIQDLGPMVGELLDDFYQEVEKLPNRIVFFRDGVSETQFHKVMQEELQSIRHACERFPDYKPLITFAVVQKRHHTR LFPFPGETDPSSPQNNFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCY TFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRNTSTLSRAAPPKTAPLPKLSENIKKLMFYC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 127 | 149 | 23 | - | – | |
| MobiDBLite | 132 | 149 | 18 | - | – | |
| PANTHER | 153 | 993 | 841 | 0.0 | – | |
| PANTHER | 153 | 993 | 841 | 0.0 | – | |
| Pfam | 175 | 321 | 147 | 8.8E-27 | ||
| SMART | 330 | 382 | 53 | 3.4E-22 | ||
| Pfam | 331 | 380 | 50 | 4.4E-17 | ||
| Gene3D | 376 | 503 | 128 | 1.7E-26 | – | |
| SUPERFAMILY | 377 | 535 | 159 | 1.44E-39 | ||
| ProSiteProfiles | 390 | 499 | 110 | 21.849 | ||
| SMART | 390 | 521 | 132 | 1.3E-4 | ||
| Pfam | 393 | 515 | 123 | 1.6E-22 | ||
| CDD | 393 | 498 | 106 | 8.01607E-28 | – | |
| CDD | 547 | 989 | 443 | 0.0 | – | |
| Gene3D | 564 | 741 | 178 | 2.4E-37 | – | |
| SUPERFAMILY | 663 | 990 | 328 | 5.56E-82 | ||
| SMART | 678 | 990 | 313 | 9.5E-109 | ||
| ProSiteProfiles | 678 | 990 | 313 | 41.691 | ||
| Pfam | 679 | 987 | 309 | 3.4E-93 | ||
| Gene3D | 749 | 1029 | 281 | 5.4E-107 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0300100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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