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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0306300 |
| Transcript ID | LotjaGi2g1v0306300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidyl-prolyl cis-trans isomerase; TAIR: AT1G26940.2 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q8LDR3|CYP23_ARATH Peptidyl-prolyl cis-trans isomerase CYP23; TrEMBL-Plants: tr|B7FMU5|B7FMU5_MEDTR Peptidyl-prolyl cis-trans isomerase; Found in the gene: LotjaGi2g1v0306300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77969287..77974780) extracted from Lotus japonicus Gifu genome v1.2.
ATGATTGAGAAGATCTTTGTTAATTATGTTCTGGGTATGAGTGAAAATTGGAATCAAGTAGCTCAGTCAGTGGAAAATTC AATCTTGTTTAGGAAATATGCTTGCTTTATAGTTTATACTTTACAGATTAAACTTGTTTCTCAAATTGATATCAATTTCT TAGTTTTTGTTTGTTCCATTGAATGTGGTGTATCATATAGGTTCTTGTCTTTTTTAATGCAGACAAATTATGGGGATATT GAATTCGGTTTCTTTCCAACTGTTGCTCCCAAAACTGTTAACCACATTTTCAAGCTTGTGAGACTTGGAGGCTATAACAC TAATCATTTCTTTCGGGTATTGTTCTCTGGATACAAAGCAAGTGTGCATTGGGAATTTTTATAAAGTTGGTGGGTGGGTG TAGTGTTGCTTTGCAAGTGAATGATTTTGAATTTAATGCCCAGGTGGATAAGGGATTTGTAGCCCAAGTAGCAGATGTTG CGAATGGGAGATCGGCTCCCATGAACGAGGAACAAAGAAGAGAAGCTGAAAAAACTGTTGTTGGTGAATTCAGCCAAGTC AAACATGTTCGGGGTATTCTTTCTATGGGAAGGTTAGGTCTCTCTTGATGGAAACTGTTGGTTGTAGCCTCTTATTTCTT CTGAAGTTCTTGATTTTGTGCCTTCCTTGTTGCTCTCTTGTTTCTCTGCTAAACATTAAATTGATCTGATTTGTAGCCTC CTTGTGGTGGTTACAAATTCTCCTTAGTCTAAGATCAGTGTAACTTTTCAGCAACTAGTTGCTTAATTTTGATATGGTGT TTCTTGCTTTGTTGCATTGAGTTATATTCTTTTGGAAGTGATCTAGTTTTGGTTTAATGATTATCTTGAATTCTTGATTG TTTCATGTAGACTGAGCATTATAATACTACTTAGAGGAAAAGTGCTTACAGAATCATAGTCACTGTAGTCAAGATAGAAA TAAAAATGAAGGGGAAATTAACTCACTTAGGACTTGAATAATTTTTTTTCTTTTGGTAAAATTATTGTTAGGAGAGAGAA TGAGCGCGGAGGAAGGGAGATTAAGATATCTTTCCTGGAGAAAGATACAAGCTTAGGCACAGTAAATACAAGTTAGGATG TGAAAATGAATTGCATAAGAGAGTTCTTCGGTATCTCTGCATTTTAACCCAAAGCCCCTGCAAGAAGCCATGGGATGAAT CCACAAAAAACTTTGGACTCAATCTTATCAATTGTTGCAAGGAAGATTCCATGATAAATATTCTCTGTTTGAAGTCTCAG CATTTGGTGCTTAAGGTGTAGGCACCTGAGAACATATAGTCCATTGCCAGAACTTTTTGCTCCCTTTGCTTTTCCCAAAG CTTTTTAACCTAATTAAAAGTATAAGCTCCAAGTTTTGAGGGCATGCTCAAACTTGTAGGAAGAACTATCTAACTGCTAG ACAATTTAGGAATACCAGTTGAACTTATTCTTAGTTAGAGCATCGTATCACTTATCTATAGATGAAGCTTCGTAAGGTCT ACAGTCTACAATATATCATTAGTCTTAACCCTATTGACCAAATGAATCACTTGACTTTAGTGGAAGGGGACTTTAGGTTT CTAAAAGGTTTTCTGGTATTGATTGGTAAGAAAATGTTCCTGGAAGCAAAGGCTAAATCCCATGGGTAGAAAGTGGCTAA GATGATAATAAAAAGTTACTCTTCAAAATTGTTTGGAGTATTTGTGCTTTTTTGTACTCTACTAAATATATTAAAAACAC TTATCTTCAAATTCGGGCTAGGCCTAACTCCATCCCAAAAGTTAGCTTAGAAGCGAGGATTGCTCTACCCTTTATAAGGA ATTTCACGACTGATACAAGTTTATTGAAGATGCTATCAGCGGGATGATGTGTATATTTATTCAGAGTCTTGATGTTTTAT TAGTAATCTAAACATATTCTCAGAGAATTCCTTAACCATTTGTACTTTTTGGGTTAAATCAAGTTTGGAAGATCCCTTAC AAGTTTGTTCTTACAGGTATGATGATCCAGACAGTGGTTCATCCTCTTTCTCAATACTACTTGGAAATGCTCCTCATCTT GATGGCACGGTAGGGTAATTATAACTACCAAACATCATTGCAAAAGATTCACTCAAATATCTTGTGATGTTTACAATTCA TATGGCGATTTAAGCCCTTTTCAGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGATACATTGGCAAAGCTTGAGCA ACTACCTACCCGCAAGGAGGGTATATTTGTAATGGTATACTTGAAAATCTTATCCATCTCATGCATTGATCTTTTTTTCC TTCATTTAATGAACAATCATAGAGCAAATAGATAAGTTTACATTTCTTGGAAGTTTATAGATTTTTCGTTGCAATTATTA TTTCATTTTATACTTTGAGAAGCCAAAGTGAAGTTGGAGAGACTTGAAGGAGAAGTGAAAAGGAGGGAGGATGGTTGGGA GATCCTAGAATGTTGAGTGCAGAAATATATATAATCTGTATTGTTTTACTGTGTAGGAATATTTTTTTCTATAATCTGTA TATTAATATGTAGCTTAAGATTATTCACCTGCAAGTTTTTAGCTTGAGGGAGGTTTTGTACAATGGATTACTTCATAATA GTAATACTATGTTCAAATGACAACGATTTTGTTATAATTTTTGAAGGGTGAGGTGAATAACTGTAAATTGGTATATCTAA TATTTCTCATGCTTATCAGGTTCTGTGAATTTTGAAGTGAGTATTCTGAATGTTTTGCAACTTAATAATTTCTTGACTTT TAGCTATTCCACAATGATTTAAGAACATTTTTGTTTTCTAAAATTTATTTACCACCTTCAGTCCCTTTCTCTTTTTTTTG AATAAGCTATGAATATGTATTAAAATCTAGCACAAGGGGTGCTAGAGCCCAATACAAAGGAGGAGGAAAAGTTACAAACA AAAGAGGGAAAAAACATAGCAAATATAAATGTAGCAGTAAACAACAGATCATCCAGTTTCAAAGTCAAAGACATGACCCA GCAACCTACAGTCCAAGCACATCAGACCTGCGAAATGCATACCCTGGGATTCATTACCCATTCAAAATGGGAGCAGCAAA ACTCCTTTACCTTAGCCGAAATCCAAACCCAAGCCTTCCATTTAACTAAGTCCAAAACATTACTCCAGTCAGGCTCCAAA TTGCGAAAAACCAAATTGTTCCTCAAAACCCAAATGGTCCAAACCATAGCGCACCAAATTATCCTCTCAAGAGAAGCCAT AATTATCCTTGGTTTAAAATGTCATGCAAACATGTGATGTGGGTGGGGCTGGGAATCTTTACATCCTTTCCATGCTTGCA TAGTTTATGAACCCTCAAGTTTTTGGGGGAAAGGTCACTTGGTGAGCTATGGGAAATGAAGGGATTTGTAGGGTGAAGGG TCAGGGTTCAAATCTTGGCGAAGGAACTAATTTACTAACAATTGACAACTAACCTTTGCCTATAAAAAAATGAACCCTCA AGTTTTACTTATTTCTCACATTTTGAAGAGGACGTGGTGGGGCATCCTACCTGGGTTTCTGTAGTTGCTATCTAGGTCAT GGATTAATCAATTGGCTGAACTGTATCTTCGTACATCAGCGAGTTTTCTAATAGAATCAGTCTGTTCATACTACATACTG ATATTTTCTTTCAAGTTTTTGGTACTGAAATTTAATATCACTCAACATGATCACTCTATCCTCTACACTAAGATATTGTT GTTTTTCCCATTCCAGCCAAAGGAACGCATCACTATACTGTCATCATATTACTATGGTAAGAATCTATCAATTGTATGTC CTTTTTTTAAACAAAGTATTTAAATTATTATATTGTACGACTCCAGTAGATGTTGTTTCTTTTTTAAATGTCCAGTAGAT GTTGTTAATTTCCTTTGTTTTTCTTTAGGTTAAAATGTTAGTCTCTAATTGCTATTACTTCACTTGATTTGGATTTTTGT ACCTATAGTTTTTGTTTCTTAATATCAGGACATATACTTATTTGGATTCTGGTCCCTAGGGGACCGGTCTCTTGAAATAT GGACCTATTAGGACCAAACCTTTTAGTCTGTTACCTTAATAAATATATAGGGATTAGAATGTGAAGGTCAGGACCAAAAT CCAACAATATCCACAAAAGTTGTTTAATTGTAAAGTGGACTGGAATTACAGGGATTGATTTTTTCATGTAACTTCACATT CAATATCAAATATTATATCGTGAATAATTTGCATATGAAGGTGCCCATACTTAATAAAAAACTGTTAAACTCCTGGATAT TTGAGAGATGCAGATCTCTCCCAAGTGCCAAATTACAAATGATCCTCCAACATGATAATCCCTCTTAAATCTCAACTCTC TTATTTATAATATTCCCTCCCCTACAGCCTAACCAACTCTCTCAATTAACTAAGCTACTAACACCCTAACTCACTCAACT GTTTAACTAAACTACTTACAAACTAGGGGTACCTATGATGAAGGTTCACAGCATAAGCCCTTGGTTACTAAGTTCTATGT TAGGAGGAATAAGAAGAGTAAGACTTAGAAGGCTATTTCTAAGTCATAAATAGAATAAGAGAAATGAACTCTGTTAGTTA CTTCTAATACAAGCTGTTGACAGTTGTAATTGCTGATGTCATGTTATTCTGTTATTGTTAGTTCTATGATTTGTATAAAT AGGGAACTGCTCATTCTGTTAGAGGAGTTATTGACTTGGTGGTTGTTAGGGAGATTCTGGATCTCGAATTCCAGTGGTTA GGGTTCTTGTTAGTGTTCTTGATTCCATTGTTGTAATTCCTGAGAATTCGACCTCAGTTCTAGAGGGTTGAGTCTCTGTT TTCTTCAATAAACTAGTAGTATTTCTGTGAGTTCATCAACCTATCAGAGGATGCACGCAGAGGTGGAAGACGGCAGCCCA AGGTGCAGCATTAAAGTGAGGGAGAGGGCGATAGGCTTCTTGGGTTATCTGTTTTAGGGCAATACTTCAAACATATAGGT GAAATAGGGAGAAAATTGCCCTAACTTAAACAAAACACTGTCAATTTTGGCCCCATTTTAGGGCACTTTTGGTTTCAAAA TAAACTTGCTAACGATGTTATAAAATCACGGGTCACTCTGAGTTTAACCTATATCTGTGTCCGATGAGTGACGACAATGG TCCAACCTATTTTTGTTTGCCGTTTAGCTTTTCTGTTAAAAACTTCTAATAGCTGTGTGTTGGATTCTCCTTCCTCTCTT GAGCTTTGCTCCTTTTTTGCTGTTAGACACAGAGACAGAAAATTGTGAGGTAGACAGATCAATTTTGAAGCGTAGGCTAG CTGCATCAGCTGTTGAAGTTGAAAGACAGGTATTAAATTGTACCAGATTCAAGACATCAATACCAAAATGTCTATTTTAC TGGTTAACATAGCTTTCATGTGTCACTTTGCAGAGAATGAAATGCTTCCCCTGA
CDS sequence (LotjaGi2g1v0306300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGAGAAGATCTTTGTTAATTATGTTCTGGGTATGAGTGAAAATTGGAATCAAGTAGCTCAGTCAGTGGAAAATTC AATCTTGTTTAGGAAGTTCTTGTCTTTTTTAATGCAGACAAATTATGGGGATATTGAATTCGGTTTCTTTCCAACTGTTG CTCCCAAAACTGTTAACCACATTTTCAAGCTTGTGAGACTTGGAGGCTATAACACTAATCATTTCTTTCGGGTGGATAAG GGATTTGTAGCCCAAGTAGCAGATGTTGCGAATGGGAGATCGGCTCCCATGAACGAGGAACAAAGAAGAGAAGCTGAAAA AACTGTTGTTGGTGAATTCAGCCAAGTCAAACATGTTCGGGGTATTCTTTCTATGGGAAGGTATGATGATCCAGACAGTG GTTCATCCTCTTTCTCAATACTACTTGGAAATGCTCCTCATCTTGATGGCACGTATGCAATATTTGGAAGAGTTACTAAA GGTGATGATACATTGGCAAAGCTTGAGCAACTACCTACCCGCAAGGAGGGTATATTTGTAATGCCAAAGGAACGCATCAC TATACTGTCATCATATTACTATGACACAGAGACAGAAAATTGTGAGGTAGACAGATCAATTTTGAAGCGTAGGCTAGCTG CATCAGCTGTTGAAGTTGAAAGACAGCTTTCATGTGTCACTTTGCAGAGAATGAAATGCTTCCCCTGA
Protein sequence (LotjaGi2g1v0306300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIEKIFVNYVLGMSENWNQVAQSVENSILFRKFLSFLMQTNYGDIEFGFFPTVAPKTVNHIFKLVRLGGYNTNHFFRVDK GFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSQVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGRVTK GDDTLAKLEQLPTRKEGIFVMPKERITILSSYYYDTETENCEVDRSILKRRLAASAVEVERQLSCVTLQRMKCFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 32 | 193 | 162 | 16.926 | ||
| Gene3D | 34 | 193 | 160 | 7.7E-35 | ||
| PANTHER | 35 | 223 | 189 | 6.4E-116 | – | |
| SUPERFAMILY | 36 | 196 | 161 | 4.68E-36 | ||
| Pfam | 37 | 190 | 154 | 1.2E-34 | ||
| CDD | 38 | 190 | 153 | 4.37156E-44 | – | |
| PRINTS | 49 | 64 | 16 | 5.8E-7 | ||
| PRINTS | 75 | 87 | 13 | 5.8E-7 | ||
| PRINTS | 121 | 136 | 16 | 5.8E-7 | ||
| PRINTS | 150 | 165 | 16 | 5.8E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi2g1v0306300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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