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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0306900 |
| Transcript ID | LotjaGi2g1v0306900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-galactose transporter, putative; TAIR: AT1G14360.1 UDP-galactose transporter 3; Swiss-Prot: sp|Q9M9S6|UTR3_ARATH UDP-galactose/UDP-glucose transporter 3; TrEMBL-Plants: tr|K4BWP1|K4BWP1_SOLLC Uncharacterized protein; Found in the gene: LotjaGi2g1v0306900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78062808..78065857) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGCTCACGGCGGCGGTCTCCGCCGCGTCCTGGTGCTCGCCTTCTGCGTCGCCGGAATTTGGTCGGCGTACATCTA CCAAGGCGTTCTTCAGGAAACCCTGTAAGATTTGATCTCTCCGATTCTCATCTCCTGAATCCAAAATCTCGATGAAATTT TCCAAATGCAGCTTCTGAGTTTCGTGTTTTTCTCTTTCCCTTGATTTGGTCACAGGTCGACGAAGCGATTCGGTCCAGAC GGTGAGAGATTCGAGCACCTTGCGTTTCTGAACTTGGCGCAGAACGTGGTGTGCTTAATCTGGTCATATATAAGTGAGAT TCTGTACCAATTGTTTGTTCCTACGTGCAGTTACTGATTTTCTTTACTGATTTTTGCTTATTTTGTTGGGATTGGTATGA ATGCAGTGTTAAAAATGTGGTCTAATGGAAATTCTGGTGGTGCTCCTTGGTGGTCTTACTGGAGTGCTGGTATTACCAAC ACCATTGGTCCTGCTATGGGAATTGAAGCATTGAAGTATATTAGCTACCCTGCTCAAGTATGATTTGTTCCATTCCTTTT ATTCTTGCTCCTTTTTTGAGAAATTGTATTTGAATATTAATTTGGTCAAGGGAAATTTGAGTTACAACTTACAAGTTAGG AAAAAGTATGACTTGATTTGGTATTCTATGCATGAATTCACCTACACTTTCTTGAAAACCAATGAAATGTTGTATGAGAT TAAAATTAAAACAAAAAGATGATAGATAAGAAGAAATGTAGAAGCTAGCCACATATCATACTTACAAATTGAAACAAGTT TTTTCATTGTCCTGCACGCCGCAGCATTTGCTGTGAATTATTGTTCAAATGTCTCGGCTTAGGAGTATGTAGTTTTTAAA GGGTTGTTGTTTACTACTTGTAGGTGCTGGCTAAGTCATCGAAAATGATTCCAGGTCAGTAGAATGTGCTTGATGCCCAA AAAGCTTGTGTTTTAGTTAGAAGCTATAGAGAATTAGCTGAGGTTTTATGGTATTTACGTTCTAGAGTCTTGCATTTGTG ATTGAATTGTAGTTATATTTTGTTCTTATGATCTTCAATACTAAGGGGAATAGAATGTTAAGGGTAACTTGTGCATGAAT TCCTCTTCCTTAAGTTTGATGACCTAACTTGGCAATATTTAGTATTTGACCAAAATAGTGGATAGTCTTAAATTTATGTA TTCTTTGAGACTTTTGTATTTCTTGTACTTGTGCTTGAATGTTATACACTATACTGCTTTTGACCTAATAACTCATCTTG ATTTGTATTTTACTTGGCTGCACCCTTTCCTTCATTTTTACATGAGGGTAGGCTGATAATAATTTCATTCATCTCTGTTA ACCATCTTTTTGGTGCGTTAAATGGAGGAGCTTCTGGCTGGCTCTGATATACAAGCATTTTGTAGAAAAAATGATGATAG AAAAATTTATAATTTTTTTGTTAACTTCATCGTCAGGTTATGAAAAGAACTCTTAAAATGCCTAACATACTATTCATTTT ACTTCAATGCAGTTATGTTGATGGGTACCTTAGTATATGGTATAAGATACACTTTGCCAGAATACCTTTGCACTTTCCTT GTTGCTGGAGGGGTATCAACATTTGCCCTTCTTAAGGTTAGAAACTAACTTCTCAGAATAACAGTGCTCCCCTGTCTTGT TTAGGAATTTCAAAGGTCTGTGAATGCAGCTTAGTTTTACTTGTTTATGCCAATTACAGACTAGCTCTAAGACTATGAGC AAGCTGGCACGTCCCAATGCTCCCCTTGGATATGGGCTATGTTTCTTGAACCTTGCTTTTGATGGGTTTACTAATGCAAC TCAGGATTCCTTGAAAGCAAGGTAACAGAATAGAATTATTTTTTTTACATGTAGCAAGTCTAGTTTGTCTGGAGTGCTTA ATTGATTTCTTCTTATTTCACCCCTTCATATATCCTCCCTGTTCATTCTTTTTCTTCTTCTTTTTATTTCCTTGTTTTTT TGAATTATACCGTTTCTCTCATGTGTGGCATGACTGATAGGAAATAATATTTTTCCTGGAAGTTGTAATCTATGAGAAAT AGAAATCATGAGCTCCTAGTGAGAGTTTTTTTACTAGACAGCTTCTGTAATCGTTTCTCTTTTGCTAAGGCAGATGCTTA TAGGTCATCTACGAAGTATGTACTGCTGACGGCTGAGTTTTGTTAATGAACTCTTTTAGATTCATGTATTGGATATAAGT TAATAATGGTAGCTGAAGTAGTAAACCATAATGGATTGACTTACAATCTGAGGCTTTCTTAATTAGCTTAGTGGCTGAAA ATTTTGGTCCTTAGTCTTGGGTGGATAACTTGATAGCAAAGTGATAAACAAAACTAAGTATGATTTATCATGTTTCACTG TCCTATGTGATGTTGCTTGTAGGAAAAATTTCATTGGTGTTGCCTTTCACATGTCAAAATGTATTAGCTTTCATTTCATG GGTGTTTAAGTGTTGACTTCTTTAGTCTCAGACATTGTTAGGCTTTCATAGTGGCTAATGATTCTTTAAGGCTCTCTTAG TGGTTGATGATTTTTTTTTAACATCTTAAATAAAGATTGACTGATCTTAATTTCTATAAACTATGGGTTTATCTTACTCA GGTACCCAAAAACAAGTGCTTGGGATATAATGTTGGGCATGAATTTATGGGGAACCGTATACAATATGATTTACATGTTT GGATGGCCCAGTGGCAGTGGATATGAGGCAGTTCGCTTTTGCCAACAGCATCCAGAGGCAGCATGGGATATCTTTCTGTA TTGCTGCTGTGGTGCAGTAGGCCAGAATTTCATCTTCTTGACTATTAGCCGGTTTGGCTCTTTAGCTAATACTACCATCA CTACCACTCGCAAATTTGTTAGCATTGTCGTGTCATCACTATTGAGCGGGAATCCCCTCTCAACAAAGCAATGGGTGTGT GTTTCTATGGTATTCTCTGGATTGTCATACCAGATCTACCTCAAGTGGCAGAAGTTGCAGAGATTGCAGAAGAAGAGAAA AGCCATGTAG
CDS sequence (LotjaGi2g1v0306900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCTCACGGCGGCGGTCTCCGCCGCGTCCTGGTGCTCGCCTTCTGCGTCGCCGGAATTTGGTCGGCGTACATCTA CCAAGGCGTTCTTCAGGAAACCCTGTCGACGAAGCGATTCGGTCCAGACGGTGAGAGATTCGAGCACCTTGCGTTTCTGA ACTTGGCGCAGAACGTGGTGTGCTTAATCTGGTCATATATAATGTTAAAAATGTGGTCTAATGGAAATTCTGGTGGTGCT CCTTGGTGGTCTTACTGGAGTGCTGGTATTACCAACACCATTGGTCCTGCTATGGGAATTGAAGCATTGAAGTATATTAG CTACCCTGCTCAAGTGCTGGCTAAGTCATCGAAAATGATTCCAGGTCAGTAG
Protein sequence (LotjaGi2g1v0306900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAHGGGLRRVLVLAFCVAGIWSAYIYQGVLQETLSTKRFGPDGERFEHLAFLNLAQNVVCLIWSYIMLKMWSNGNSGGA PWWSYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPGQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 121 | 121 | 4.8E-77 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 121 | 121 | 4.8E-77 | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| Pfam | 15 | 121 | 107 | 2.1E-21 | ||
| Phobius | 31 | 49 | 19 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 50 | 69 | 20 | - | – | |
| Phobius | 70 | 123 | 54 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0306900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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