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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0307200 |
| Transcript ID | LotjaGi2g1v0307200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT1G14380.7 IQ-domain 28; Swiss-Prot: sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31; TrEMBL-Plants: tr|I1J5M2|I1J5M2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0307200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78156090..78162709) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAACCTCGTAGAAGAGAATCTATGACGTTACTTTTCAGTTTTTAGCCATACTCTCTTTCTCTCTCTCAGATGCTCTT TATCTTCATTTCACATGCTCTTGTCGCTCTTCACTCACTCACTCACTCACTCACTCACTCTATTATACTACTGCAAATCA CTGCAACCAAAACCGGAAACTTTCTTCTTCATTCTCACCCTTCCCTCTACCCCCAATCCACATTTCTTCAGCATTGGACG ATTAGGGTTCCTACTTTCTCTTTTTTCTTCTTCTGTAATTACTGGCATGAATCTGTTGTATTCTGTGTTTTCTTCACTGG GTTTTGTTTTTTTTTTTATTAGGTTTGGTTTTTGTTAAATATTAATGTGTTATTTAAGGAAGGTGTGTGAAGTTGACTCA TGTTTGGTGCTGTTTAGAATTAATTGCAATTCTAGGGCTTCCTTTTGACTTCTAGTTTTTGTTCTTGTTCTTGTCTGTCC CTATTGGAAATTAGGTAGTGAGTAGTGGGGTATGGTTTTGGTTTTGGAGTCTTCAACTCTTTTATGGTATTTTTCTCCGC ATGACTTGCCCACATGTCCATTATCTTACTTGAGAATGAATGAATATTTGTTGGGCTGTTACTTTATGGGGTTTCTTAAA TTAAGTTTTATGTTTGCTTGTTTAATCTTGTTTAACATCTAATTAGCTTGTAATTGAGGGTCAATTGTATATGTTTTTTT TTGCAGATTTTGATGCTTGAGTTTTGTGCTTTGTAAAACATTGATCTTTGCTGTTATGGGGAAAGGACGAAGTCCTGGGA AATGGTTCAAGAACTTACTCTTGGGGAAGAAGAAATCATCATCCAAGTCTAATTCATCAAAGAATGATGATATTTTTGTA AGTTTTTTCATGTTTGATACCCATTTGTGTTAATGATTTGTTAGGGAAGGCAGAGAAAATGTCAATATTGTTGCCTTTAG GTTGTGAGTACTTAGACAAGTTGTAACTTTTGTTTTAATTTATTTATGTACAAAGAAACCTTCAAGTAACAAGGATGTGC TGGGGTCTTCTGAGGTGTCCGTGTCGGCTCAAACTGTGGATTCTTTGATCATATCCGCACCTCTATCTGGAACTAATGCT ACTCAAGGAGTGGTTTCAGAAAAGGAAGTAGTTAGCAGGCCATCGAATGACAGGGATGTTCTTTCAAATGGAGATAAAGA GGCTCATGCTCAGCCTATTGCTAATGTGGAAACTAAAGAGGATCTCGAGAAACTCCAGCTTACAGAAGCAGCTATAAAAC TTCAGGCTGCCTGTAGAGGCTATCAGGTAATTACTCCCTGATACAATTCTGCTATACCAGCTGATATAACTTGGTTATAA TTATTTGGAAGACATCATTGGCATTCGATATATCAATGCACTGGAAATGTTAATAGATACCGATGTGTTATACAACCACA GTTATCTTACTTTCAATGTTTTAAATATTCAGTAATAGAATAGAATGACAATGTGGGCATTTCGTTTACTGTTATAGCTT TAATCTGTCCAGTTTATGCATTTTTGTTTGAAATCATACTGTATCATTATTTATTTGATCAAGAATTGCTGTACCCATTG ATTCTCAGTGTGTAAGCTATCACATGCAAACTTCCTAAGCATTGGTTATTTATGAGGAAGTTTCTCTATATATAATTAAT AAACGCTTAAAGTGATTCTTGCTGTTTTTCATTGAAGGCTCGTCGAGCATTTCAAACACTCAGAGCTATCACACAACTGC AAGCTCTTATCCGTGGCCACCTGGTTAGAAGGCAAGCTGTTTCTGCATTATATTGTGTGAAAGGAATTGTTAAATTTCAA GCATTGGCTCGCGGTTACAATGTTAGGCGTTCTGATTTTGGGCTTGCAGTCCTGAAAATTCGAAAGGTAAAAGTTATTTG ATTAATTCAGCCAGTACAATGATCTGGGCATTATTCTTCCTGACCTTCTAGGCGGAAATGTGGAGGTTTCTTATTTAGTC AGTATTAAAAGGGGTTTTCTATCATTCATTTGGCCTCTTCTAGTGATTTGTAGAACATATTCCATGGCGTGGATGAAAAG ATGAATGTCATCAATTCCATGCTCCCTGCCCTTCATTTGCTTCACTAACCGTTGCTTCAACTTTTTTTTGCCAGGATACT CAATGTTCAAATTCCACTGGGCTAGTTACATCTACACAAGCAGAGAAGCTGTCAGACAGTGTCTTTATCCAGAAGGTAGG TACTTTTAATTAATGTTCATAGATTTAGTTTCTTTTAGGTACTTCTGAAATATGACTTATTTAAATTAAAACTCCAAGAT ATTATTATCCGTTGGTAATTTTACTTTCCATGGAAGGGTTCTTCCCCCCTATTTTGTGAGCTTGAGGATAGGTGCATTTG GAAGAGCTTATTTAAACTTATCTTATAGCATAAGCTCGTAAGCAGGTGCTTGGTTAAGTTTTGGAATTAGCTTATGACCT ACCTACAAACTATTTTGATAAGCTTCTCAAATTAGCTTATGAAAAAACGTTTATACCTACCTATAAACTCCTTAAAACTT GTGTCAATATGCTTCCCTCACAAACTTATGAATAAGTGCTTATTTGATAACTATAACCGCTTAATTAAGCTATTTTCCCA GTCTCAAAATCTTCTTGACTATTGAATTTTGGACTCCTGAAATCCTCTCACATTATATGTCTTCAACTTGCTTTTGTTAT ATTTCTATGTTCATGATCTTGATCTACACCACAATTTATATTCACTGTATGTTTCAATTGACGTTTCTCCATCATGTAGT ATCCAATTTATTCTTGAACTGCCTGCATTGTGGAGAATGACGTTAATGTGTACCAATTGTTCCAGTAATTGTTAGTGTTG AGTGACAAATTATTTTGGTCCTGAACCAATGAACCTCGTATTGTGAGTGTTGATTGTAAGTTGATAAGGCTTAGCCTTGT TTTGCTCATTTAGCCTTCTACTCATGATTTATTAAGATGAATGTTATAACAGTGGTTGCAAAAAACTGGTGTTTTTTCTT TTATTGTTTCTTTTTTGTTCCTTTTGTTTTGAAACTAAGTTATCTCATTAAATGTGTTATCCATTTCAGCTTTTGGCTTC ATCTTCCAATGTACTTCCTCTATCCCTCAATGGTGATCTTGGAGAACCTAACTTGGCTTGGAAGTGGCTTGACCGCTGGA CAAGGTCACACTTTTGGAAACCTCTTCCTAAGTTAGAGAAGAAACTTGACTCAGTGTCTAAAGAAAAAAATAGAAGTGGT CAAACAGTTGAGAAGGGACAAGTTAAAAGAAATACCCGGAAATCTCCTGCTGCGAAAGCTGAAGATAGCTCAATTTCAGG TTCTAACAAATTTAAACAGCGTCCAAAGAAGGATGCAATTGCAAACCACTCGGTGCCTCCATCTCAGGAACAACCACATA AGGAAATTGATAAAACTAGTCTTAAGAAATCTCGCATGCAAAATGGTTCGGACAGGCCTGAGGCTGTTAATGAGAAAAGA AAACAGACCACCACTAGGAAAATTTCAGATCATATTGTTACTGATCTTTCAGAGCAGGGTCCAAATGCCTCTTCAGAGAA AGTGAAAGATTCGACAGCGCCAAAGTCAAAAGAGTCTGGGTCTGACAAAAGTCTTGAACAGCAAGCAAAAGAAGAGAATA ATAATGAACCACTTAAGGCTCCTATTACTGTCTTGCAGACTAGTGTGCAGAATGGCGGAGATGATAAAATTCAAGGAGTT AATGAAGACTTGAATGATGGTGACAAAATTATCAGCAACAATTACCAAAGAAGGGCCTCATTACCTGCCAATTTTAATGA TAAGGATAATGAGTTGCATAACACTCCAAGACTGCCCAGTTATATGGCTCCTACTGAATCTGCTAAAGCTAGGCTAAGAG GACAAGGCTCCCCAAGATTTGCTACTGATTTGGCTGACAAAAATAGTATGACCAGGCGGCATTCACTTTCATCTTCCTTT AATAGTAAGTCAGGTTCATTTTCCCCAAGAGCAGAACTAATTTCCATGGGCGGAAGAGGGGTGATAAGGACTGATAGATC TCTGTCTTCTTCAAGGGACGGAACTGGTAAGCATTATGGATTTTTGACCTTTTTCATTGTTTGATTGGTTAAAGGTCTGG CGTGCATAGACACCAGTATCAATTGACATGCTCATGTGTATTATGGTTAGGAAAATTTTGCTGTTCTGATGAATGATTTT TTCTAGTTTACTACTAGACCTCGCTAGACTACTAACGTCACATGCTTGAAAAGAATAATGTATTTGCTTTTATTAAAAAA TGTTTGTCCTCCACAAAATTTAATTTGAAAAGAATAATGTATTTGCTTTTATTAAAAAAATGTTTCCCTCCACAAAAGTT AATTGTGTTTTGTATATTTATAATGAATGTGCTGTACATATTGCTTTCTTACTCTATGCTTGATTGCCAATCTCTTCTAA GTCTCTTTGGAATGATGTTGATTAATTTCAACCGTGTATTAAATTGCTAAAGTAATAAAGGATAAAATAAAGTACCGTAT AATAAATCATGTTTTGGCCTTCTTAATGTTTTGGCCCTATAGGAAAACTATTCACCTGACCCCTGTACCTTATTAGAACT TCTACTGGTCTTACATGCCCAAGCAACATAAGGCAATATTCTATCATCTTTTCTACAATAGTTGCTACCCCAACTCAGCT TTAATAAATTTATTGTTAATCCAATCTTATCTTGTGTGCGCACATATCCACGACAACACTCTCATCTTTTTAGCATTAAT TTTACTTCTTGTTGGTTGTTTGCTGCCCAATATTCGATCTGGTAAAACATCACTTCACTTGTCTTATAACTATGGTAATA TTTTTTTTCTTAGCTTGATTGATACTTCTATCACAAATAACACTTGAACAACCCATCTATCTTCCTTGAATCCTGTGGAT CACATCTTTCTTCATTTTCTCATCGTTTTGTATACTGGACCTAACTAACCCATGATACTTAAACCGTCTGACTTGTGATT TTGTATGGTTTCTAATTTTTAACTCTTAGCTATAGCCAGTGTTTCTCCTTTGCACTTCAGTTTACTTCAACTTGAAAGAA AAATTACATGCTTCCAAAGTTTGTCTAAGACCCTAGCTTATTATTTTTTTCTTCTCTCAACTGTGCATTTAGGACTATAT CACCCGCAAAAGGCGTGCCTTGTGGCACTTACTCTTGGATATGTTTTTTATGCGCATCCAATACCAAGTAAAAATGATAA GGGCTTAAAGTTGACTGTGGTGCAGTCCTAGTGCCTGAAATAGGCTTCAATGTCCTTGTGAAAGCTGTAAGAATATGTCT AAGGTCGTTTGGTCTTGTGTGGAGAAAACTCCTAAAAGCACAAGGAGAATTGATAAAATGGAAGATAGTCAATTGTTAGA GGTAGCGGAAGACCAAGGAAAAGTTTAGGCCAAATTAAGAGAGATGTAGAGTTAAATGGTCTATCTTTGAACTTATTTCA TGAAATACATTATGGTGTCACCTGATCCATGTAGCCAATCCCACATAGTGGTAAAAGGGCTTCGTTGCTATCTACAGACA CCAGATTTGTGTAATATGAGGTTTGTAGCAAAAGTTTCCACTGAAACAGTTAGTGCAGCAAGGTCTGGGGGTTTCTTCAC CAGAATTTTGGTAACTTAAATTTTCGTAAAAGACTATAATGTTCTAGAAAACACAATAATTCTGTATGCATAAATAAAGA ATTCTTTTAAAATTAGCAATAAGTGTCATGGTCTTCATCAAAAGGAATTCTATTATGCATGATTAATCAAGCATAAGACA TGTGGATTTTATACACATCAAATATTAGTGTCCTCTGTTATTTGCGCTTTACTGTTTCCATTACTCACTGTGTTCTATGT ATACTATCAATTTCAGACAAGATGATGCAGCCTCAGTGGAGAAGGTGATTTTATGCAATCTTTACTTCAAGGAGGTAAAG ACGAATAGAGTAAAAAGTATGCTTGGATGACATTGCAGGCTTTCTTTACTCACCATTATATCTTATTTGTGGTCGTAGAT ACAAAAGAGGGATATATATTTTGATCAAGAGTCTTGTATTGACTTTCTTTTAGTAAAGGAGTATTTTTTGTGGGTATATA TTTACAGATCTAAACTGATGTACTGGTTTTTCACTTTTTCTAGCAACTGATGTATTGTTCAAACTTCAAACAATTGTTTC AAGAAAGCTTAACTTTATTCAGTATCAATGTACGAGTTCTTTTGCGATGGAATGTAAGTATGTAACATTCTGTCACCAGA AGTAAAGTCTTGATATGGAGTGAGACCAAGCTCATCTCAGCAGAGTTTGCTTCTACACCCGGAGAGCAGTGCAATTCTTA CGAGCACTCGAAAGAACATAGACTTAATTGAAGTTTTAGTCCTTCATCTATTGCGATTATGCAATTTGGATCTCTCATGT TTAATAGGAGTGACATTGTTCCTTGAATTTTATGACGTGCGAAAATCAAACCCTTCTATTAGCCGGACGTCCAAAATCTA ATGGAGTGTGCTTATGTGGCCTTCATTGGATGCCACTTAAGCATTGACAAAAATATAAAT
CDS sequence (LotjaGi2g1v0307200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAAGGACGAAGTCCTGGGAAATGGTTCAAGAACTTACTCTTGGGGAAGAAGAAATCATCATCCAAGTCTAATTC ATCAAAGAATGATGATATTTTTAAACCTTCAAGTAACAAGGATGTGCTGGGGTCTTCTGAGGTGTCCGTGTCGGCTCAAA CTGTGGATTCTTTGATCATATCCGCACCTCTATCTGGAACTAATGCTACTCAAGGAGTGGTTTCAGAAAAGGAAGTAGTT AGCAGGCCATCGAATGACAGGGATGTTCTTTCAAATGGAGATAAAGAGGCTCATGCTCAGCCTATTGCTAATGTGGAAAC TAAAGAGGATCTCGAGAAACTCCAGCTTACAGAAGCAGCTATAAAACTTCAGGCTGCCTGTAGAGGCTATCAGGCTCGTC GAGCATTTCAAACACTCAGAGCTATCACACAACTGCAAGCTCTTATCCGTGGCCACCTGGTTAGAAGGCAAGCTGTTTCT GCATTATATTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGCGGTTACAATGTTAGGCGTTCTGATTTTGGGCT TGCAGTCCTGAAAATTCGAAAGGATACTCAATGTTCAAATTCCACTGGGCTAGTTACATCTACACAAGCAGAGAAGCTGT CAGACAGTGTCTTTATCCAGAAGCTTTTGGCTTCATCTTCCAATGTACTTCCTCTATCCCTCAATGGTGATCTTGGAGAA CCTAACTTGGCTTGGAAGTGGCTTGACCGCTGGACAAGGTCACACTTTTGGAAACCTCTTCCTAAGTTAGAGAAGAAACT TGACTCAGTGTCTAAAGAAAAAAATAGAAGTGGTCAAACAGTTGAGAAGGGACAAGTTAAAAGAAATACCCGGAAATCTC CTGCTGCGAAAGCTGAAGATAGCTCAATTTCAGGTTCTAACAAATTTAAACAGCGTCCAAAGAAGGATGCAATTGCAAAC CACTCGGTGCCTCCATCTCAGGAACAACCACATAAGGAAATTGATAAAACTAGTCTTAAGAAATCTCGCATGCAAAATGG TTCGGACAGGCCTGAGGCTGTTAATGAGAAAAGAAAACAGACCACCACTAGGAAAATTTCAGATCATATTGTTACTGATC TTTCAGAGCAGGGTCCAAATGCCTCTTCAGAGAAAGTGAAAGATTCGACAGCGCCAAAGTCAAAAGAGTCTGGGTCTGAC AAAAGTCTTGAACAGCAAGCAAAAGAAGAGAATAATAATGAACCACTTAAGGCTCCTATTACTGTCTTGCAGACTAGTGT GCAGAATGGCGGAGATGATAAAATTCAAGGAGTTAATGAAGACTTGAATGATGGTGACAAAATTATCAGCAACAATTACC AAAGAAGGGCCTCATTACCTGCCAATTTTAATGATAAGGATAATGAGTTGCATAACACTCCAAGACTGCCCAGTTATATG GCTCCTACTGAATCTGCTAAAGCTAGGCTAAGAGGACAAGGCTCCCCAAGATTTGCTACTGATTTGGCTGACAAAAATAG TATGACCAGGCGGCATTCACTTTCATCTTCCTTTAATAGTAAGTCAGGTTCATTTTCCCCAAGAGCAGAACTAATTTCCA TGGGCGGAAGAGGGGTGATAAGGACTGATAGATCTCTGTCTTCTTCAAGGGACGGAACTGACAAGATGATGCAGCCTCAG TGGAGAAGGTGA
Protein sequence (LotjaGi2g1v0307200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKGRSPGKWFKNLLLGKKKSSSKSNSSKNDDIFKPSSNKDVLGSSEVSVSAQTVDSLIISAPLSGTNATQGVVSEKEVV SRPSNDRDVLSNGDKEAHAQPIANVETKEDLEKLQLTEAAIKLQAACRGYQARRAFQTLRAITQLQALIRGHLVRRQAVS ALYCVKGIVKFQALARGYNVRRSDFGLAVLKIRKDTQCSNSTGLVTSTQAEKLSDSVFIQKLLASSSNVLPLSLNGDLGE PNLAWKWLDRWTRSHFWKPLPKLEKKLDSVSKEKNRSGQTVEKGQVKRNTRKSPAAKAEDSSISGSNKFKQRPKKDAIAN HSVPPSQEQPHKEIDKTSLKKSRMQNGSDRPEAVNEKRKQTTTRKISDHIVTDLSEQGPNASSEKVKDSTAPKSKESGSD KSLEQQAKEENNNEPLKAPITVLQTSVQNGGDDKIQGVNEDLNDGDKIISNNYQRRASLPANFNDKDNELHNTPRLPSYM APTESAKARLRGQGSPRFATDLADKNSMTRRHSLSSSFNSKSGSFSPRAELISMGGRGVIRTDRSLSSSRDGTDKMMQPQ WRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 403 | 403 | 9.6E-216 | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 1 | 403 | 403 | 9.6E-216 | – | |
| MobiDBLite | 18 | 46 | 29 | - | – | |
| MobiDBLite | 71 | 98 | 28 | - | – | |
| MobiDBLite | 80 | 94 | 15 | - | – | |
| SUPERFAMILY | 107 | 162 | 56 | 2.92E-5 | ||
| SMART | 115 | 137 | 23 | 4.3E-6 | ||
| Gene3D | 115 | 158 | 44 | 1.5E-8 | – | |
| ProSiteProfiles | 116 | 144 | 29 | 10.512 | ||
| Pfam | 117 | 137 | 21 | 1.9E-6 | ||
| SMART | 138 | 159 | 22 | 6.0 | ||
| ProSiteProfiles | 140 | 167 | 28 | 8.48 | ||
| Pfam | 140 | 157 | 18 | 0.0011 | ||
| Pfam | 166 | 182 | 17 | 0.071 | ||
| MobiDBLite | 268 | 295 | 28 | - | – | |
| MobiDBLite | 268 | 443 | 176 | - | – | |
| MobiDBLite | 328 | 371 | 44 | - | – | |
| MobiDBLite | 373 | 387 | 15 | - | – | |
| MobiDBLite | 388 | 411 | 24 | - | – | |
| PANTHER | 400 | 561 | 162 | 9.6E-216 | – | |
| PANTHER | 400 | 561 | 162 | 9.6E-216 | – | |
| MobiDBLite | 417 | 433 | 17 | - | – | |
| MobiDBLite | 460 | 563 | 104 | - | – | |
| Pfam | 465 | 530 | 66 | 2.2E-16 | ||
| MobiDBLite | 509 | 527 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0307200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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