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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0308900 |
| Transcript ID | LotjaGi2g1v0308900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.2; TAIR: AT1G69850.1 nitrate transporter 1:2; Swiss-Prot: sp|Q8H157|PTR19_ARATH Protein NRT1/ PTR FAMILY 4.6; TrEMBL-Plants: tr|A0A0B2P0D0|A0A0B2P0D0_GLYSO Nitrate transporter 1.2; Found in the gene: LotjaGi2g1v0308900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78307560..78314302) extracted from Lotus japonicus Gifu genome v1.2.
CCGAACAAGATACCATGTCTTAAATGTGAAGAGAAAAAAAGTCAATGTGATGGTTCATGAATGGCGTTGTATCTTGTGAT GACCATTCTGCCCAAGCAGGAGCCATCCTTGCTGTACCTGGATCCTCTTTAAATCTCTCACCACTCATCTTTCTTTTCTC CCTCAACCCCTTCTCAGAATCCAAAGCCAATAACATGGTGGGTTCTCTCTCTCTCTATCTCTCTCCTCTCCCCTTTTCTA TTGATTACTTTCACAAAGTACTATATAGCTAGTAACTAATATTTTCACTAATTATACAATTGTATCTATCTGCAGGAACT AGAAGCAGGCCAAGTTACCAGATGGGAAGGCTATGTTGATTGGAGGAGCAGGCCTGCTCTTAGAGGCAGCCATGGAGGCA TGCTTGCAGCCTCCTTCGTTCTGGGTATGTCCAATTACACATTAATTATTTGTTTCATATTATATCTAACTGTCATATAC TCATATATGATAATTCACTGATAAACCATTTTTAAAATAGTCCACTGATGATCCTGCCATGAAAATAAAAAAATTAATGA TTAATCTTCACACATATGAATATAATATTGATTTACATATCGTGAGAACATGTGTAGATGACATAGGTATGAATATGTGG ATCTGACTCTGAGGTTGGTTGTTTTAATTAATAATTTTGTTGTTTGTGTGCAGGTGTGGAGATTTTGGAAAATTTGGCGT TTTTGGCCAATGCCAGCAATTTGGTATTGTACTTGAAGCAGTACATGCACATGTCACCTTCGAAATCTGCCAATAATGTC ACTAATTTCATGGGAACCGCCTTCCTCCTTGCACTTCTTGGTGGTTTCTTATCCGATGCATTTTTCACTTCTTATCATGT CTACCTGATAAGTGCACTTATTGAGTTCCTGGTAAGTTCTCTCCATTAATTACCATCTCAATGAATGATCAGTTTCTGAA TTTCTCAAACTTTTCTAGTCTCTAATTTTAAGTTTTTATTACCAAGTGCCCATATTGTTTTTGTCCCTTTTCCCTTGCTA TAGGACTTGGTCTATAGGAAGGGTTGAAAGAGGTGTAGCGAAAGGAAAAGGGAGTTAAGTAATTTACTACTATAAGGTAG CTTAAAGGACAAGTGTCTTGCTATAGCATATAAAGATTTGGTTAATGCTCTGCATATATTCTCCCATTAAACAAGAAATC TAGCATATATATATCATCAATTATTAATTTTTAATTGTTGGAGTTAGATTTAAAAGAGTGAAATGCAGGATAATTTACTT AAACACCAAATACCACCTAAATATTTGGTCATCACCAGATATTTACCTAAACACTTAAGGTGTTAAGTTTATGAGTCAAT TTTTTGAATCTTTAACAATTTGGAACTTTATTCTGCACTTGAATTCTTAAAATTATTCTCCATTTTATTTTTTAAAAAAT AAGAAGTACGTTATCTAACTGTTGAGTTGTGAGAGGTGAGTGCTGAATCAGAATCACTAAAAATTGTTCGGATTTGACTT ATTAATCAGAATCAATTAAGAGTCAGTTGCAGATTTTTTCAACTTCTTGGGTAGGGTTGAATCAAAATGAAGCAACGTCA AAGGATTGGAAAAATGATGTTTAAAGTACTTTCACATACCGGGATTCCCCTTTCTTTTGCCGCATTATCCTCCCACTTGT TCTAACCAAATCTTGTGATGGAATCACATAATTAAGATAACGTTTTTATTCACTCTCTTTAGTTCTACTTTTTTAAAGGA ACTAGTAAATTATTTCAATTTTATTTTAAATTTTATACTTCTTTTTTATTTACTGTAAATGTAAATCATTATTCACTATT CACACGTTCTGTCCTATTTTGATCTACTACCAAATACTATTCATGTTAATGTTATGAGTCAACAGACCCAGTGCATTAAA TATAAATGATACTAACCATTTACATAGTTATATCTCCTCACATTTCTTCTAAAATATTGTTAAAATTCTATGATATGATA ATCTTTAACACGCTATCTTTCCTGAAGCGATGGAAGATATTATAGATTAGCTCAGGGGAGTAAAGTGATGCATGATATGA TATATACATAATTATATACTATTTCTTGTGATCAGCATCTACCCAACATCACTTAAATGGGAGGGGCACATAATATGGCT GTTAATGACTGTCGACTTTCTCCTTTTCGCTTAATGGAGTGGGGGAGATAAAATAATGTTGGTGGATGAAGATTTTGTCT TTTTCAGATAAGTTTCGGTGTCACATGAGTGAGAATAGACATCACAACCGTGATGGAAAAATTTAATAGATATTTCAAGT ATTAACGAGTATTTGTATTAAACATATTATAGTTTATGTTTGTTTTACTATTTCAGTTAAAAAATAATTATATTTTGCAG ATAAATATTTTTAATTTTATCATTATCCTAAGAAATCTATTACGAGCATCCTTAATTTATCAAATTCAAGGGGCCCACAT ATTATTTTTTATCAACGTATTTAATTTCCACAAGGGCCTAGAATCCGTTTATTTTAGTGCATTGTCTTCTGTCATTTTAT TAGTTCCTCAAATCTAGCCCCAACTAGGACCTGATCACTTTCTTAGCTATATTTCCCCCCCTTTCCTTGTCTCTTAAGTC TTAATTTAATTATAGTCAATCACAACCATAGCTTTTGATAATTTATCCATATAATTAAATTGTTTTTCTGACATTTCTTC TTCCAGTGATTATGTTTGAGAGGGAGAGGAGATAAATAAATAGGAGATAAGTCAACTAGTGATGTTATTGCTCAAAGAAA TTGATCCAAAATTTTCTTTATTCATTGGTTTATATATCTTGTCAAGTTTAGTTAAGTAGGCATAAGTTATGCCATCAACC CTTAGCATTGGGTGGTCCCTATAGTGATCATGTGGTGAAAGAACTTCTTATTGAACTTGTCTGAGTTTCATTCTAAAAAT GGGTTTATTTTATAAATCCATATATTCTAATATTCTAGAAGGTTAATTTCAAGAGCATAAATGGCAAGTTCCTATATAGT TTTGGGAAAAATTAAGTTCATGAACCACGTGTGTGGTTGTCATTTTGGTGATCCATCATCATCAATCATTACCACCCCTT GCAATCTACTAATAAGTACTATAATAACTTTGGCCAATATCTCAGTGACGTTTCATAAGTAACACTTAATAATGGTGGAT TATATAAGAAGTCCATATAACCCTGATGACACGTGGCCTTGGACCCTGATGCTGGTTTACACTTTTTCTATGTAGAACAA GTCGTTTATTATTGATTGGTCAAGATGTGAGGAATGGTAGCCACACTGTCTTATTATTATGTGTAATCCAACAAAAGCAT ATCTAGTTATCCACGGCCTAAATTTGTGATATTTTATTGGTTAGCTTTCATTTCTGACCAAAAACAGGGAGAAAAAGAAG GTTAAGTGTCACATGTGCAATCAATACAAATATCCACATGTATTGCCATCCACATATTGGTACCCACCACTTGATATTTT CATTGTAGTTTGTAGTTCTAAATCAAGGTTGGACCCATCTATAGGAACAAACTTTGGTATTGGTGGGTTGAATATTGGGC CCAGTTTAGGCCCGCTTTTTTACAAAGCCCTCTCACCTATGCAATCAATGAAATATCTGTGTGTGTTGCCATTCAACCAT TGGTGCCCTATTGACAAAAAAAAAACTATTGGTGCCTACCAATTAATTAGCTTCTTGCAATTTTTTATTAGACATAAGAT TTGATTGCACCGTATATTGGAATAAATTTGGGACTTAGTGGGTTTAGTCCTGGACCCAGTTAAGCCCTACTATATAGCCT TTTTTTAGAGTATTGTATGACCATTGACCAAAATATGTTTATGACTATTAGCCTCTAGAATTGAATGACTTCTTTGGAAA GTGGTTTTTTGGATTAAACACAGTAAATTTTACTGATTCATGTAGCTGGTTTTATCTAGCAGGAAAAAGGTGACATGACT AAGTAATTTGGATTATTTTTTTTATGCAGGGTTTGATTGTACTCACCATACAAGCTCGTTCACCTTCACTAAAGCCACCA CAATGTGATGAAGGCACCATATGTCAGGAAGTTAATGGTGGAAAAGCAGCAATGTTGTTTGCTGGCCTCTATCTGGTGGC TCTTGGAGTTGGAGGAATCAAAGGATCATTGCCAGCACATGGTGGTGAGCAGTTTGATGAAAGCACCCCAACTGGAAGAA AGCAGAGATCAACCTTCTTCAACTACTTTGTGTTCTGCCTATCATGTGGTGCCCTTATTGCTGTTACTCTTGTGGTGTGG GTTGAAGACAACAAAGGATGGGAATGGGGTTTTGCAATATCTACAATTACCATATTTGTATCCATCCCATTGTTCTTGGC AGGCTCTACTACTTACAGGAACAAGATCCCTTCAGGAAGCCCCCTCACAACCATTTCAAAGGTAACTTTATAAGCCCCCT GCATTTTCCATAGCTTATATCATGTTCGGAGCAACTTCTATTTCCTCATAATCAATTATGATACCCCATAAGTCGCTCAC TGAAGCTTCTCCCTATAATTGAATTTTGGCTTTAGAATCAATTGTAGAATGATTTTCAACATGCGCATAGTCATAAATAA CCTCCTATTTCCCATTCTATTTCCTATGATTTATCGCTCTTTGACTAATTTAGTATGATTTGTACTACCTCTTTTAAAAT TGAGCAGGTTCTTATTGCTGCTATACTGAATTGCTGCTGCACCAATAAAAACTCTAGCAATGCTGTTGTGAATATGGTGT CAAGCCCTTCTGATCCACACTCAGGTAGAAAAGAATCAGTGGAAGAAACTAACAAAGCAAGCACATCAGCTGAAACCCCA TCAGAGTCCCTCAAATTCCTTAATGGAGCAGCTGCAAACAAGCCAGTATTTTCGTCATTAGAATGCACTGTACAACAAGT TGAAGATGTCAAGATAGTATTGAAGGTACTGCCTGTATTTGCCTGCACCATTATGCTGAACTGTTGCTTGGCTCAGTTGT CCACATTCTCTGTTGAACAAGCTGCTACAATGAACACCAAATTGGGTTCCCTCAAGGTGCCACCGGCTTCTTTACCAGTT TTCCCAGTGCTCTTTATCATGATCCTAGCACCAATATATGACCATGTTATTATCCCTTATGCTCGGAGAACGACGAAATC AGAAATGGGCATCAGTCATCTCCAAAGGATTGGAATTGGATTAGTACTCTCTATAGTTGCCATGGCTGTGGCTGCTGTTG TTGAAGTGAAAAGGAAAAGGGTGGCCACTCACTCAGGCCTAGTTGATGATGCTACCAAACCACTACCTATCTCATTCCTT TGGATTGCTTTTCAGTACTTATTCCTTGGCTCTGCTGATCTTTTCACCTTGGCTGGGTTGTTGGAGTTTTTCTTCTCAGA AGCACCAATAAGGATGAGATCTTTGGCCACATCACTTTCATGGGCCTCTTTGGCAATCGGGTACTACCTAAGTTCAGCCA TTGTATCAATAGTAAACAGTGTCACTGGTAAAGGCTCCCACAAACCATGGCTATCTGGTGCCAACCTTAACCACTATCAC CTAGAGAGGTTCTATTGGCTCATGTGTTTGCTGAGTGGGTTGAACTTCCTACATTACCTGTATTGGGCGGCTAGGTATAA ATATAGAGGGAGAGGTACTGCTAATGAGTGAAGCAATTGTGGGAGTTTTTCAAACAGTCTATATGTGCACCTTAGTTTAA GGGTTCATTGGTCAAAGTATTTCCAAGCCATTCTTCAAAAGGGCGCATCAGCATTTTCCTCCGTAGAGATAGTATAGAGA TATCATGCACATACAAGAATAACAGAATAGAAAAACAGAAGAAAAATGAAGTGTCTAACTTCCCTCATGTGATTACAACT ATATTCTAGTTGGATCAATAGTGTCATCTATAAATATTCAAGTAAAAAATAGTGCAATTCCTAACTTCTTATCATAAATG TTATTGATCCATTTAGAATGAGATTGTTTAACCCGTGAGGTAGGTTCGATTATGTAGATCTTCTATTTACTATCAGTGTG AGCAAATGGTTTTTATCCAAATTGTAGCATTTGGGATGATTTGCCTATCCATTCATGCTCTATTGGCAATTTGGCATGCA CGGCAATATTTGCCCTTAGGTTGAGATATTAAGTAAAAGTCATGTAATTTTGCGGTCACTTTTCTTGATTGCAACAAAAC CCTTATTTTTTTAGTGTTCTGAGAATCATATGGTTTTGTTCTACTATAAAAATGGTTTGATGTAGAAGCAGCACATAATA TAAATGCAGATAAGTGAGGAATAGGAAAAAAGAGCCACACAGAATTTGGTAGAGAACATTAGGAAATTGGAGATTAATGT GTTATATTATATTATGCGTATTGTATTATTTAGGTCTAAGGGTAGTTAAGTCTTTAGCCTTTTGCTTATTGCCTATTTAT ATTTATTCTGTAGCTTTCAATTAGAACCTGAATATTCACAATGTAACCCTAGCCGTTTCACGTTCTCTCTTTTTCCCTCT CCCTTCTTTCTTTGTATTACGTACTATTGTTAACATAATGATGCAAAAGCATTGGAGATTTCCCCAATAACAATTCAATC CTTTCAAGAAAGTATGGTTAATTAGACAAGGAAGATTGCTAAGAAAGCTGTGGTGATATTTTGGGCAAAATGTAATGTAC GTGGTGATTCAAACGAATGTGCA
CDS sequence (LotjaGi2g1v0308900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGCGTTGTATCTTGTGATGACCATTCTGCCCAAGCAGGAGCCATCCTTGCTGTACCTGGATCCTCTTTAAATCT CTCACCACTCATCTTTCTTTTCTCCCTCAACCCCTTCTCAGAATCCAAAGCCAATAACATGGAACTAGAAGCAGGCCAAG TTACCAGATGGGAAGGCTATGTTGATTGGAGGAGCAGGCCTGCTCTTAGAGGCAGCCATGGAGGCATGCTTGCAGCCTCC TTCGTTCTGGGTGTGGAGATTTTGGAAAATTTGGCGTTTTTGGCCAATGCCAGCAATTTGGTATTGTACTTGAAGCAGTA CATGCACATGTCACCTTCGAAATCTGCCAATAATGTCACTAATTTCATGGGAACCGCCTTCCTCCTTGCACTTCTTGGTG GTTTCTTATCCGATGCATTTTTCACTTCTTATCATGTCTACCTGATAAGTGCACTTATTGAGTTCCTGGGTTTGATTGTA CTCACCATACAAGCTCGTTCACCTTCACTAAAGCCACCACAATGTGATGAAGGCACCATATGTCAGGAAGTTAATGGTGG AAAAGCAGCAATGTTGTTTGCTGGCCTCTATCTGGTGGCTCTTGGAGTTGGAGGAATCAAAGGATCATTGCCAGCACATG GTGGTGAGCAGTTTGATGAAAGCACCCCAACTGGAAGAAAGCAGAGATCAACCTTCTTCAACTACTTTGTGTTCTGCCTA TCATGTGGTGCCCTTATTGCTGTTACTCTTGTGGTGTGGGTTGAAGACAACAAAGGATGGGAATGGGGTTTTGCAATATC TACAATTACCATATTTGTATCCATCCCATTGTTCTTGGCAGGCTCTACTACTTACAGGAACAAGATCCCTTCAGGAAGCC CCCTCACAACCATTTCAAAGGTTCTTATTGCTGCTATACTGAATTGCTGCTGCACCAATAAAAACTCTAGCAATGCTGTT GTGAATATGGTGTCAAGCCCTTCTGATCCACACTCAGGTAGAAAAGAATCAGTGGAAGAAACTAACAAAGCAAGCACATC AGCTGAAACCCCATCAGAGTCCCTCAAATTCCTTAATGGAGCAGCTGCAAACAAGCCAGTATTTTCGTCATTAGAATGCA CTGTACAACAAGTTGAAGATGTCAAGATAGTATTGAAGGTACTGCCTGTATTTGCCTGCACCATTATGCTGAACTGTTGC TTGGCTCAGTTGTCCACATTCTCTGTTGAACAAGCTGCTACAATGAACACCAAATTGGGTTCCCTCAAGGTGCCACCGGC TTCTTTACCAGTTTTCCCAGTGCTCTTTATCATGATCCTAGCACCAATATATGACCATGTTATTATCCCTTATGCTCGGA GAACGACGAAATCAGAAATGGGCATCAGTCATCTCCAAAGGATTGGAATTGGATTAGTACTCTCTATAGTTGCCATGGCT GTGGCTGCTGTTGTTGAAGTGAAAAGGAAAAGGGTGGCCACTCACTCAGGCCTAGTTGATGATGCTACCAAACCACTACC TATCTCATTCCTTTGGATTGCTTTTCAGTACTTATTCCTTGGCTCTGCTGATCTTTTCACCTTGGCTGGGTTGTTGGAGT TTTTCTTCTCAGAAGCACCAATAAGGATGAGATCTTTGGCCACATCACTTTCATGGGCCTCTTTGGCAATCGGGTACTAC CTAAGTTCAGCCATTGTATCAATAGTAAACAGTGTCACTGGTAAAGGCTCCCACAAACCATGGCTATCTGGTGCCAACCT TAACCACTATCACCTAGAGAGGTTCTATTGGCTCATGTGTTTGCTGAGTGGGTTGAACTTCCTACATTACCTGTATTGGG CGGCTAGGTATAAATATAGAGGGAGAGGTACTGCTAATGAGTGA
Protein sequence (LotjaGi2g1v0308900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGVVSCDDHSAQAGAILAVPGSSLNLSPLIFLFSLNPFSESKANNMELEAGQVTRWEGYVDWRSRPALRGSHGGMLAAS FVLGVEILENLAFLANASNLVLYLKQYMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTSYHVYLISALIEFLGLIV LTIQARSPSLKPPQCDEGTICQEVNGGKAAMLFAGLYLVALGVGGIKGSLPAHGGEQFDESTPTGRKQRSTFFNYFVFCL SCGALIAVTLVVWVEDNKGWEWGFAISTITIFVSIPLFLAGSTTYRNKIPSGSPLTTISKVLIAAILNCCCTNKNSSNAV VNMVSSPSDPHSGRKESVEETNKASTSAETPSESLKFLNGAAANKPVFSSLECTVQQVEDVKIVLKVLPVFACTIMLNCC LAQLSTFSVEQAATMNTKLGSLKVPPASLPVFPVLFIMILAPIYDHVIIPYARRTTKSEMGISHLQRIGIGLVLSIVAMA VAAVVEVKRKRVATHSGLVDDATKPLPISFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPIRMRSLATSLSWASLAIGYY LSSAIVSIVNSVTGKGSHKPWLSGANLNHYHLERFYWLMCLLSGLNFLHYLYWAARYKYRGRGTANE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 75 | 75 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| PANTHER | 54 | 622 | 569 | 0.0 | ||
| PANTHER | 54 | 622 | 569 | 0.0 | – | |
| CDD | 76 | 616 | 541 | 0.0 | – | |
| Phobius | 76 | 104 | 29 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| SUPERFAMILY | 94 | 617 | 524 | 1.74E-19 | ||
| Phobius | 105 | 115 | 11 | - | – | |
| Phobius | 116 | 136 | 21 | - | – | |
| TMHMM | 119 | 136 | 18 | - | – | |
| Phobius | 137 | 141 | 5 | - | – | |
| Phobius | 142 | 163 | 22 | - | – | |
| TMHMM | 143 | 165 | 23 | - | – | |
| Pfam | 147 | 581 | 435 | 8.1E-108 | ||
| Phobius | 164 | 231 | 68 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 232 | 254 | 23 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 255 | 259 | 5 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 260 | 280 | 21 | - | – | |
| Phobius | 281 | 386 | 106 | - | – | |
| MobiDBLite | 322 | 352 | 31 | - | – | |
| Phobius | 387 | 407 | 21 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 408 | 426 | 19 | - | – | |
| Phobius | 427 | 447 | 21 | - | – | |
| TMHMM | 429 | 451 | 23 | - | – | |
| Phobius | 448 | 467 | 20 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 468 | 487 | 20 | - | – | |
| Phobius | 488 | 506 | 19 | - | – | |
| Phobius | 507 | 532 | 26 | - | – | |
| TMHMM | 510 | 532 | 23 | - | – | |
| Phobius | 533 | 551 | 19 | - | – | |
| Phobius | 552 | 574 | 23 | - | – | |
| TMHMM | 552 | 574 | 23 | - | – | |
| Phobius | 575 | 593 | 19 | - | – | |
| TMHMM | 594 | 613 | 20 | - | – | |
| Phobius | 594 | 613 | 20 | - | – | |
| Phobius | 614 | 627 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0308900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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