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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0309500 |
| Transcript ID | LotjaGi2g1v0309500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter NRT1-2; TAIR: AT1G69870.1 nitrate transporter 1.7; Swiss-Prot: sp|Q8RX77|PTR21_ARATH Protein NRT1/ PTR FAMILY 2.13; TrEMBL-Plants: tr|A0A0L9VMU8|A0A0L9VMU8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0309500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78398217..78402263) extracted from Lotus japonicus Gifu genome v1.2.
GTCACAAGGCTAAACGCAGCACACACGTCCAAACTCTCTGTCGTATTAGAATTCTACTATTCAATGCGAATGATACACTA CAACCCAATAATTATTAATCCTCGTCCATTCAACTTTTTGTGTTGTTTAAATCAGGGTCTTATGTCCTGTCCTTAGCTAT ATAAAAACCCAACATATGCCTTAAAGCCTTGAGAAGAGACTAGAGAGTACAAAGATATTCATATTGATGCCTTGAGAGGA GAGTACAGAGAGATCAAAACAATTCAGTTTAATTATAGAGATAGTGAGAAAATGTTGGGTGCAAGAGATAAGAGAACAAA TCTCTCTGGCTTTCCTTTCTCTTCTTGGTCCCTTGTGTGCTGCAGGAGTGGCTTTAACTCTTCAAGCTCAGCACCACAAA AGGATTTACCAAACAATGAAAATCTTACTAAGAATTGTTCATCAGAATCTTCTAATAAGAAGAAGCCTGGAGGATGGAAG GCCATGCCTTTTATTTTAGGTCTTATACTCTGTCTCTATTCTAATTAATTCTGTTTTTATAATTCCATTCTATATATATC ATGTCATTATATGATTTTGATACACACGGCACACACATCGCGATGCACTACAAATCCTTATTGAGTGCCTCACTTTTGTG GAGGTTTGTTGTGGCAGTTATTAACTGTCACAAAAGTTAGTGTACATTGGTGGTCAATATAATTTTACGAGTTTTGTGCT TCTTATAATATTAGCGGTCATTTTATTACAAATATTTTTAACTTTATTTTGGATTAATGTTATTACAGGGAATGAAACAT TTGAGAGGTTAGCAGCATTTGGTTTGTTTGCAAACTTTATGGTGTATTTGACAAGAGAGTTTCATTTAAACCAAGTTGAT GCTTCCAACATTCTCAACATATGGTCTGGTATTACAAATTTTTTCCCCTTGGTTGGGGCCTTCATTTCTGATGCCTACGT GGGCCGCTTCCGAACCATAGCTTTTGCTTCCTTTTCTTCTCTGCTGGTACATATTTCTCTCTATACACTCTTTAAGTTTA TTCAGACTTTTATTTATCATAGTCTCAGTCTCTCAGACTCTCTCAGCAGTGAACTCTCTTCATTAATACAGTTCACTAAC TTTCATGTAAATCTCGATCCGGAGAAGATTTGTAGTTGTCACTTTACTTATTTTATTATTTCAAATAGTCATGGAGTGGA CCATATGAACTTTAGTTTACACAAAAACAAAATTATCATTTTATTTTTACCTAACATCTATGAAACACCAACTTCGACAT GACACCGACACCCTGACACAGCTAATATTCAAAAAGTAAGACTTTGGAACACTGTTTATATACATAAATATGTGTACGTG TGTGTACTGTGTGCGCATGCAAACTGCCTACACGTGTACCTGTAGATAGATAGATAACTAGATATATTGACATTCTGAAA GTGAATATAAGTTAGTCTCTTTAAAAAGAAAATATGAAATCAATTTTCTTGTATGTGAGCTTCATAATTTGCTCATCCCT GTGATTGTACCACTCTTTTTCAAACATGCTAATTAGATTTTCTATGGAAAATTGATGTGACAGGGGATGATCATGATAAC TCTAACGGCCTGGTTACCAAAATTGCACCCTCCACCATGTTCTCCTCAGCAACTAGCATCAAATCAATGTGTTAAAGCTA GCACAACTCATGTGGGATCTCTGGGTATAGGACTCTTCTTTTTAAGCATAGGCTCCGCAGGTATTGTTAGAAATATAATA TAAAAATGATTTATGTGTTATTTATTCAATAATTCAAGTTTTTAGAATAATTGGTTCACGACAGGTATAAGGCCATGCAG CATACCATTTGGTGTGGATCAATTCGACCCCACAACAGATGAAGGGAAGAAAGGGATCAACAGCTTCTTTAATTGGTACT ACACCACATTCACAGTGGTGTTGTTGATCACTCAAACAGTGGTTGTCTATGTGCAAGACTCTGTTAGCTGGAAGATTGGT TTTGCCATACCAACTCTGTGCATGTTCTGTTCCATAATCTTTTTCTTTGTGGGGACAAGGATTTATGTTCATGTGAAGCC TGAAGGAAGCATTTTTTCCAGCATTGCACAAGTTCTAGTGGCTGCTTATAGAAAAAGAAATGTTAATCTTCCTAGTGAGA AGCAGGTAGATGGGGTTTTCTATGATCCTCCACTGAAGGAGAGTGCTGCTTTGTCAAAACTCCCCTTTACCAATCAATTC AGGTGAGATATCATTATCATTGAAGTGTGCCCAATATTGTGGTTTTATTATTGTATTTGTTGATCACTCTGCCATATCAT TGTACTAATAATTAGTAATTAGAGTTGGTATACAAACAATTGCTTGAAAGAAATCTACACCGGTTGCTTCTAGACCCAGC TTTTGGAATTAGTATTCTTTTTGCTAGTAAATTAGTAAAAGATACCAATCATTGAAAGATCATTTATTCAAATATGATAC TTACATACTTAAATAGCGCACATCTCATTTTTTTCTCTTTTTATCACAACAACAAACTAGGTGTTAGCAAATGTTATTTC TTTAATAAAATAGTATTTAAATATTATTTGTTCAATTAGTTATTTTTTACTTTATCTAATGTATTGATTTTTCGCCATTT TGTAACCAAAAAAAGATATATGTAACCTAAAAAAATTTCGTCATTTTAACTATTTTTTTAGGTTTGTACTTATCTATTAT ATATCACATTTATTATTTTTCACTTTTTTTCTAACACTCTGGGTGGGTGTGTTGTTAGTTTGGTGTCGGTGTGTAAGTGA GTTGTAAGTTTGCACTAAGTTTGCCCGTTCTGTGTATCATTTTTCATATTAATTACATGAAAATGTTATATTTTATTAGG ATCTTGAATAAAGCAGCTTTGATAATGGAGGGTGAGGTAAATCCAGATGGGAGCAGAGTAAATCAGTGGAATCTTGTGAG CATCCAGCAAGTAGAAGAGATCAAATGCTTAGCAAGAATTTTCCCAATCTGGGCAGCTGGTATCCTAGGCTTCACAGCCA TGGCACAACAAGGCACATTCACTGTATCACAAGCCATGAAAATGGACAGACACATAGGATCCAAATTCCAAATTCCAGCT GGTTCACTTGGAGTCATATCCTTCATCACAATAGGATTGTGGGTCCCATTCTATGACAGGTTCTTTGTCCCAGCAGTAAG AAGAATCACCAAACATGAAGGGGGCATCACTCTCCTCCAGAGAATTGGAATTGGCATGGTGTTCTCTGTTCTGTCCATGA TTGTAGCAGGCTTGGTGGAGAAAGTGAGAAGAGGAGTTGCAAATTCTAATCCCAACCCACTTGGCATTGCTCCAATGTCA GTGATGTGGCTGGCACCACAGCTAGTGTTGATGGGTCTGTGTGAGGCATTCAATGCAATTGGACTAATTGAATTCTTTAA CAGGCAATTTCCTGAACACATGAGGAGCATTGCTAATGCATTGTTCTCATGTTCTTTTGCTCTGGCTAGCTATGTTAGCA GCATATTAGTGAGCACAGTTCATCATGCCACTAGAACACACAGTCATCCAGATTGGTTGACAAATGATATCAATGCTGGG AGGCTTGATTACTTTTACTACCTCATTGCTGGGATTGGAGTGTTGAACTTGATTTATTTTCTGTATGTTGCACAAGGATA TCATTACAAGGGAAGTGTGGAACTCCAAGGTAAAGAAGATGTGGAGTTAGGTTCAAAGGGGGAATTAGATTACTATACTG GTCCTAGGTTTGAAGATTCTAAGTAATTGAGGGAGCAAAATTGTGTGTGTGTGAGAGAGATAGAGAGGTTCCTATCTTTT TTTCTATGTAATTTGAACCGCGAAATAAGGTTAATCGTCCAGTTTACTGGTTTTATACATATTAACTAGATATGATACTC ATGTGTTGCACGAATTTATTTTTAACATGAATGTTATTATAGGTTAAATAAAAATTAGAATAATTTTTAAAAAAAATGTG TTAATACATTTCAATAAGTAGTATTAGAATTCTCTTTTGTAAATAAT
CDS sequence (LotjaGi2g1v0309500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGGTGCAAGAGATAAGAGAACAAATCTCTCTGGCTTTCCTTTCTCTTCTTGGTCCCTTGTGTGCTGCAGGAGTGG CTTTAACTCTTCAAGCTCAGCACCACAAAAGGATTTACCAAACAATGAAAATCTTACTAAGAATTGTTCATCAGAATCTT CTAATAAGAAGAAGCCTGGAGGATGGAAGGCCATGCCTTTTATTTTAGGGAATGAAACATTTGAGAGGTTAGCAGCATTT GGTTTGTTTGCAAACTTTATGGTGTATTTGACAAGAGAGTTTCATTTAAACCAAGTTGATGCTTCCAACATTCTCAACAT ATGGTCTGGTATTACAAATTTTTTCCCCTTGGTTGGGGCCTTCATTTCTGATGCCTACGTGGGCCGCTTCCGAACCATAG CTTTTGCTTCCTTTTCTTCTCTGCTGGGGATGATCATGATAACTCTAACGGCCTGGTTACCAAAATTGCACCCTCCACCA TGTTCTCCTCAGCAACTAGCATCAAATCAATGTGTTAAAGCTAGCACAACTCATGTGGGATCTCTGGGTATAGGACTCTT CTTTTTAAGCATAGGCTCCGCAGGTATAAGGCCATGCAGCATACCATTTGGTGTGGATCAATTCGACCCCACAACAGATG AAGGGAAGAAAGGGATCAACAGCTTCTTTAATTGGTACTACACCACATTCACAGTGGTGTTGTTGATCACTCAAACAGTG GTTGTCTATGTGCAAGACTCTGTTAGCTGGAAGATTGGTTTTGCCATACCAACTCTGTGCATGTTCTGTTCCATAATCTT TTTCTTTGTGGGGACAAGGATTTATGTTCATGTGAAGCCTGAAGGAAGCATTTTTTCCAGCATTGCACAAGTTCTAGTGG CTGCTTATAGAAAAAGAAATGTTAATCTTCCTAGTGAGAAGCAGGTAGATGGGGTTTTCTATGATCCTCCACTGAAGGAG AGTGCTGCTTTGTCAAAACTCCCCTTTACCAATCAATTCAGGATCTTGAATAAAGCAGCTTTGATAATGGAGGGTGAGGT AAATCCAGATGGGAGCAGAGTAAATCAGTGGAATCTTGTGAGCATCCAGCAAGTAGAAGAGATCAAATGCTTAGCAAGAA TTTTCCCAATCTGGGCAGCTGGTATCCTAGGCTTCACAGCCATGGCACAACAAGGCACATTCACTGTATCACAAGCCATG AAAATGGACAGACACATAGGATCCAAATTCCAAATTCCAGCTGGTTCACTTGGAGTCATATCCTTCATCACAATAGGATT GTGGGTCCCATTCTATGACAGGTTCTTTGTCCCAGCAGTAAGAAGAATCACCAAACATGAAGGGGGCATCACTCTCCTCC AGAGAATTGGAATTGGCATGGTGTTCTCTGTTCTGTCCATGATTGTAGCAGGCTTGGTGGAGAAAGTGAGAAGAGGAGTT GCAAATTCTAATCCCAACCCACTTGGCATTGCTCCAATGTCAGTGATGTGGCTGGCACCACAGCTAGTGTTGATGGGTCT GTGTGAGGCATTCAATGCAATTGGACTAATTGAATTCTTTAACAGGCAATTTCCTGAACACATGAGGAGCATTGCTAATG CATTGTTCTCATGTTCTTTTGCTCTGGCTAGCTATGTTAGCAGCATATTAGTGAGCACAGTTCATCATGCCACTAGAACA CACAGTCATCCAGATTGGTTGACAAATGATATCAATGCTGGGAGGCTTGATTACTTTTACTACCTCATTGCTGGGATTGG AGTGTTGAACTTGATTTATTTTCTGTATGTTGCACAAGGATATCATTACAAGGGAAGTGTGGAACTCCAAGGTAAAGAAG ATGTGGAGTTAGGTTCAAAGGGGGAATTAGATTACTATACTGGTCCTAGGTTTGAAGATTCTAAGTAA
Protein sequence (LotjaGi2g1v0309500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGARDKRTNLSGFPFSSWSLVCCRSGFNSSSSAPQKDLPNNENLTKNCSSESSNKKKPGGWKAMPFILGNETFERLAAF GLFANFMVYLTREFHLNQVDASNILNIWSGITNFFPLVGAFISDAYVGRFRTIAFASFSSLLGMIMITLTAWLPKLHPPP CSPQQLASNQCVKASTTHVGSLGIGLFFLSIGSAGIRPCSIPFGVDQFDPTTDEGKKGINSFFNWYYTTFTVVLLITQTV VVYVQDSVSWKIGFAIPTLCMFCSIIFFFVGTRIYVHVKPEGSIFSSIAQVLVAAYRKRNVNLPSEKQVDGVFYDPPLKE SAALSKLPFTNQFRILNKAALIMEGEVNPDGSRVNQWNLVSIQQVEEIKCLARIFPIWAAGILGFTAMAQQGTFTVSQAM KMDRHIGSKFQIPAGSLGVISFITIGLWVPFYDRFFVPAVRRITKHEGGITLLQRIGIGMVFSVLSMIVAGLVEKVRRGV ANSNPNPLGIAPMSVMWLAPQLVLMGLCEAFNAIGLIEFFNRQFPEHMRSIANALFSCSFALASYVSSILVSTVHHATRT HSHPDWLTNDINAGRLDYFYYLIAGIGVLNLIYFLYVAQGYHYKGSVELQGKEDVELGSKGELDYYTGPRFEDSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 72 | 72 | - | – | |
| MobiDBLite | 31 | 59 | 29 | - | – | |
| MobiDBLite | 31 | 57 | 27 | - | – | |
| PANTHER | 42 | 616 | 575 | 0.0 | ||
| PANTHER | 42 | 616 | 575 | 0.0 | – | |
| SUPERFAMILY | 58 | 598 | 541 | 1.14E-26 | ||
| CDD | 65 | 601 | 537 | 0.0 | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 73 | 91 | 19 | - | – | |
| Phobius | 92 | 102 | 11 | - | – | |
| Phobius | 103 | 122 | 20 | - | – | |
| TMHMM | 104 | 123 | 20 | - | – | |
| Phobius | 123 | 133 | 11 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Pfam | 130 | 560 | 431 | 1.2E-82 | ||
| Phobius | 134 | 153 | 20 | - | – | |
| Phobius | 154 | 181 | 28 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 182 | 205 | 24 | - | – | |
| Phobius | 206 | 224 | 19 | - | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 225 | 244 | 20 | - | – | |
| Phobius | 245 | 249 | 5 | - | – | |
| Phobius | 250 | 270 | 21 | - | – | |
| TMHMM | 254 | 276 | 23 | - | – | |
| Phobius | 271 | 369 | 99 | - | – | |
| Phobius | 370 | 390 | 21 | - | – | |
| TMHMM | 371 | 390 | 20 | - | – | |
| Phobius | 391 | 409 | 19 | - | – | |
| Phobius | 410 | 431 | 22 | - | – | |
| TMHMM | 410 | 432 | 23 | - | – | |
| Phobius | 432 | 451 | 20 | - | – | |
| TMHMM | 452 | 474 | 23 | - | – | |
| Phobius | 452 | 473 | 22 | - | – | |
| Phobius | 474 | 492 | 19 | - | – | |
| Phobius | 493 | 520 | 28 | - | – | |
| TMHMM | 494 | 516 | 23 | - | – | |
| Phobius | 521 | 531 | 11 | - | – | |
| Phobius | 532 | 558 | 27 | - | – | |
| TMHMM | 536 | 558 | 23 | - | – | |
| Phobius | 559 | 577 | 19 | - | – | |
| TMHMM | 578 | 597 | 20 | - | – | |
| Phobius | 578 | 596 | 19 | - | – | |
| Phobius | 597 | 635 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0309500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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