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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0310700 |
| Transcript ID | LotjaGi2g1v0310700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Wall-associated receptor kinase-like protein; TAIR: AT1G10380.1 Putative membrane lipoprotein; Swiss-Prot: sp|Q9LZM4|WAKLQ_ARATH Wall-associated receptor kinase-like 20; TrEMBL-Plants: tr|G7K8A0|G7K8A0_MEDTR Wall-associated receptor kinase galacturonan-binding protein; Found in the gene: LotjaGi2g1v0310700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78495441..78499476) extracted from Lotus japonicus Gifu genome v1.2.
TCATTTAATTAATCTAATACAAGTGAAAGAAAATTCAGAACAAAAAGCGAAACAGAATTAACATCAAAAGCATTAAAGAA GTCCTTCTTTTGTTTCACATAGAGATCCTAACCGACTCGAACAAGATTGTCTCAGTGGAGGATACTTGTGGTTTAAACCA AAAATCCTTCTTTAACAGAAACAGTACTAGTTCCTTATTGCTTTCATTTTATTTCCACAACTAAAAAATGGAATTACTCA CAGCTTGAGGATTTCAACAACTCAATAAATAGTAGTACTAGCACCAAACTTATTAGCTAGTCCCTTCTCTTCTTACTCTA TCTCCTCCCTCAGAATCTCAATGGAGTTTAGCTATCCTCCTTCAGTTCCTCTTCTCTCCATTTTCCTTTTCCTGCTTCCT TCTTTGATCCTTGCTCAAATCTGCCAGAGAAACTGTGGCCAAACTCTCAAGTACCCATTCGGTAGTGGCCCCGGTTGTGG CGACCCTCGCTTCCAACCACATGTAACTTGCAGCGAACAAAGACTCACCTTCACAACTCACACAGGTTCCTACCCAATTA CCTCAATTGACTACACCAATCAACTCATACACATCTCAGATCCCACCATGTCAACCTGCTCTTGCACTCTACCAAGCAAA GGCTTTGGCTTAGATGGGGACGCGCCATTCACATTCGATGACAGCACCATCTTTGCTCTCGTAGACTGTTCAATGAACTC ATCATCCATATGCAAATCAAGAAGCTATGATGATGGAAGCAACTCCAAGCTTCAATGTGATCAAAGCACACCAATTTGTG ATTTTTTATATTCTTGCAGGCCTATTAGTACTATCAATCTACCAATCTCCACGTGCTGCGTTTACGCGCCGGTTAACCTT GGTCCTTCGTTTGACATGGTTCTGCAGAAGCTGCAATGCGCTTCGTACACAGGATTCTACAACTACAATGATCAGCAGTC AGATCCTGAAAAGTGGAACTATGGAATAGCACTCAAGTATAAATTTAGTGTCACAAATGATTATCCTCCCTCATGTGCTG CTTGTGAAAGGAGCAATGGATTCTGTGGGTACAGTGGACCTTATAATTCATTTATCTGCAACTGTCCTAATGGGTTTAAC ACAACTACAGATTGTTTCTTCATATCTGATAACAATGGTTTTAGAAATGGTAAGTGAAATTACCCTCTATCTTACTTGTC AAGTTATTATAATTTGGGAGGTCTAACTCTACCCAAAAACTAATTCAAGAGGTGAAGATTCCTTTCTACTGATAAGTACT TCATTAGTCATTTTTCTAGTCAATGTGAGACTTAACACAATTGCAGCTTAGTTCTTCAAATTTTTATGGCCAAAGTTAAT TTTTTTCTGACCCTTGTGTTTTCAGGGGTTGCTTGGTTGATTTATCCTGTGGCATGGTCTCTGGTTAGCTTCTTCTTGTA AGTTATTATGGATGGTGGTTCTACAATCAAGCTCATGATTCAACAATTAACCAATCAAAATGCTACTTGTAATTTGAATC TTCTCTTAGTTCATTTGTATTCTGAAGTTGGTGAATGTCAGAAAAGAAAACCCTTTGTGGAATTTAAATGCATTGCCTTT CATGATGTGTGAACCTAATAGACATTATATTCAGCTTCATTTTAATCAATGTTGTCTTTCCAAAAAAAAATTAATCAACG CTAACTGATCATAACTTTTTTTCAAAGGTTAAAAGCTTTGTGGCCAACCATGACCAACATTGAGTTTGTGATACAGCTAG TACAGTGAATCTTTAAAGTGAAAATGATAAGGAATTTGGAATGGGGTTCCAAGCCTTTGGTATGTAGCCGCTAACAAAGA ATCTCTAACTTTGTGAAGACCTCTTTCTTTTGCTTTTATCTCTAGTAGTGCCTCAGAAGCTGCAAATAAGGAGTGAAGCA CAATCCCCACATCCCTTTTCATGAAATGAAATGGCCTAAACACATTTAAGTATTCAATTCTTCTCACAAGGAAAACACAT ATACTTTAAAACTACGTATCTAATAATTATTAGTTTCTTCACAATAATAAAAATTTAATTACTTTTACATCAAGCATATT ATTTTAATAAGTATTAACATAGACATACAACATATGACATCTTAGGACCTATTTGGTTTGTCCATTTTCAATTTTCATTT CAAAGAAAATAAAAATAAAGGTAAAAATATGTTTGGGTGATATTTAGAAAATATTTTTAATTTTTTTTTAAAATATGATC AAAATAGAAAATAAGAAAAACTTGTTTTCAATGAATACGAGGTGCTACCATCATCGTTACCACACCACCACTGCCACATG GATGAGTTCTGCCGTGAAGAAGTTGGTGTCGTTTATTGTGAACATCAAGCATGTCACAACATCTATCTACCTCAATCAAT TGGTGAAGGTTAGAAAACTCAAGACAATTTTGACTTTAAGTTTCCTTTGAGCAAAGCTGAATTTGCTTGCTTTTAACTGA ATGTTTGATTTTAAGTTAAACCCAACTGAACCCCAACAAAAGTACAACGCATTACAAAATCTCATAACGCACATTCTCGA ATTTCAATCTAGCTAATGTGATTTACAACTAAACATGCTTTAAAATGTCTTCCCTACAAATTCAACCATAAACCAATGAA TTACATCTGACTGAATTTTAAGATATTATTTGAGTAAACTTTCTCATAACACCACTTTCTCGTAGATTTTTCCACTTTTC TCACCCAACTCATGACTATTGAGTGTTTTCTAATACTTCATCTGTTAATTAATATATGTCACTTTAAGATTTTGACACAT CTATTAAGAGTAGTATTGATGTTATTGTTTCAATTAAAATTATTACCTGACTTCCTTATATACCCTTTATCTTTTTTACG AATTCTAACTCTTCAATTTTTCTTATCTCTCTTAAAATTATAAAAGTGATAGATAAATAGGAAAAAAAGAGAGATAGATT TATAGGATATATAGGAACAAATTACAAAGGGAGTATTGCGAACAATCGATGCCCCTCATCTTGGATGGAGACCCTTCTAT TTATTTCTTATTTTCCTTTAACATTAATTCTGCACTAAATTTACCTTTTCACCAATCTAAAATTTCCCTATGAATATCTC AAATATACTAAACTATGAAATAAAAATGAACTTCGGGACTAAAGTTTTTCGAGTACTGATACCATCATGCTTTGGCCTTC CAAAATAGCAGTGTTCATAGGACACTTGATACCCCTCTTCTTTCTGCAGCAACAACTCATGCGTGAAGGAACATAGGGAA ATGAAGTTAATGCAGAAAAAACTTATTCTGCTTCTGCGCCTGTGCGCCATTTTGCTCCTATGATGTTACAAAATTTACAA ACCATTGATTTGTTCCTTCACCAATTGTTGTTTCTGCATTTCCCAACTATAACTCTACATGTGATATACCTGGGGGGATG GATCAAAAAGTGGGGCAAAACAACAAACCAATAGGCACAACAGTCTTCATGATACCAAAGTAACCCCCCAAAACAAACCC TTCAAAGAAAGGGCGTATTTACAGAGATATATTATGACCATAGAACTTGCCTAGCCTAGCTGTGCTTCGATCTTTTTTTA CTTACAACCTCTTTTGTCATCTCATGTTGCAACATAGTGGTCTCACTTGATGTTGCAATTTATCCCACATGCAGGTCATC TGTCGCGGAGATTGGTAATGAGCGGTGTAGTAATCTTCAATGCACCCAAATTGGCAGAACTTCAAGCTGTGCACATACTC TACTTGTCTTGACATGTTGAACTGCTCCACCCACATTCCCATGCTCACATCCTCCATTTTAAATAACTGCACCGCATTGA AATTGGTTAAACTAATATCCAACACCGTCCGGTCCTTAAATATATGCATAAACTAGAATATGTTATCAGTGTGTGTTTGG AAAACTGATTAGTTTTCATACTGAGGAGAGAAGTGATTCTGATAGTAATTAGTAAATTAGTAACTACTTCTTGTAGCTTT GGTGGGAGGGAAGTGATTATGAAATATTTCAGCATG
CDS sequence (LotjaGi2g1v0310700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTAGCTATCCTCCTTCAGTTCCTCTTCTCTCCATTTTCCTTTTCCTGCTTCCTTCTTTGATCCTTGCTCAAAT CTGCCAGAGAAACTGTGGCCAAACTCTCAAGTACCCATTCGGTAGTGGCCCCGGTTGTGGCGACCCTCGCTTCCAACCAC ATGTAACTTGCAGCGAACAAAGACTCACCTTCACAACTCACACAGGTTCCTACCCAATTACCTCAATTGACTACACCAAT CAACTCATACACATCTCAGATCCCACCATGTCAACCTGCTCTTGCACTCTACCAAGCAAAGGCTTTGGCTTAGATGGGGA CGCGCCATTCACATTCGATGACAGCACCATCTTTGCTCTCGTAGACTGTTCAATGAACTCATCATCCATATGCAAATCAA GAAGCTATGATGATGGAAGCAACTCCAAGCTTCAATGTGATCAAAGCACACCAATTTGTGATTTTTTATATTCTTGCAGG CCTATTAGTACTATCAATCTACCAATCTCCACGTGCTGCGTTTACGCGCCGGTTAACCTTGGTCCTTCGTTTGACATGGT TCTGCAGAAGCTGCAATGCGCTTCGTACACAGGATTCTACAACTACAATGATCAGCAGTCAGATCCTGAAAAGTGGAACT ATGGAATAGCACTCAAGTATAAATTTAGTGTCACAAATGATTATCCTCCCTCATGTGCTGCTTGTGAAAGGAGCAATGGA TTCTGTGGGTACAGTGGACCTTATAATTCATTTATCTGCAACTGTCCTAATGGGTTTAACACAACTACAGATTGTTTCTT CATATCTGATAACAATGGTTTTAGAAATGGGGTTGCTTGGTTGATTTATCCTGTGGCATGGTCTCTGGTTAGCTTCTTCT TGTCATCTGTCGCGGAGATTGGTAATGAGCGGTGTAGTAATCTTCAATGCACCCAAATTGGCAGAACTTCAAGCTGTGCA CATACTCTACTTGTCTTGACATGTTGA
Protein sequence (LotjaGi2g1v0310700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFSYPPSVPLLSIFLFLLPSLILAQICQRNCGQTLKYPFGSGPGCGDPRFQPHVTCSEQRLTFTTHTGSYPITSIDYTN QLIHISDPTMSTCSCTLPSKGFGLDGDAPFTFDDSTIFALVDCSMNSSSICKSRSYDDGSNSKLQCDQSTPICDFLYSCR PISTINLPISTCCVYAPVNLGPSFDMVLQKLQCASYTGFYNYNDQQSDPEKWNYGIALKYKFSVTNDYPPSCAACERSNG FCGYSGPYNSFICNCPNGFNTTTDCFFISDNNGFRNGVAWLIYPVAWSLVSFFLSSVAEIGNERCSNLQCTQIGRTSSCA HTLLVLTC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| PANTHER | 11 | 292 | 282 | 1.5E-136 | – | |
| PANTHER | 11 | 292 | 282 | 1.5E-136 | – | |
| Phobius | 20 | 25 | 6 | - | – | |
| Phobius | 26 | 328 | 303 | - | – | |
| Pfam | 27 | 124 | 98 | 1.7E-15 | ||
| Pfam | 204 | 257 | 54 | 3.6E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Polysaccharide binding | Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. |
Expression pattern of LotjaGi2g1v0310700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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