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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0310900 |
| Transcript ID | LotjaGi2g1v0310900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component 8; TAIR: AT1G10385.1 Vps51/Vps67 family (components of vesicular transport) protein; Swiss-Prot: sp|F4I4B6|EX84A_ARATH Exocyst complex component EXO84A; TrEMBL-Plants: tr|A0A1J7FYA8|A0A1J7FYA8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0310900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78506165..78512136) extracted from Lotus japonicus Gifu genome v1.2.
GTATAAGTCAACAAAATATCAAGTTGCTTATTCTGTCCCCGGATCAAACTTTTGATCATTACACATTGCATATAAGAATG AAACATATATTATGATATATCCCACGACGATAATTATAAGAATGAAACATATATTATGAAACACTTTTCTCCTCTTATTT TTTCAACCCTTGGATGTATCAAAGGGTTACCATTTAATGTATAGTTATTTTTTAGGTGCTTTATTGTGGTAAATTATCTT AGCCACATGATGCATCTGACGGTCCAAATCACTGCTGGAGGGGCTGGACAGATTTGGAGTGCTTGAGAGGATCCGTATTA TGCGTATGCTTGGAAATGAAATGGCTGCACCACATGTTATGGTTGTCGCACTTTTCTTCTTCTGTCTCACATACACTAAC ATTTCCTATCAATCATATCAATGAATCTCACTCTCTTTATCATCACTTTCATTTCATCAATGATTCCTTCATAGGAGGCA ATTGAATTGATTTCAACATTTGCATTGCCTTGGAGACGAAGATAATGGATCAGTCACCATTCACCACTCCAAGAGGGTCT ATCTCATCAAGCGTAGGAGACCCTTTAGAATTGGAGGTCAATCTCACACTCAGCGAAAAGCTCAAGGTTTTCAAAAGCTC CACCTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCAGCATGAACGAGAAGGTCCCTCTCTCACACATTCTATAAA TTTCATTTCATGTTTCCATGCAAATCGGATAAATCAACATTTTTTTTATGATTGATCATGAAATTGTTGTTGTGCTTATA AGCAACATTCATACATAAAAAACATTTAATATGTCAACTATGTTAGATGTTAGTTCTTAACATCCCGTTATTTGAGCTTA TCTTATAGCATAAATGGTTATGCAAGTGTACCTGAGAGTTTATGTAATTACTTATGAGTTATGACTAACCTATAAGTTGT TTTGAGTTTGTTTTCATGACGTGTTAATCTTAGCTTGCGAAGAAGAGTTCATGCTTATCTATAACCTTTGTTCAGAGAGT TTCTCAAATTAGTTTATGAATAAGCGTTTATGCGATAAATGCTTATCCCATGAGCAGCGCTTTAATTAAGCTATTTGCCT AAATACACTCATAATCCTAGAGGCATCAATTAAAAAATAAAAAGGTTCATCCTAGCAAAAGGTGCAGGAGAAGACTGGTT TCAGTAATTCTAACTCTCAAGAATTCAACTAATTTTGCTTGTTTTAAAAGTATAAATATGAATCATGATTTTGATTTCAA TGCCAATGTGTTAGGCAGTGCCAAGTGCCAACTCTTGGTAAATGTCAGGTGGTTATGGAAGTTCTACTGAGTTTTTTCCG TTTGATTGAAGAAAACCTTATGCCTTATTTAATCCATATTTGTAATGTTTACAGGAGATAAGACACTTGTGTGCTTATCT TGTTGACCTGAAGAAGGCATCTGCAGAAGAAATGCGCAAAAGTGTTCTTGCTAATTACTCTGCCTTCATACGGTGAGTGT ACACCCCAAAGTGTTTTTAGGGATTTATCAATCCAGCGTCTTCCGTTTCAGAAGCTCATTTGATAACAGATTGCATTATT TTGCACATCTCAAGTGGTTATATTATATGAACTAGGAAGTTTAGAAACATGTACTTGTGACATAGTTCTGTCATCATTTA ACTTCTGGGTGGGGATTTCTTAGGTATCCTTAGCTCCTTTCCCATGGTATATTGCATGAAAATTGAGGCTAGAAGCTACC GGTATTAAGCTCATAGGATAGGAGCTTTCGTGTCGTCCTTAATGAGGAATGCATTCTGAAAATATTTGACACTTATTCCT GGCACAGTTTCAGAAGAGAAAGTAGATGAGGAGAGGGAATAAGAAACTGAGCTGGCTTGGAATTCTGTTGAACAGCTTTT TTGTTCTGCTAATATAAAATTAGCTGTGAAAATTAGTTGGATGGAAGAGGAATATAGATTCTGTTATATTGGTTTAATAT ATAAGATAGGATACTGTGAAGAAATTAGGCAAAATGTTGACTAAGAGCTTTAATTCATCTAGTTACTTTTGTACAAGTAA GTTGGCTTTTATTCTTCTGGTTAACTTTGAAAGATATTATTCGTAGTTTCATACTATTTGAACACAGCATTGTCCCAGAT CTAGTAACGAAGTGCATCCTGTTTGTTTGCATTTAACTATATGTATTTTCTATAGTTTAAGCTTAGAAACTTCAGCTTCT ATTTATGTGCAGTACATCCAAAGAGATTTCAGATCTTGAGGGGGAGCTTCTTTCCATGAGAAATCTTCTATCCACTCAGG CTGCTTTGGTTCATGGTGTAGCAGACGGGTGTCAGCTTAGTTCCTTGATGACTGGAAACGAAGATTCAGACATGGACAAT ATACTAAATGAGAAAACAGATATATCCAAGACAGAAAAATGGCTAATAGGATATCTAGAAACCCTTGAAGTTCTATTAGC AGAGAAAAGAGTGGATGAAGCAATGGCTGCCTTGGACGAAGGAGAAAAAATGGCGCAAGAAATTAGTGAAGGGAGGACAA CCTTGAGTCCAAGTTTATTCAAGGCATTGCAAGATGCCATCACTGAACACAGACAAAAATTAGCTGGTCAGCTAGCAGAA ACTCTCAGCCAGGCATCAACGCGAAGCGCAGAAATTCGCTCAACGGCATTAGCATTGAAAATTCTCGGGGACGGTCCCCG TGCTCATACATTACTACTTAACTCTCACAAAGAAAAGTTGCAGCGTGGAATGCAGAGTATTCACTCCACCAGTTACGGCG GAGTTGGGGCATACACTTCTGCCCTTTCACAGCTTGTTTTTTCAACCATTTCACAAGCAGCATCAGATTCTTTGACAGTG TTTGCCGAAGAAGAACCTGCATATACTTCTGAGCTAGTAAGCTGGGCAGTTACACAATCTGAGCATTTTGCTCTTCTCCT TAAGAAACGTATACTCGCATCAACAGCTGCCGCAGGAGGTTTGAGAATCGCGTCTGAATGTGTTCATGTTTGCTTGAATC ACTGCCATCTGTTAGAGGCCAGTGGGATGGCCCTTTCCCCTGTCTTACTAAAACATTTTAAACCCTTTGTTGAGCAAGCA CTGAACACAAATTTGAAAAGAATTGAACAAAGTAGTGCTGCACTGGCTGCTGCAGATGATTGGTTGCTTGCTTTTGCACC AACCAGCAGGAGTTCAGGCCTACCTCCAACCTCTTCCTATAGTAACTTAAGTTCATTCCAGCCAAAGCTTTCAAGCAGCG CTCACAAATTCAACACAATGGTGCAGGTGATTACTATTATGAGCCCATTTGGTTCCTGTTAAAAAGTATGAAAATGGAAA ATAACACATCTCGAGGCACTTTTTGTTGAAGTAGCAAGTAGCAACTTACTATTTCAACAAAAAGTGCATCGATGTATTAT TTTCCCGTTTTCATACTTTCGCATCCAAACTGACTATATCTATTTTCAATGTTATCCCGGCTTGAAATATAAAGGCCATT TAGCATGATTTCACAAATTTTTTGAATTTGATAAAATCTCTAAGAATAGTAGAAAACCAATGCTAAGTGGCTTTTATTAT TTCAAAAATATTAATGTTGACCATCAAAGTCAGGCAAGGCCAACTGAGAATATAATGTTGTAAAAAAAGTTCACGAAGCT TCATCACCCCCCTCTCCTCCTCAATTTCTCTTAGCTTGAGATGCTTAATACAGTTTCCCATGGTCTGAACAGGAGCTTTT CGAAGATGTAGGACCTCTAGAAAGCCTGCAATTGGATGGTCTTGCATTAGAAGGCCTTCTACAAGTATTTGGCTTCTATG TCAATCTGTTAATAGATGCATTGCCAGCTTCAATTGTAACTGAGAACCTGGAAGGCTCAGGGCACAAAATCGTTAAGATT GCTGAGACTGAAGAACAGCAGATAGCATTGCTGGCTAATGCAATATTGCTAGCTGATGAGCTGCTCCCGCGAGCTGTTGT CAAGCTTTCGCATAGCACCAGGGGTGATGAGTCTCAGAGAAGGGGGCCAGACAAACAAAGGCCTCCAGAACAGCGTGAGC TGAAGAAAAGGCTACAGCGCGAAGTTGATCGTCTGAGAGACAGTTTCTGCAGGCAACATGCTCTTGAACTCATCTTCACA GAAGAAGGGGACGCACTTCTGAATGCACTAATGTATTTGAGTATGGATGATGGGAAAGTGGAGCAACCTGAATGGTTTCC TTCTCCAATTTTTCAGGTAATATTTGTAACACAAAATATACTTCCTTTGGTGATATGTTGTTATGCCTTTGATTTGAAAT TTTGAAGCAGTATAAAATATGTGTTCTCCTTAGTACTCAGATACATGTGTTGATATAAGCATGGTCGTGTTTTTTGAATT CTAAGGCTTATCATTCTTTAAACAATTGTTCAGGAGCTTTTTGGAAAGCTTACACGAGTGGCATACATTGCAACTGATGT GTTTGTGGGAAGGGATAGGTTTGCCACTGTTTTATTGATGAGACTCGCGGAAACAGTGGTCCTGTGGCTTTCAGAGGACC AAGCCTTTTGGGAAGAGATTGAGACAGGCCCAACGCCTTTGGGTCCCCTTGGCCTTCAACAGGTAGTCACTTGAATGAGT TCATTGAGTATCACAGTCACTAGTTGAGAGTGATTCCAATTAACTGTTAATTAAAGTTTCTCTATGCTCAATGAGTATTA GAAAGAACCTCTTTCAAAAGTTGACTTTAGAAGCCTGTAAAAATCAATAAGGTTTGGTATAAAGATTTTATAAGTTGCTC TTGAGAGCAATTGAGTGCTTGATCAAAGGACATGCAAATAGTAAAAATAAAAATGATAAATAACGACAATATTCATTGTT ATTTTGTGAAAAAAATTAGTTGTTTTAATATTTCAAAAGCATAGCTTCAAAAACTATCCTCAAATAGAATTCCTTAATAC ACTACAGCTATATTTAAACTGCAGTTTGTGGATCACTCACCTAAAATGATATCACTCACAGATGATAATTTGTGCAGCTT TATTTGGACATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACCTATCTCGTCATCTGCATCAAGCTATTAAAAA CATCATTGGTAGAGCTATTGATGCTGTTGCTGCTACAGGGCTAGATCCCAACAGGTACATCTATCTAGATTGAAAGAACA TGTGTTATATATTATTCTTAAATATGAACGGGAAACTTGTGCTTAGAGCTATATCATATAGTAAATTTATGATGGAATCA TCTATCTCTTTTATCTACTTCATACTGATTCAGAACCTTTGAATGGCAGTGTCTTGCCAGAGGATGAGTGGTTTGTAGAA GTTTCCGAAATAGCTATAAAGATGTTAACTGGGAAAGCCGCCTTTGACAATGTAGAGGGAGATGATAATAGCCCCACCGC ACTCGGCTAATTATAATTAATGTCATCAGGTCACTTTCAGGGAAGGGATTACATTCATTCACATGTCAGTCTTGACATAT TATAGAGAGCAGAAGGGAAAGATGAAGTTGAAGAGAAACAAATATATATTTGTCATCTACCCTGCTTCTTGATCAATCAA CTGACTCTGATAAGTGGTGCTTGTTATCTGGGCAGAAGGAATGTGTTTCATTTCAAGCTTTTGACGACGAATTACATTAA AATTAGTGTAATTCATTACTAGATATCATTCCCATGCTGCACATTGCAGGTATCCTAAAGGACACAGGACATCATGATCT AACATTAGTCCCACGGTACTATCTGTTGAAACTTGGTTCCCATTTGAAGCCTAGGATAATTCAGACCACAAGAATTTCTA GAACTATAAAATAATGCCAGGTGCTTCAGGTTTTGGATTCATTGTAGCTACTTGTATATTACATTTTAAGCTGTAACCAT AGCCAATTGATTAATTTAACATTACTTTTATCTTAATTAATGTTTAATTTAT
CDS sequence (LotjaGi2g1v0310900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAGTCACCATTCACCACTCCAAGAGGGTCTATCTCATCAAGCGTAGGAGACCCTTTAGAATTGGAGGTCAATCT CACACTCAGCGAAAAGCTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCAGCA TGAACGAGAAGGAGATAAGACACTTGTGTGCTTATCTTGTTGACCTGAAGAAGGCATCTGCAGAAGAAATGCGCAAAAGT GTTCTTGCTAATTACTCTGCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGGGAGCTTCTTTCCATGAGAAA TCTTCTATCCACTCAGGCTGCTTTGGTTCATGGTGTAGCAGACGGGTGTCAGCTTAGTTCCTTGATGACTGGAAACGAAG ATTCAGACATGGACAATATACTAAATGAGAAAACAGATATATCCAAGACAGAAAAATGGCTAATAGGATATCTAGAAACC CTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCAATGGCTGCCTTGGACGAAGGAGAAAAAATGGCGCAAGAAAT TAGTGAAGGGAGGACAACCTTGAGTCCAAGTTTATTCAAGGCATTGCAAGATGCCATCACTGAACACAGACAAAAATTAG CTGGTCAGCTAGCAGAAACTCTCAGCCAGGCATCAACGCGAAGCGCAGAAATTCGCTCAACGGCATTAGCATTGAAAATT CTCGGGGACGGTCCCCGTGCTCATACATTACTACTTAACTCTCACAAAGAAAAGTTGCAGCGTGGAATGCAGAGTATTCA CTCCACCAGTTACGGCGGAGTTGGGGCATACACTTCTGCCCTTTCACAGCTTGTTTTTTCAACCATTTCACAAGCAGCAT CAGATTCTTTGACAGTGTTTGCCGAAGAAGAACCTGCATATACTTCTGAGCTAGTAAGCTGGGCAGTTACACAATCTGAG CATTTTGCTCTTCTCCTTAAGAAACGTATACTCGCATCAACAGCTGCCGCAGGAGGTTTGAGAATCGCGTCTGAATGTGT TCATGTTTGCTTGAATCACTGCCATCTGTTAGAGGCCAGTGGGATGGCCCTTTCCCCTGTCTTACTAAAACATTTTAAAC CCTTTGTTGAGCAAGCACTGAACACAAATTTGAAAAGAATTGAACAAAGTAGTGCTGCACTGGCTGCTGCAGATGATTGG TTGCTTGCTTTTGCACCAACCAGCAGGAGTTCAGGCCTACCTCCAACCTCTTCCTATAGTAACTTAAGTTCATTCCAGCC AAAGCTTTCAAGCAGCGCTCACAAATTCAACACAATGGTGCAGGAGCTTTTCGAAGATGTAGGACCTCTAGAAAGCCTGC AATTGGATGGTCTTGCATTAGAAGGCCTTCTACAAGTATTTGGCTTCTATGTCAATCTGTTAATAGATGCATTGCCAGCT TCAATTGTAACTGAGAACCTGGAAGGCTCAGGGCACAAAATCGTTAAGATTGCTGAGACTGAAGAACAGCAGATAGCATT GCTGGCTAATGCAATATTGCTAGCTGATGAGCTGCTCCCGCGAGCTGTTGTCAAGCTTTCGCATAGCACCAGGGGTGATG AGTCTCAGAGAAGGGGGCCAGACAAACAAAGGCCTCCAGAACAGCGTGAGCTGAAGAAAAGGCTACAGCGCGAAGTTGAT CGTCTGAGAGACAGTTTCTGCAGGCAACATGCTCTTGAACTCATCTTCACAGAAGAAGGGGACGCACTTCTGAATGCACT AATGTATTTGAGTATGGATGATGGGAAAGTGGAGCAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGCTTTTTGGAA AGCTTACACGAGTGGCATACATTGCAACTGATGTGTTTGTGGGAAGGGATAGGTTTGCCACTGTTTTATTGATGAGACTC GCGGAAACAGTGGTCCTGTGGCTTTCAGAGGACCAAGCCTTTTGGGAAGAGATTGAGACAGGCCCAACGCCTTTGGGTCC CCTTGGCCTTCAACAGCTTTATTTGGACATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACCTATCTCGTCATC TGCATCAAGCTATTAAAAACATCATTGGTAGAGCTATTGATGCTGTTGCTGCTACAGGGCTAGATCCCAACAGTGTCTTG CCAGAGGATGAGTGGTTTGTAGAAGTTTCCGAAATAGCTATAAAGATGTTAACTGGGAAAGCCGCCTTTGACAATGTAGA GGGAGATGATAATAGCCCCACCGCACTCGGCTAA
Protein sequence (LotjaGi2g1v0310900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQSPFTTPRGSISSSVGDPLELEVNLTLSEKLKVFKSSTFDPNAYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKS VLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILNEKTDISKTEKWLIGYLET LEVLLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQASTRSAEIRSTALALKI LGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVGAYTSALSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSE HFALLLKKRILASTAAAGGLRIASECVHVCLNHCHLLEASGMALSPVLLKHFKPFVEQALNTNLKRIEQSSAALAAADDW LLAFAPTSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNTMVQELFEDVGPLESLQLDGLALEGLLQVFGFYVNLLIDALPA SIVTENLEGSGHKIVKIAETEEQQIALLANAILLADELLPRAVVKLSHSTRGDESQRRGPDKQRPPEQRELKKRLQREVD RLRDSFCRQHALELIFTEEGDALLNALMYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRL AETVVLWLSEDQAFWEEIETGPTPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAIDAVAATGLDPNSVL PEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPTALG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 755 | 746 | 0.0 | – | |
| PANTHER | 10 | 755 | 746 | 0.0 | ||
| Pfam | 36 | 114 | 79 | 4.5E-12 | – | |
| SUPERFAMILY | 144 | 380 | 237 | 8.37E-49 | ||
| Pfam | 152 | 364 | 213 | 2.1E-19 | ||
| MobiDBLite | 529 | 551 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi2g1v0310900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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