Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0311900 |
| Transcript ID | LotjaGi2g1v0311900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cofactor assembly of complex protein C, putative; TAIR: AT1G59840.1 cofactor assembly of complex C; Swiss-Prot: sp|Q6NQK9|CCB4_ARATH Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic; TrEMBL-Plants: tr|V7CJL3|V7CJL3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0311900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78645752..78652664) extracted from Lotus japonicus Gifu genome v1.2.
GGGCAAAAACATGACATACTTTCACTATCAAATTCAATCAATGCAGCAGTACCACCGTGTCCGTTGATAACAAACTCCCA TGGAAGCGGGAACTGCGTTCCGTGTCGTGGGTGTTGTCACTGTCAACACTCACATTCCCATTCCCATTTTCAAGAAATCC AAAACCACCGCATTCCAATCTCGCTTCTTCACTTGTTCATCTCCCTCTCCTTCTTCCACTAGTTACCGAGGTCCCAAACC CAAACGCGATTTCCTCGCCGATTGGGTTTCCCAAAACGACGACGTCGTTCGCACCTTACCGATCTACGTCGGCTCCGCCT CCCTCTTCGCCGTCCTCTTCAATCGCGCCATTTCCGGCATCGCCCCCGTCGCCGACGCCGGCAGTTCACAATCCAGAGCT GACCTCTTGACTTTAGGATTGGCAGTCACCAATATTTTGGCTGGCCTTGTTTGGCTCTCCATAAGACCCAAATCTATAGC TGTGGTGAGCCTCTTTTTTCATTGTTGTGTTTTTCATTCTCTTGTAGTGTGTGTTTGTTTTGGCTTAATTGAGAAAATAA TGATTGCTTATGGTGCTTTTTGTAGAAGCTAGAAAATTTTACAAGGATTTTATTTGTCTACAATAAGCTAACTTAAAGAT GCCATAACAGGCTTACTTTTGTGCAGGTAAATCCTCAAGGGGTTCAATGCAGGAGGTTGTGCACTGCTCTCCCTCATGTT GCACTTACTGAGCTGCTCTGGTAATGAACATTATGTATACTTGTTGGCTTCATAGATTGAAAATTTGGTTCATGATCGTG GCGTTTATTAGTTGTTCTAACTTAGCAAATGCACATTATGTCCAATAAAAGAAAGGGTGCTTTGTGGCTTGATATTATGC TTGTGTTTTCCACATGTTCTGTTGATAAATTAGATATCAATATGTATTTAAAAGAATGTGGTATCTTCGACTTTTATAGA GGCATCTTCATTCTGTGGTTGGTTTGGCGTTGCTTGCGGGGTTTTTAGAGGGTTTTTGCTGTAGTGTCTGAGTTTTTGCC GACTTTTGTTGGCAAGGGGTTGTTTCTCAACATTATCTATTTATGTAAATATATTTCTCTTTCAAAAAAAGAATGTGGTA TCTTTTGTATGGGAACTATTGCTTTAAATAGTTAGTTCCTTTTTCTGTTTATTAACAAGAGCAGTATCTTTCGTATCTAT TTTCAGGGTATGGGAATCTCTATCAGATATCACCTGCTGCCGATCACTTGTTATTGTTTATGAGAGCAGTTGTGTACTTC AAATTGGTTTTGCTGCAGAGTCTTCTTCCGGGGATGGTGAGGCTGTAAGTGTGGACATTAATAAATTGATCCAAGGATCA GTATACCAGGGTGTAATGAAATCTGGAGCCCGTAAGTTTCAAACCATATCAAACACTGAATTTGCTGCTGATTCAGATAT CAGTATGGTTTTTTTTCTGAAGATGTGCCCCAGTATTAATGAAAATTTGCTGCGTTTTTTACCTTTGTTCAGAGAGTTAC TTGGCTAATCTATCTCTTTATCCTGGGAAATCTGAGCTGTCATTTCTACCTTCAAATACTCAGGTATCGCGTTTCAATGT GTTAAACTGGGCCATGTTACTTAGGATATTTCTATGCAATTTATTATTACCCAGTGTTCAAACTAATTCTTTTGGTCTAT CATTCAAAACCTGTATGAAGCGAGAACTGTTGATTAGAAAGAGTGAAACATATAGGTAGGGTGTGGGTGGATTTTGGGAC AAGTGGGTCCAGTAAAGTAGTTGTATATCCAGTAAAGTATTGTTTAAATTTAATGAGAATTTGGATAAACTTTGACTATG AAATTAACTGGCAATTTATAGTTTAAATACGTAACATGATTTCAGCCATACTTTTGCGTTAGAAAGTTCTTTTCCTTAAA ATTCCCGAAGCCCTTGCAAAGTTGAGTGTAATTATCACATTGTCATTGGTCATTATCGTCATTCATTGTATGTGAGGGCG AAAATAGGAAAGAATTCAAGGAAGCAGTTAGAAGGGACTCACTGGAGGGTGTATTGTTGTTTTAAGTTTATTCCTAATGT CCATATGTAAAGGGTGCATATTATTCCAGTGATATATGTTAAACTATTAGACTTGTTGAAGGGACAAGGAAGTCTGTTGG AGCAGTAATTAATTCCTTAGAAACCAATACATTTTGTAAATTCTTCCAACATCAAACCTAATGAATCTAATTCCACCCCA TCCCCAATTTGGAGTTCTGGAATGGAACCAAACAAATTATTATTTACCTATCTCCATACCATTCCATCATCTTACAAACC AGGAACAAAATGGTGAAATTACAGAGAGAGAGGAGAAACCAGAGAAGAGAGTCAGAGAAGGTAGAATAGAACACTTCTGT GATGATAAAGTGAGTGACAAACTGAGAAACAATGAAATTCTTGGTGTAAGGGTTTTCCTCTTTAACAACTGAGCTAATGT CGGCTCTTCAATACTATTCAAAAGGAATTTTCTATTCCTCTCCTGCTGTGTAAGCTAATTACCTTAGCAATTCTGCAATT AAACTAACTTCATCACCTAATTCCTTAACTAACTAATTATGTAAGCACTTTATCTGCTTTGTCTCCACAACTTTCGTTCT TGTATCCTCAGTCCTATACTCCTATGTTGTTCACTTCCTGCACAATAGAGTGGAGCCTTTCGTTCTTGTATCCTCAGTCC TATGATGTTCACTTCCCGAACAATAGAATGCAAACTTTCCCTAATTTCATCATATGATGTCCAAATAATATTATAAAAAC TTTATTCCATGTCTATAGCCAGTTATATACTGTAGTGTATACTTATACTTATGTGGTGATCTTCTTCCAGCTTGTGATTT TGTATCTTTGATGTTTTGTTAACTGATGCAAACTTCCATCTATGACACAGTTACCTCCAATATTTTGACTGACATGCATG TAAATGATCATGTATGTCAGTCAATGAAAAAGGAAAATATTTTAGGGTATCATGATCCGTTGATCCCCTTTTGGCAGACC TTGAGAAACTACTCTGTTTCTTTTCATTTATGAATGTTTATGTGACTCTTGTTTCTGTATCTGTAGCTTTCTATGATTCC CTCTGTTCTTGTGTTAAAATTTTAATAATGTTTAAGAACAAAAGTTATTCATACAACTATTAATTTGCTAGGCAGTAATT TTACAACCACTTGGAGATAAAGGAATTGCAATTATTGGTGGTGACACAATACGAGGTTTTACTACTTCTGATCAGGTACA TTTCAGCTTTCTTTCTCGTTTCCGTGAGACAAGTCAATTTGTCATGAAGCAAGCTTTCATTTCAGCTTTCAAGTCAACTT AGAACCCTAATTTTGAACTCTGTCATGCATATATTTGTGGGTTAATGATTGAAGTATTGAAATGATTACAGGCATGGATT ACATTCATAGGAGACAAGTTGGATTCTACCCTTGCAAAACATGTAAAGCATCTTCGTCTTACTTCCCCAGAATAAGTTTC AAAGATTTGCAAGGTAGCCTCTGATTGTTGTTAATTCCTGATTTCAGTGTAATAAATCCTAGAACCTTCAGCTGAGTTCT TCAGGATACGTTGTTCATATTAGTCCCATGTATGTATCTTTCATCCATTTCATATGGCAGTACTTAATACCAGACTAATT TATTGTTAAGAATAGTAAATTGTATAAATCAGCACATTTTTGTCAGACTATGTGCGAAATGTAATTGGTTTATTTTAGAA AATTGATTACTTTTGTCAGTTTTTTTTTGGTATTTGATGGTTCAGAAAACTGTGGCAGTTTCTCATAACAGATGACATTC TCGGAGTTCAAACTTGTGTCTTCACCCCCTCACAGGAATTTACCTTGCCTACTGCTAGACCAATACCTAAGTAGTTACTT TTGTCAGCTTTATGAGAAAATTAAGAAAAAAACAATTATTCCTGGAAAAATAATCCCAAAGAAACATGCCAGAGCTTCAG CTTCTAGTGGTTGACTTTACGTTTCAAACTGTAAGGTTCCTATTATCTCCCCCAAAAATTACTATTTATGTTTCTTGAAA CAAGGGTTAACATACGAAGCCTGAGGTCATGTACTCTCTCTTCCTTCCTACTGAAAAATCTAAACTATTATGTTGTGTGT TTGTGGCCTTTCCACAAAATCAATTTAATATAATACCTTGTCATGTTCTGACAGCTAAGAATTTGGTATTGACTTCCAGT TTACCATTGCTGCAACTTGTTTTAGTTTAGATTTGATTGGTAATGACGAGTTATAACTTCTGAGTAGGGGCCCAAATTAT TGTCAAATCTAAACCAAACCCCACTTTATCTTGGTCAAGGGGGCGCCAAAGGAATGAAGGAAGCAACTCCAACTTAGAAC AACCATATGCTGGAAAGAATATTATCATGCCTGTTCTAATTGAAAATCTAGGCTGTCAGCATGAATAATTTAGTCCTATT GGATGATGTAATCCTTTCATCCTTTGTAATAAACTTAACTAGTGTGAACTGTGATGTAAAAAATGGAAGGGAAATTCATT CATATTTCTGGAAATATACATCTGTATAAGCTCTGTGAGTCTGTTCTATATTCATATAATCATTTAGAAAACAAAAGAAA AACAAAAATTCTGTTACAAATATACCCCCCAAAAACTATGCAAAGAATGAATGCCTAACAAGTATGAATATCACATGCTT TACACGGGTACCAGCTACCAAGAAGTTAGCACCCTGATCAGTATCCATTAAAGAAAGACCTTTCCCAGGGCATCAACCCT GTTGCAGGATCAGCAAAATAAGACTGAAGGAAGTCCTTCAAGCCAGTATCCCAAACCTCACAAAACCTTAACCGCCAATT AGGTGGTTCAATTGCTTCGGTTCCTAGTCCCGGCGCTCTATCCTTTGATCCTTTGTTTTGGTCCTCGTGCCAGTCAACAA CATAGGTAGCAACTCTTCTGGAGAACTTGGCTTTGAATGTCTCCCATACCTGGTACTTGTAGTGGTTAATTATAGCAGAA CCTTCAGGCATGTCCCGGTACCTGAAACCCTCCCTCAGCTGAAAATGGTGTACCACATTCAGAAGACTGGCATCGAGCAA ATCCGGCCGCACGATGGATTTGTGCCTTTCAGGGCTCTGAAGCCGGCATGTGTACCCAGTAGTAACCCCTTGTTTAGGGG CTGAGTTCAACCCAGAAGGTCCAAAGCTATGGCAAGCTGTTCTTATCTCTGCAATGGATTTTGAATTCGAGTAATTGGCG ACCACCGATCTCAAAGAATTCTCACCAGGAACGCCCTGCCTAATCTGGCGATGAAACTCACGGGGGAAGTAGAAAAACTC ATCAACATCAAAGAACCCCACCCATTTGCACTCCTCTCTAGCCCTCAAAGCACAGTGGGAAAACCCTGCTTCTTGAGTCT TAATCCAAGGCCAAGCCTGTCTACTAACATTATACCCTTGAAGGTCAAGATCCTGAATCACCTTTTCAACATCATCATCA CTATTGTTATCATAGATAAACCAACGCTCCACTCCAAGCCACGCATGGTACATAATCCATTCCCTAAGAGCAGAAGCTTG GTTCCACACCATGGTACACACACACAGCTCATACTTATCTTTCCTCCTCCTCTGAACTCCATCACTGCCTGCAATTCTAG CCACAGAAGGAACAAGAGCACGAACCGGGTGCCTCACATTGCCACTCAAATGGCTAACCGTGACTCGAATCCCTCGAGCC TTACCCGGGTTACTCCTGATACTCTCCGGCAACAAGCACCTCACTACTTCTTGAGCCACCGAAACCGCTCTCGTGCTCAG CAAAAACGAACCGTCTTTGTGGAAATTCCTCACCCCGAAGTGGCACCGGAAATGGGTCGGATCCGAGATCTTATGGGGTC GCAGATTCAGCCCTTTCACAAACACCACCACCGTGTCCCCGTCCAGCCTCGCCTCGTAAGCCACCCTGTCCCAAGATTGA GCCGTCCGGTTCGTCAAAAAACCCAAACTCCGGCGACCCACCTCGCCTCTCCGCCGCAAGTCGACGACTACAGACCCTCC GGCGGCAGAGCGGTTCGTCCGGGGAAATGGGCACCTGGCAATGGATCGAGATTCGTCGTACCGGTCCGTTGACAGAACCG GCAGCACCTGAACATCAAGCACCACCGGTTCATGTGAACCGGTGGCGGAACCGTTGGGGAGGAGGGTGTAGTAGACGCAG TCTAGTTCGTGGGGTTGGTTTTTTTGTTGGTTGGCGAGGAAGATAAGGTAGTGGTCGGGGAAGAGGATGCGGTGTTGGAG TGTGAAGGAGGAGGAGGAGGTGGTGGTGGTGGTGAGAGGGTCAAGAATTGAGTGGCTGGCGGAGGAGTATAAGAGGGATA AGGTGGAGGCTGTAAGAGAGGGTCGGAAATTGTAGGAGGCGAAGAAGAAGAAGCTATGGTGATTAGACAAGAAGAGAAGG AAGATGAAGAAGGAGAAGCAAAGGAAAATTGTTCTTGATGAAATATGAAGGTGTCTCAGCCTCACCATCATCACTCTCTT CCTCTTCCTCCGTTGCTCAGTTTCCATCTTATGGTGGTGGAGGTTGGTGGTGATGATGGTGGAGAAGAAGTGGAAGAAGA AAAAATGTGTGAATGATTGAGGGAGGTTGAGATTTTGGGCATTTGGCAACTGGACGCGGAATGGACCAGTCGTCAAAGAG GAAAAGAAAACAAAAGAAAAGGGTAAGAAGGTTCTTTATCTCTCTTCTTCTTCTCTGTCTTTCTTTGTCTTTGCAGTGGA ATAATAATAATGTTAGAATTTTGCAAATTTAAATGCCAAAACTAGTGGAGATTCTGTAATAATTTTAGTCGTTGGGGACA CTGTTTAGAGGTTTTGTGTTCACCAGTGTTCAC
CDS sequence (LotjaGi2g1v0311900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCGGGAACTGCGTTCCGTGTCGTGGGTGTTGTCACTGTCAACACTCACATTCCCATTCCCATTTTCAAGAAATC CAAAACCACCGCATTCCAATCTCGCTTCTTCACTTGTTCATCTCCCTCTCCTTCTTCCACTAGTTACCGAGGTCCCAAAC CCAAACGCGATTTCCTCGCCGATTGGGTTTCCCAAAACGACGACGTCGTTCGCACCTTACCGATCTACGTCGGCTCCGCC TCCCTCTTCGCCGTCCTCTTCAATCGCGCCATTTCCGGCATCGCCCCCGTCGCCGACGCCGGCAGTTCACAATCCAGAGC TGACCTCTTGACTTTAGGATTGGCAGTCACCAATATTTTGGCTGGCCTTGTTTGGCTCTCCATAAGACCCAAATCTATAG CTGTGGTAAATCCTCAAGGGGTTCAATGCAGGAGGTTGTGCACTGCTCTCCCTCATGTTGCACTTACTGAGCTGCTCTGG GTATGGGAATCTCTATCAGATATCACCTGCTGCCGATCACTTGTTATTGTTTATGAGAGCAGTTGTGTACTTCAAATTGG TTTTGCTGCAGAGTCTTCTTCCGGGGATGGTGAGGCTGTAAGTGTGGACATTAATAAATTGATCCAAGGATCAGTATACC AGGGTGTAATGAAATCTGGAGCCCAGAGTTACTTGGCTAATCTATCTCTTTATCCTGGGAAATCTGAGCTGTCATTTCTA CCTTCAAATACTCAGGCAGTAATTTTACAACCACTTGGAGATAAAGGAATTGCAATTATTGGTGGTGACACAATACGAGG TTTTACTACTTCTGATCAGGCATGGATTACATTCATAGGAGACAAGTTGGATTCTACCCTTGCAAAACATGTAAAGCATC TTCGTCTTACTTCCCCAGAATAA
Protein sequence (LotjaGi2g1v0311900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAGTAFRVVGVVTVNTHIPIPIFKKSKTTAFQSRFFTCSSPSPSSTSYRGPKPKRDFLADWVSQNDDVVRTLPIYVGSA SLFAVLFNRAISGIAPVADAGSSQSRADLLTLGLAVTNILAGLVWLSIRPKSIAVVNPQGVQCRRLCTALPHVALTELLW VWESLSDITCCRSLVIVYESSCVLQIGFAAESSSGDGEAVSVDINKLIQGSVYQGVMKSGAQSYLANLSLYPGKSELSFL PSNTQAVILQPLGDKGIAIIGGDTIRGFTTSDQAWITFIGDKLDSTLAKHVKHLRLTSPE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 74 | 74 | - | – | |
| PANTHER | 1 | 295 | 295 | 1.3E-144 | – | |
| PANTHER | 1 | 295 | 295 | 1.3E-144 | – | |
| Pfam | 73 | 283 | 211 | 8.5E-59 | ||
| Phobius | 75 | 97 | 23 | - | – | |
| Phobius | 98 | 108 | 11 | - | – | |
| Phobius | 109 | 128 | 20 | - | – | |
| Phobius | 129 | 300 | 172 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0311900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…