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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0315600 |
| Transcript ID | LotjaGi2g1v0315600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methylsterol monooxygenase 2-1; TAIR: AT2G29390.2 sterol 4-alpha-methyl-oxidase 2-2; Swiss-Prot: sp|Q8VWZ8|SMO22_ARATH Methylsterol monooxygenase 2-2; TrEMBL-Plants: tr|I3T333|I3T333_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0315600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79112547..79115322) extracted from Lotus japonicus Gifu genome v1.2.
CACCACTGTCTCAATTCAATTGAAATTTGTCACACCCATTTCACTTCACTCCATTCCCTCTCAGTCTCAGAGTTCCATCA CCTATGGCTTCTTCTTCCTTCATCGAATCTGGTTGGCAGGTTCATTATCTTCCTCAAATTTCAACTCATCTTTGATTTCA CAATGTGCTTATTCTAATTCAATTCAGTAGAATCAATCAATCACATAGATTTGATCTTCATTTTTTGTGATTGATTTGCA TTTTGCATTGCAGTATTTGATCACGCATTTCACCGATTTTCAACTAGCGTGTTTGGGGAGTTTCTTTCTGCATGAAACCG TGTTCTTCTTGTCTGGACTTCCTTTCCTATGGCTTGAGAGAGTAGGGTGCTTCAGCAAGTTCAAGATTCAGGTTAATTTT GCTTCATGCAACTTTATGAATTCTTCAACCTTTCAATTTTTTTGATGTTCCAATGTTGTAGTTTTGTTTTCACAATTGAC ATTGTAGAATTAGCCATTAGGCATGTTCCCAGTTATTTGATTGAATGAAAAAGTAGAAAGAAAGAACATGGAAAATTGAT GTGATGACTAGAATTGAGTAGACTCCACATTAGGGTGAAAGAGATAGATTAGATGAGTTGAATTGAAATGAAAAGAGAAA ATTTTGACTTGGCCCATATCAATTTTTTTCTATGGTAGAGATTTCCCCTACGTTTCCTCTTCCTTGTCCATATGTTCTGC ATGCCAAAGATTTCAAAGAACGTGTTTTGGTGTTTGATTGTCTTGGCCAAACTTAAGGCTTATCATTTTTTATGTCTTTT TCTTTCTTGTCACTGTGTACAGAATAGTAGGATTTCAAGTAATCCCTTAAACTCACATGGCTATGTTGTGCCGTAATTGA ATATCGCATAGACTGAAATGCGGGGACCAAATAATAAATTTCTTATTTTTATGTGCACTATATAATCCAGGATTGGTGTG TACATGGCTAGGAATCGATTCCATAACTGAGAAGCTACTCTAAGCAGCTTCTGGTTTGACGAAATCTTTTTGCTGAACAT AGATGTTTAACGAGTTAACAAACTTAATGTTTGTAAAGTTAAGATTCACATTAGAGGGAAAAACGAGTAGTATCTATTGA TTGGAAAATCTAATATGCAAGATTTTCTAGTAAATGACTAAAGTTTTTCACTTGGTCTCTGAAGTGAATTCCTCACTTGA GAGGAGTTAAGCCGAATTATTTACTTCCAAAAACGGTTAACTATCTCGCATTGTTATGTAATAAAATTTTCCCATAGATT CCAATGTGATTCGGCTAGCATGCTGCTTACTTGTCCTCTTTCTCTTGGTTCATTTCCTTCATTTGAAACCTAGTCTGCTC AGTATGTTAAGATTTACTGCTTTCACTAATGCTTTCTTACGCAGGGGAAAAGTAATACTGCGGAAGCTCAGGAGAAATGC ATTATTCGCTTAATGCTGTACCATTTTGGTGTCAATCTACCAGTTATGATTTTTTCATACCCTGTGTTCAAATACATGGG TATGAGCAGTAGTCTTCCATTGCCATCCTGGTATGTTCTAGTTAAATGGAGCAATGTCATTAATTCTGGACATTTGAGCA AGATAGGAGCTATTTATGTTAACATTTCTAATATGTATTCCATTAAGCTTACGTGATAAGATTTTAATTTTGATGTTGCA GGAAAGTAGTTTTAACCCAAATAATTTTCTACTTCATCTTGGAGGATTTTATATTCTACTGGGGACACAGGATATTGCAC ACAAAATGGTTATACCAACATGTACACAGTGTTCACCATGAGTAAGATTTATATGTATTATGGGGTTGATTGTCATTTAT ACTTCTTAAGGTTTTGTTCAGAGCTCTAAAGGGTTGTGTTTGCCATTATTGTGAAGGTATGCTACACCGTTTGGACTTAC TTCTGAATATGCTCATCCTGCTGAGATACTATTCCTTGGATTTGCTACCATTGTTGGTCCTGCTATCACTGGGCCCCACT TGGTAACTCTCTGGTTATGGATGGTTCTGAGAGTCTTGGAGACTGTCGAGGCACATTGCGGTTACCATTTTCCTTGGAGT CCTTCAAACTTCTTCCCATTGTATGGGGGGTGAGTGTTAACTGTCAAGTTCCTTCTCCTTCTTGACCAGCCATTTTGTTT AACCATTATAGTGCTTCTTGTTAACATTTTCACCCTCACTTTCAGGGCTGATTTCCATGACTATCATCACCGTTTGCTGT ACACCAAGTCTGGAAACTACTCATCAACTTTCACTTACATGGACCGGTATGTATTGGCCATGTTTTGATAAATGCATATT TTGGTTAAAATCTGAAGCATTTAGAGGATGAAGATGTTCCCTTAGTAATACTGACAATAATGTGGCTTGTTGTTTTCATA TTAGGATATTTGGAACTGATATAGGGTACAGAAAGTTGAAAGCATTGAAGAGTGCAGCGGTTGAGGACAGTGGTGAGCAA AAGAATCAATGACATAGCATTTTTTTTGGAAATTTCCAGATAGACAGAATTTTGATATCCAATTTAAGGGCACAAGGAAA ATGTCTCGCCCTACCATTGTTGCCTTACTGTTTTTGTTTAATACATCTTGTAGTATACAGAGTGTGGTTCTTCAGACAAA TATAGGAATAATGTTGCTTTCATTGCTTCAAATTGAATGAACTTGTTTTGCTTTCAGTTATGGTTATTTCATGTGTTAGA TTTTAACTTCATATTTGTTGGCTATATGGTATTTTGTTGTTATGCCTCCAAGCAAG
CDS sequence (LotjaGi2g1v0315600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCTTCCTTCATCGAATCTGGTTGGCAGTATTTGATCACGCATTTCACCGATTTTCAACTAGCGTGTTTGGG GAGTTTCTTTCTGCATGAAACCGTGTTCTTCTTGTCTGGACTTCCTTTCCTATGGCTTGAGAGAGTAGGGTGCTTCAGCA AGTTCAAGATTCAGGGGAAAAGTAATACTGCGGAAGCTCAGGAGAAATGCATTATTCGCTTAATGCTGTACCATTTTGGT GTCAATCTACCAGTTATGATTTTTTCATACCCTGTGTTCAAATACATGGGTATGAGCAGTAGTCTTCCATTGCCATCCTG GAAAGTAGTTTTAACCCAAATAATTTTCTACTTCATCTTGGAGGATTTTATATTCTACTGGGGACACAGGATATTGCACA CAAAATGGTTATACCAACATGTACACAGTGTTCACCATGAGTATGCTACACCGTTTGGACTTACTTCTGAATATGCTCAT CCTGCTGAGATACTATTCCTTGGATTTGCTACCATTGTTGGTCCTGCTATCACTGGGCCCCACTTGGTAACTCTCTGGTT ATGGATGGTTCTGAGAGTCTTGGAGACTGTCGAGGCACATTGCGGTTACCATTTTCCTTGGAGTCCTTCAAACTTCTTCC CATTGTATGGGGGGGCTGATTTCCATGACTATCATCACCGTTTGCTGTACACCAAGTCTGGAAACTACTCATCAACTTTC ACTTACATGGACCGGATATTTGGAACTGATATAGGGTACAGAAAGTTGAAAGCATTGAAGAGTGCAGCGGTTGAGGACAG TGGTGAGCAAAAGAATCAATGA
Protein sequence (LotjaGi2g1v0315600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSFIESGWQYLITHFTDFQLACLGSFFLHETVFFLSGLPFLWLERVGCFSKFKIQGKSNTAEAQEKCIIRLMLYHFG VNLPVMIFSYPVFKYMGMSSSLPLPSWKVVLTQIIFYFILEDFIFYWGHRILHTKWLYQHVHSVHHEYATPFGLTSEYAH PAEILFLGFATIVGPAITGPHLVTLWLWMVLRVLETVEAHCGYHFPWSPSNFFPLYGGADFHDYHHRLLYTKSGNYSSTF TYMDRIFGTDIGYRKLKALKSAAVEDSGEQKNQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 12 | 261 | 250 | 1.9E-156 | – | |
| PANTHER | 12 | 261 | 250 | 1.9E-156 | – | |
| Phobius | 21 | 46 | 26 | - | – | |
| TMHMM | 24 | 46 | 23 | - | – | |
| Phobius | 47 | 69 | 23 | - | – | |
| Phobius | 70 | 90 | 21 | - | – | |
| TMHMM | 70 | 92 | 23 | - | – | |
| Phobius | 91 | 109 | 19 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 110 | 128 | 19 | - | – | |
| Pfam | 115 | 249 | 135 | 1.2E-29 | ||
| Phobius | 129 | 163 | 35 | - | – | |
| Phobius | 164 | 189 | 26 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 190 | 273 | 84 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Biological process | Lipid biosynthetic process | The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0315600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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