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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0315800 |
| Transcript ID | LotjaGi2g1v0315800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT1G60030.1 nucleobase-ascorbate transporter 7; Swiss-Prot: sp|Q0WPE9|NAT7_ARATH Nucleobase-ascorbate transporter 7; TrEMBL-Plants: tr|K7L9L6|K7L9L6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0315800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79123793..79127845) extracted from Lotus japonicus Gifu genome v1.2.
CAACCCTTGCATTTGCTGCATTGCATTACTCTCAAACGTTTCTGACAACAAGGTGTGTCACCTTTATCATGCTCAATGTC CTTTTATAAATTTCCTTCTCCCAAAAGAAAAGTGTTCATTTTCCTCGTCGTCTTGTTTTCCCTACTGTCTCTGTTATCAT CATTCTAGGTTTTGTTGAAACAAAAAACCTCAAAAGCTGTTAGAACTTTGTTGTTGTCCCCTTTTTGCTCTGTTGGGTTC TGAAATTTTTTGGGGTTTCGGTTGTTCTAGGTGCATTTGAAGAAGAATGGCAGGAGGAGGAGCTGCACCACCACCTAAGC AGGATGAGCTTCAGCCACACCCTGTGAAAGATCAGCTGCCAAATGTTTCATATTGCATCACAAGTCCCCCTCCATGGCGT GAGTTCACTGCTCCATTCAAACCATTTTTGAAACTTACCCTTTTTTCATGGTTGATTATCAGCAATAGTGTATTTTCTTC TGACTGAATCTAGAATTTTACTGTTAATCAATGAAGCGGAGGCTATACTGCTTGGTTTCCAACATTACTTGGTGATGCTT GGCACAACTGTTTTGATTCCCAGCGCTCTAGTTCCCCAGATGGGAGGAAGAAATGTAAGTTTTGACAAGGAAAGAGGAAA AGAAAAGGAAAATGATTTGCTATTATGTTGTGTGGTTTCCTATTTTCTAAGTCTGATAAATCTCTGAATTGTGGTTGTGG TTTAATAGGAAGAGAAAGCATTGGTGATTCAGACTCTGCTGTTCGTGGCTGGCATAAACACACTGTGCCAGACATCGTTT GGGACTCGTTTACCTGCAGTTATGGGAGCATCATATACCTATGTGCCAACTACCATTTCAATTATTTTGGCTGGTCGCTA CACGGACATTGTGGATCCTATAGAGGTTGGTTCTATCGAAGCTGCTTGTTTTTTTTTTTACTGCTTTTCCATTTTTGTTA TATCACCATCCTTGTTTAACTGATTTGTGGTAAAAAAATGCAGAAATTTGCGAGGATAATGCGTGGAACGCAGGGCGCGA TTATGATTGCTTCAGCCCTCCAGATTATTCTTGGCTTTAGTGGCCTGTGGCGAGTTGTAGTGAGGTTGGTTCATCTCAGG ATACTAAAAATAATTCCTTCTTCTTATCAGTCACAATGTGCTTTGTCAGATGTTAAGCAATGTTTTTTTTTCTTAAATTT ACTTGTATGGTTTAGGTCTAGTTCTTTTATAATGTGTACTATCCCCCTCTTCGTATGGTAACTCCCAATTAGTGATTATG AATTCTTGTGGAAATCAAATGCAATTACACTGATATATTGGATTTTACCTAATCTGAGAGCCATAACTCATTGCATTTGG TTAATAATTTGTTATATTTTTGTTTAGGTTCTTGAGCCCTCTCTCGGCTGTTCCCTTGGTTGCTCTGTCTGGCTTTGGAC TTTATGAGTTGGGCTTTCCTATGGTATGCATATTTGCAACAAGACTAGTGCTTATTTCTTTCCTAAGTTTATGAATTATA ATTGGTATCATTCACATTTCCCTGGTTATGTCTTTTGAATTCTAGCTTGCAAAATGTGTGGAGATTGGGCTACCACAAAT CATAATCCTACTAGCATTTTCACAGGTGATTTATAACTTCTGTGATGCTAAATTCGATTCTGAGTGCCTTACACCCACCT CGTATGAAATTTTGTTAACTCCAATTATCTTTTTCTTTGTTTCCTCAATTTTAATGTTATATTCTAAAGTAGTGGTGTTT CTTTGCACAGTACATTCCTCATCTGATGAAAGGAGATAAGCATATCTTTGATCGATTTGCAGTTATATTCTCAGTCGCAA TTGTGTGGCTTTATGCTTACATTCTCACCGTGGGTGGAGCTTATAAAAATGCAGAGCAGACAACTCAGGATACTTGCAGA ACTGACCGTGCTGGAATCATAGGTGCCGCACCATGGTAAGGGTCTTGTGGTTTTTCTAATAATAAGAATTATTTGTTCAT TATCTAGCTGTGTATTTCGGGGGACACAGTTGATGAAACTTGATATTTAGATCATCTTAGATGACAGTAAAAAAAGGATT CAATTTGGTTAACTCCCAAGTATTGCTGCTGACAAAATATATTAATCAGGATTAGAGTTCCATATCCTTTCCAATGGGGA ACTCCAACATTTCATGCTGGCGAGTGTTTTGCTATGATGGCTGCTTCATTTGTTGCTCTAGTTGAGGTTTGTTATTGTTA TGCTTGTAAAGTAGATATGAATTGCTGAATATGTGCAGTGAATTCTGAATTTTGTGCTTTCTCTAGAAGCTTATAGTCGT GATTAACATATTGTCCTCAATGTCCTGCAAGTTTTTGGGCTAGAATCTGCAATATTTTCCTAATTTTTTTAAAAATATAT AGAAAACTTGGAGTTGAGGCAGAAGTGACAATATATGTTTCTCAATAGTCTAGTAATTCCCTTTTTCTGAATTAACACAT GAATAACTAAGTGAGTCTCTCCTCAAAATATAGTATATTGAAGATATAAGGTGATATTTACAGATATAGTCACTTTTAAG AATTTTAATATGACTTCATCCAACTTGGTCTAGACAAATATTATGAAAAGTAGTATAATCGTGGGAGTGCATGATCCTCC TCAGTCCTCCCTTTCTTTCTTTCTCATTTCTATTCAGTTTGTTGCATGCTTATATAATGGCTCTTTCTCACATCATTTCA ATTTTCTACAGTCAACTGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCAGTGCCACCTTCGGTTCTTAGC CGTGGTGTTGGTTGGCAGGTAAATAGAATTTAGGAAATGAAATTATTTTTCTTTATGTGATTTCTAAATCATAAGATCCA ACATTTTAAAATTATTTCTGCAATGAAACATTAATGAATGTCAACATGAATACTGAGTTGCTGTTCATATTCAAGCCTTG TCGTTTTTCTTCTTGCGATAATTTTCTGCGATAATTTTGTTTTCTTATTGCTTGTGATCATCATTAACTAGTAGTCTTGT GAATCAGGGATTAGGAATTCTCATATCTGGGGCATTTGGGACAGGGAGTGCATCATCAGTTTCTGTGTAAGATTCTTGAT AAAAACTCCCATGTGCTGGGGATATAATTTTTCTTAATAAGAATAGTATACTTGAATCATTTATAAGAAACATTTTTTCT TTTCCCTAGAGAGAATGCTGGACTCTTAGCTTTGACACGAGTTGGTAGCCGAAGAGTTGTTCAAATATCAGCTGGATTCA TGATCTTTTTCTCCATACTCGGTAAGCTTATAAGACTGGTAATTCTGATGTTATTATTTTTCTCTCCTTGGTGAACCGAT GTACTTACTATGAAGTGGTTATATGCAGGAAAATTTGGAGCTGTGTTTGCTTCAATCCCTATGCCAATTGTTGCAGCTTT GTATTGCCTTTTCTTTGCCTATGTTGGTATGCATGATCAAATCAAGAATCTTCCATTCTCTTCTCATATTTTCCTTCAAG TTTGAGTATTCACCCCTTTTCTTCATTTGCTTTTTGTTTTCCTACAACACAGGTTCTGCAGGCCTCAGTTTCCTTCAGTT TTGCAATTTGAACAGCTTCAGAACTAAATTCATCTTGGGATTCTCCATTTTCATGGGCTTCTCTATACCACAATACTTCA AGGAGTACACAGCGCTAAAGCACTATGGTCCTGTACACACCCATGCTAGATGGGTATCCAGCTTCTCTTCTTAATCTTAT TGTTGAATGTGCATTCTTTTTTATATTAGTTGTTAAAACTTAGAAGAACTAATTCCATGTTCTCTTTTTGGCAGTTCAAT GACATGATCAATGTCCCTTTCTCATCAGAAGCATTTGTTGCTGGATCATTGGCACTGTTCTTGGATGCCACATTGCGCAA GAATGACAGCCAAACTCGTAAAGACAGAGGTGCGCACTGGTGGGACAGGTTCAGATCATACAAGACAGATACAAGAAGTG AGGAGTTTTACTCCCTACCCTTCAATCTTAACAAGTTCTTCCCTTCTGTGTGA
CDS sequence (LotjaGi2g1v0315800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGGCACAACTGTTTTGATTCCCAGCGCTCTAGTTCCCCAGATGGGAGGAAGAAATGAAGAGAAAGCATTGGTGAT TCAGACTCTGCTGTTCGTGGCTGGCATAAACACACTGTGCCAGACATCGTTTGGGACTCGTTTACCTGCAGTTATGGGAG CATCATATACCTATGTGCCAACTACCATTTCAATTATTTTGGCTGGTCGCTACACGGACATTGTGGATCCTATAGAGAAA TTTGCGAGGATAATGCGTGGAACGCAGGGCGCGATTATGATTGCTTCAGCCCTCCAGATTATTCTTGGCTTTAGTGGCCT GTGGCGAGTTGTAGTGAGGTTCTTGAGCCCTCTCTCGGCTGTTCCCTTGGTTGCTCTGTCTGGCTTTGGACTTTATGAGT TGGGCTTTCCTATGCTTGCAAAATGTGTGGAGATTGGGCTACCACAAATCATAATCCTACTAGCATTTTCACAGTACATT CCTCATCTGATGAAAGGAGATAAGCATATCTTTGATCGATTTGCAGTTATATTCTCAGTCGCAATTGTGTGGCTTTATGC TTACATTCTCACCGTGGGTGGAGCTTATAAAAATGCAGAGCAGACAACTCAGGATACTTGCAGAACTGACCGTGCTGGAA TCATAGGTGCCGCACCATGGATTAGAGTTCCATATCCTTTCCAATGGGGAACTCCAACATTTCATGCTGGCGAGTGTTTT GCTATGATGGCTGCTTCATTTGTTGCTCTAGTTGAGTCAACTGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAAC TCCAGTGCCACCTTCGGTTCTTAGCCGTGGTGTTGGTTGGCAGGGATTAGGAATTCTCATATCTGGGGCATTTGGGACAG GGAGTGCATCATCAGTTTCTGTAGAGAATGCTGGACTCTTAGCTTTGACACGAGTTGGTAGCCGAAGAGTTGTTCAAATA TCAGCTGGATTCATGATCTTTTTCTCCATACTCGGAAAATTTGGAGCTGTGTTTGCTTCAATCCCTATGCCAATTGTTGC AGCTTTGTATTGCCTTTTCTTTGCCTATGTTGGTTCTGCAGGCCTCAGTTTCCTTCAGTTTTGCAATTTGAACAGCTTCA GAACTAAATTCATCTTGGGATTCTCCATTTTCATGGGCTTCTCTATACCACAATACTTCAAGGAGTACACAGCGCTAAAG CACTATGGTCCTGTACACACCCATGCTAGATGGTTCAATGACATGATCAATGTCCCTTTCTCATCAGAAGCATTTGTTGC TGGATCATTGGCACTGTTCTTGGATGCCACATTGCGCAAGAATGACAGCCAAACTCGTAAAGACAGAGGTGCGCACTGGT GGGACAGGTTCAGATCATACAAGACAGATACAAGAAGTGAGGAGTTTTACTCCCTACCCTTCAATCTTAACAAGTTCTTC CCTTCTGTGTGA
Protein sequence (LotjaGi2g1v0315800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGTTVLIPSALVPQMGGRNEEKALVIQTLLFVAGINTLCQTSFGTRLPAVMGASYTYVPTTISIILAGRYTDIVDPIEK FARIMRGTQGAIMIASALQIILGFSGLWRVVVRFLSPLSAVPLVALSGFGLYELGFPMLAKCVEIGLPQIIILLAFSQYI PHLMKGDKHIFDRFAVIFSVAIVWLYAYILTVGGAYKNAEQTTQDTCRTDRAGIIGAAPWIRVPYPFQWGTPTFHAGECF AMMAASFVALVESTGAFIAVSRYASATPVPPSVLSRGVGWQGLGILISGAFGTGSASSVSVENAGLLALTRVGSRRVVQI SAGFMIFFSILGKFGAVFASIPMPIVAALYCLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSIFMGFSIPQYFKEYTALK HYGPVHTHARWFNDMINVPFSSEAFVAGSLALFLDATLRKNDSQTRKDRGAHWWDRFRSYKTDTRSEEFYSLPFNLNKFF PSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 394 | 394 | 3.3E-61 | ||
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 483 | 483 | 3.5E-301 | – | |
| PANTHER | 1 | 483 | 483 | 3.5E-301 | – | |
| Phobius | 24 | 44 | 21 | - | – | |
| Phobius | 45 | 49 | 5 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 50 | 69 | 20 | - | – | |
| Phobius | 70 | 89 | 20 | - | – | |
| TMHMM | 90 | 112 | 23 | - | – | |
| Phobius | 90 | 108 | 19 | - | – | |
| Phobius | 109 | 113 | 5 | - | – | |
| Phobius | 114 | 134 | 21 | - | – | |
| TMHMM | 118 | 140 | 23 | - | – | |
| Phobius | 135 | 145 | 11 | - | – | |
| TMHMM | 145 | 164 | 20 | - | – | |
| Phobius | 146 | 164 | 19 | - | – | |
| Phobius | 165 | 169 | 5 | - | – | |
| Phobius | 170 | 189 | 20 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 190 | 238 | 49 | - | – | |
| Phobius | 239 | 260 | 22 | - | – | |
| Phobius | 261 | 279 | 19 | - | – | |
| Phobius | 280 | 301 | 22 | - | – | |
| Phobius | 302 | 321 | 20 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 322 | 341 | 20 | - | – | |
| Phobius | 342 | 346 | 5 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 347 | 365 | 19 | - | – | |
| Phobius | 366 | 376 | 11 | - | – | |
| Phobius | 377 | 393 | 17 | - | – | |
| TMHMM | 377 | 393 | 17 | - | – | |
| Phobius | 394 | 419 | 26 | - | – | |
| TMHMM | 416 | 438 | 23 | - | – | |
| Phobius | 420 | 438 | 19 | - | – | |
| Phobius | 439 | 483 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0315800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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