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LotjaGi2g1v0318700.2

Overview

Field Value
Gene ID LotjaGi2g1v0318700
Transcript ID LotjaGi2g1v0318700.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Trehalose-6-phosphate synthase, putative; TAIR: AT1G23870.1 trehalose-phosphatase/synthase 9; Swiss-Prot: sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 9; TrEMBL-Plants: tr|A0A151TGL2|A0A151TGL2_CAJCA Putative alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 9; Found in the gene: LotjaGi2g1v0318700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:79358251..79361040) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCATCACGATCATATGCTAATCTATTAGACTTAGGTGGAGGTTTTTTGGATTCTCCTCGGACCGCAAGAGCTATTCC AAGGACTATGACGGTTCCTGGAGTTATTTCTGACCTGGATGCTAATGGCAGATGTGATGGGGATTCAGATGTTAGCTCTT CTGGTTACAGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATATAGAAACTGGCAAATGG TGTTTCAATTTGGACAAGGATTCAATTTTGTTGCAGTTAAAAGATGGTTTCTCTTCTGACACTGAGGTGCTCTATGTTGG ATCCCTCAAGGTTGACATAGATGCTGGTGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGACTTCAATTGCATACCTA CCTTTCTACCACATGATCTCCAGAAAAAGTTTTATCTTGGCTTTTGCAAGCAGCAGCTGTGGCCTCTGTTTCATTACATG CTACCTATGTGTGCTGATCACGGAGACCGGTTTGACCGCTTGCTTTGGCAGGCTTACGTTTCTGCAAACAAAATATTTGC AGACAAGGTTATGGAGATAATAAATCCTGATGATGATTATGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCTACAT TCCTAAGGAAGCGGTACAATCGAGTTAAACTTGGTTTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACT TTGCCTGTCAGGGATGAAATTCTGAGGGGATTGTTGAATTCTGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCA CTTCCTCTCTTGCTGCAGTAGAATGTTGGGTCTGGACTATCAATCTAAGAGAGGACATATAGGACTAGATTACTATGGGC GTACTATATTCATCAAAATTTTGCCTGTGGGCATACACATGGGTAGGCTTGAGTCTGTATTAAATCTTCATTCTACGGCC GCTAAAATGAAAGAGATTCAGGAAGAGTTCAAGGACAGGAAGGTGATTCTTGGTGTTGATGACATGGATATTTTTAAAGG CCTCAATCTGAAGCTTCTAGCTGTTGAGCAGCTGCTCCAGCGAAATCTACATTTGCAAGGCAAGGCTGTCCTAGTTCAGA TTGTGAATCCTGCTAGGGGTTCAGGGAAGGATGTTCTCGAAGCAAAGAAAGAAACATATCTAATTGCCCGGAGGATTAAT GATACTTATGGTTCAAACCATTATCGACCAGTTATTCTCATTGACCATCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTA TGCTGTGGCTGAATGCTGCATTGTCAATGCGGTGAGGGACGGCATGAACTTAGTCCCATACAAATACATTGTCTGCAGAC AAGGAACTGCACAGCTTGATAAAGCTTTGAATAGAAAGAGTGATTCTCCTCGTACGAGCATGCTTGTTGTGTCTGAGTTT ATTGGCTGTTCTCCTTCTCTAAGTGGAGCAATCAGGGTCAATCCCTGGGACATAGATGCTGTGGCTGACGCTCTGTATTC AGCCATTACTATGAGTGATTCAGAGAAGCAATTGAGGCATGAGAAACACTACCGATATGTCAGTTCTCATGACATGGCAT ATTGGGCCCGCAGCTTTGTGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATGGGTTTG GGCCTAGGGTTTAGAGTTGTTTCTCTTTCTCATGGTTTTAGGAAATTGTCTGTTGACCACATTGTTTCAGCATACAAAAG AACCAGTAGAAGAGCCATATTTCTTGATTATGATGGTACTGTTGTACCACAATCTTCTTTAAATAAAATCCCCAGCCCTG AAGTCATATCCGTGCTTAATGATCTGTGTAATGATACTAAAAATACTGTGTTCATTGTGAGTGGGAGGGGAAGAGATTCT TTAAGTGATTGGTTTTCTTCATGCAAAATGATTGGGCTTGCAGCTGAACATGGATACTTTTTAAGGTGTGTACTTAAGTG TTAGGAAGATTAGGCACCATTTACTCCCCCCCCCCCCTTCTCCCAAAATATTAAGTTTGTCTTCTTTTTTTATGGTCGTA GGTGGAGTAAAAATTCCGAATGGGAGGCTAGTCACTTGTCTGCTGATCTTGAATGGAAGAGGATTGTGGAACCTGTCATG CAGTTGTATACGGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGA CCCCGATTTTGGCTGTTGCCAAGCCAAAGAATTGTTGAATCATCTGGAAAGTGTGCTTGCTAATGAACCTGCAGTTGTTA CGAGGGGCCAGCATATTGTTGAAGTCAAGCCACAGGTACAATTCTTTAAACTTCTCCCTATCCTCTCCCTATCCTCTCCC TCTGTTAATATTCATGCAAAAGAAGCTGGATTGAATTTGTTAAAATCTTGTTTTTCCTCTCTGCAGGGAATAAGCAAGGG TTTGGTAGCTGAAAACATTCTCTCCACTATGGTTGATAATGGTAATCCACCAGATTTTGTGATGTGCATTGGAGATGATA TTTCTGATGAAGACATGTTTGAGAGCATATTGAGGACAGTCTCATCCCCGTCATTGCCAGTAGCTCCCGAAATCTTTGCT TGCACTGTTGGTCAGAAACCTAGCAAGGCCAAGTATTATCTTGATGATCCTTCTGATGTCATGAAGTTGCTTCAAAGCCT TAGTACTTCATCTAATCCAAGACCCAGGCATCTAGCCCAATTCCAAGTTTCTTTTGAGAGCACAGTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0318700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATCACGATCATATGCTAATCTATTAGACTTAGGTGGAGGTTTTTTGGATTCTCCTCGGACCGCAAGAGCTATTCC AAGGACTATGACGGTTCCTGGAGTTATTTCTGACCTGGATGCTAATGGCAGATGTGATGGGGATTCAGATGTTAGCTCTT CTGGTTACAGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATATAGAAACTGGCAAATGG TGTTTCAATTTGGACAAGGATTCAATTTTGTTGCAGTTAAAAGATGGTTTCTCTTCTGACACTGAGGTGCTCTATGTTGG ATCCCTCAAGGTTGACATAGATGCTGGTGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGACTTCAATTGCATACCTA CCTTTCTACCACATGATCTCCAGAAAAAGTTTTATCTTGGCTTTTGCAAGCAGCAGCTGTGGCCTCTGTTTCATTACATG CTACCTATGTGTGCTGATCACGGAGACCGGTTTGACCGCTTGCTTTGGCAGGCTTACGTTTCTGCAAACAAAATATTTGC AGACAAGGTTATGGAGATAATAAATCCTGATGATGATTATGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCTACAT TCCTAAGGAAGCGGTACAATCGAGTTAAACTTGGTTTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACT TTGCCTGTCAGGGATGAAATTCTGAGGGGATTGTTGAATTCTGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCA CTTCCTCTCTTGCTGCAGTAGAATGTTGGGTCTGGACTATCAATCTAAGAGAGGACATATAGGACTAGATTACTATGGGC GTACTATATTCATCAAAATTTTGCCTGTGGGCATACACATGGGTAGGCTTGAGTCTGTATTAAATCTTCATTCTACGGCC GCTAAAATGAAAGAGATTCAGGAAGAGTTCAAGGACAGGAAGGTGATTCTTGGTGTTGATGACATGGATATTTTTAAAGG CCTCAATCTGAAGCTTCTAGCTGTTGAGCAGCTGCTCCAGCGAAATCTACATTTGCAAGGCAAGGCTGTCCTAGTTCAGA TTGTGAATCCTGCTAGGGGTTCAGGGAAGGATGTTCTCGAAGCAAAGAAAGAAACATATCTAATTGCCCGGAGGATTAAT GATACTTATGGTTCAAACCATTATCGACCAGTTATTCTCATTGACCATCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTA TGCTGTGGCTGAATGCTGCATTGTCAATGCGGTGAGGGACGGCATGAACTTAGTCCCATACAAATACATTGTCTGCAGAC AAGGAACTGCACAGCTTGATAAAGCTTTGAATAGAAAGAGTGATTCTCCTCGTACGAGCATGCTTGTTGTGTCTGAGTTT ATTGGCTGTTCTCCTTCTCTAAGTGGAGCAATCAGGGTCAATCCCTGGGACATAGATGCTGTGGCTGACGCTCTGTATTC AGCCATTACTATGAGTGATTCAGAGAAGCAATTGAGGCATGAGAAACACTACCGATATGTCAGTTCTCATGACATGGCAT ATTGGGCCCGCAGCTTTGTGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATGGGTTTG GGCCTAGGGTTTAGAGTTGTTTCTCTTTCTCATGGTTTTAGGAAATTGTCTGTTGACCACATTGTTTCAGCATACAAAAG AACCAGTAGAAGAGCCATATTTCTTGATTATGATGGTACTGTTGTACCACAATCTTCTTTAAATAAAATCCCCAGCCCTG AAGTCATATCCGTGCTTAATGATCTGTGTAATGATACTAAAAATACTGTGTTCATTGTGAGTGGGAGGGGAAGAGATTCT TTAAGTGATTGGTTTTCTTCATGCAAAATGATTGGGCTTGCAGCTGAACATGGATACTTTTTAAGGTGGAGTAAAAATTC CGAATGGGAGGCTAGTCACTTGTCTGCTGATCTTGAATGGAAGAGGATTGTGGAACCTGTCATGCAGTTGTATACGGAAG CAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCCGATTTTGGCTGT TGCCAAGCCAAAGAATTGTTGAATCATCTGGAAAGTGTGCTTGCTAATGAACCTGCAGTTGTTACGAGGGGCCAGCATAT TGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTGGTAGCTGAAAACATTCTCTCCACTATGGTTGATAATGGTAATC CACCAGATTTTGTGATGTGCATTGGAGATGATATTTCTGATGAAGACATGTTTGAGAGCATATTGAGGACAGTCTCATCC CCGTCATTGCCAGTAGCTCCCGAAATCTTTGCTTGCACTGTTGGTCAGAAACCTAGCAAGGCCAAGTATTATCTTGATGA TCCTTCTGATGTCATGAAGTTGCTTCAAAGCCTTAGTACTTCATCTAATCCAAGACCCAGGCATCTAGCCCAATTCCAAG TTTCTTTTGAGAGCACAGTTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0318700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASRSYANLLDLGGGFLDSPRTARAIPRTMTVPGVISDLDANGRCDGDSDVSSSGYRERKIIVANMLPLQAKRDIETGKW CFNLDKDSILLQLKDGFSSDTEVLYVGSLKVDIDAGEQEEVAQKLLEDFNCIPTFLPHDLQKKFYLGFCKQQLWPLFHYM LPMCADHGDRFDRLLWQAYVSANKIFADKVMEIINPDDDYVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRT LPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYQSKRGHIGLDYYGRTIFIKILPVGIHMGRLESVLNLHSTA AKMKEIQEEFKDRKVILGVDDMDIFKGLNLKLLAVEQLLQRNLHLQGKAVLVQIVNPARGSGKDVLEAKKETYLIARRIN DTYGSNHYRPVILIDHPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAQLDKALNRKSDSPRTSMLVVSEF IGCSPSLSGAIRVNPWDIDAVADALYSAITMSDSEKQLRHEKHYRYVSSHDMAYWARSFVQDLERACKDHYTKRCWGMGL GLGFRVVSLSHGFRKLSVDHIVSAYKRTSRRAIFLDYDGTVVPQSSLNKIPSPEVISVLNDLCNDTKNTVFIVSGRGRDS LSDWFSSCKMIGLAAEHGYFLRWSKNSEWEASHLSADLEWKRIVEPVMQLYTEATDGSNIEIKESALVWHHQDADPDFGC CQAKELLNHLESVLANEPAVVTRGQHIVEVKPQGISKGLVAENILSTMVDNGNPPDFVMCIGDDISDEDMFESILRTVSS PSLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSLSTSSNPRPRHLAQFQVSFESTV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10788
30 844 815 0.0 –
PANTHER
PTHR10788:SF92
30 844 815 0.0 –
Gene3D
G3DSA:3.40.50.2000
52 317 266 8.9E-74 –
Pfam
PF00982
59 544 486 3.7E-185
IPR001830
CDD
cd03788
59 544 486 0.0 –
SUPERFAMILY
SSF53756
59 548 490 1.61E-145 –
Gene3D
G3DSA:3.40.50.2000
318 529 212 9.3E-72 –
TIGRFAM
TIGR00685
589 838 250 5.6E-38
IPR003337
Gene3D
G3DSA:3.40.50.1000
590 697 108 2.3E-15
IPR023214
SUPERFAMILY
SSF56784
591 838 248 3.67E-48
IPR036412
CDD
cd01627
592 833 242 6.37725E-75 –
TIGRFAM
TIGR01484
592 794 203 1.1E-17
IPR006379
Pfam
PF02358
594 829 236 1.1E-79
IPR003337
Gene3D
G3DSA:3.40.50.1000
720 849 130 1.5E-20
IPR023214

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0005992
Biological process Trehalose biosynthetic process The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0318700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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