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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0320400 |
| Transcript ID | LotjaGi2g1v0320400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carbonic anhydrase; TAIR: AT5G14740.2 carbonic anhydrase 2; Swiss-Prot: sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic; TrEMBL-Plants: tr|I3T6E8|I3T6E8_LOTJA Carbonic anhydrase; Found in the gene: LotjaGi2g1v0320400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79547740..79554993) extracted from Lotus japonicus Gifu genome v1.2.
GTGGTTGTGGTGGCGGCGACGGTGGTGGTGGTAGTGATGGAGGCGGTGGTGGTGGATGGTGATTGTGGTGGCAGTGACAA TGGTGGTGGTGCCGACGACGGTGGTGGCGGCAGTGACGGTGGTGGTGGAGGGTATTGTGATGGCAGTTGATTCAATATAT TGAAGTAGTTTATGCATTGTACTTTTATCATGCCTTATCCATCATCTATATGGTGGATTAAATAATTCATCATTTTGATG TATAAGAGGAGATTGATGTATAAACTTATACAATACAATATGAGCACTAAACAATGAATAAATTCATAATATATTGTATA AGCTTTATACTATCATGCCTAATACAGTTTACCAAATGTGCCCTATGGTTCAAAAACATTTTCAGTTGCTATGACTAGAA TGAATTTTATTGCCCATTGAAGCATCGAAATGGCTAATCGCATGCTAATTGTCCCACTGATCTCTTATGGTATTGCTTGT TTTCGTTTCATTAAGTCAACCTTCCCAATAAACTATTACTTCAGTGAGCATCTATTCATTCACGAACAAAAAGAAAAAGT CAATTCCTCATCACACCCGCCATCCCAGAACGTCATCTACCACGCTTATTATTTTGGGGACAATAAAACCCCACCCACCA GATTCCACTTTCTACAGTTTTCTAATTCAATAATGCTCTAATTAACCCCCATAAACGCAGCTGAAGCAGCAGGTGATTAA CAAATCTTATCTTACACAGTTGTTTATTCTTTACATTATTTTACAGCACTAATTGGCTTGGTATACTACTTTAGAAAAAT AAGAAAATGCACATATTAAAAATTTTAATTAATTTATTGAAATTATTTTATAAACTTTAGATTGTAACCTTTAAGCCTTT GATTAAATTAATAGTGATTGAGAAAGAGTTGTGTGTTTGATTTCTTCCTTTGATGTGAGGATTGTGTTGAGTAATAGGTT AGAGGAGGGATATTGTTGGATAATAATAGTCATTGTTAATTCTGGTACCAATTGATAAAATGATGCTTCCTATCAAAGTC AGTACGGCTAGGTTAGAGAATCAAAATTATAAAGCAATACTCAATTCTGATATCATTAATTGGAAAAAGAATTACAACTT ATACCAGAAAAATAAGCAACAAAAAGGTTAAAAATCTAGTCTAATTATGAAAGAAATAAAAACCATCATAACTATAACTA ATATAATCATAAAATAACTGGATATAGTACTAAAATAACTAGATAAAATATGTTTAAAAAATCTAAACGTAATTAGACAT TCATTTAGCTTTTGTTGAAGGACTATCAAATGATTTGTATACCACTATATTTTCTTGTTAGACACTCAGGCATTTGCAAT CTGTGACAGTTTTTGCAGTAATTTATTTATTTCAATTTACTCCATTTATCTGCCACAAATTATAGATATTTAGTGTCGGC AAGAAATTGGGGGACGAAATCGTTTTGAAATTTTCTTGTAAATTATCAGCTGCTAATAAATGGAATATAAATATACGTTA CGAAAACAAGAATGATTTCATTTTATTGTGACCGTTTACTAATAATAGTAATGACCATTATAGAATAATTAATTTCCGAA AAACAACAATGAAGTCTGTCAATTCTTAATGTCATCTGATCCTGGACTCAAATATAAAAATATTCTTCCAAGGTAGGTCG AAACTGAAATAATCCTGGAAGCCTTATCTTTTTTATATTAATTTCATATCATTTGTACATCCCTATGCACACATCATATA TTTTTGTTCTCTTCCTCATTTTATATAGAACAATAAAAAATTGTAATGAAATAATTTTCTATAGAAGCGCGTTAAGTGGC ACCCTAAACGCTGAGTCCTTGTTCCCCTTTGTGGTCTATAGGATTTATTTACCGCGTCAAAACTCAGTCACACAGTCTCC CTCTATATAAACACAATCATCTGCTTCACCCTTTTTACGCCCAATCAATCTCGATCACACACACACAGGAAACCTAAACA AACAACAAACAAAAACAGGTTCGTATAGATTCAAATTCCACCTTCTTCTCTGCTTCCTCCACAAGATTCAGATCATGCAA CACTATTCAATTTAATTTCACTGTTTCTGAATCTCACTCTTTGATTCATCATGATTAATCATTTCACTAATTTGGATGAA AACAGAAGGAAGAAATGGCAGGAGAATCATACGATGAAGCAATCGCATCGCTGACCAAGCTTCTCAGGTAACAAAATCAA TCGCTGCTACCTGCGGTGATTCAGAAAAAAACGCTGCTGCTGTTGTACGATGTCGTATTGGTCACGTGGGCCCCACTCGC ACCTCGTCTACGCGTTGGTTTCCGTGCAATGTGAATAACCGTTTTCTGTTTTTCCTGCAGCGAGAAAGCTGACCTCGGGG CGGTCGCCGCCGCAAAGATCAAGGACCTCACGGCGGAGTTAGAAGACGCCGGTTCGAAGCCGTTCAACCCGGATGAGAGG ATCCGAACCGGGTTCGTCCAATTCAAGAGCGAGAAATTTGAGTACGTTAACAACCTTTTCACCTTCCCTTGTCTTAATTT CTACCTAGGAAGACACAATTAGGAAGCTTCTTTTCTTCTTTTCACATGTTTTGGTTTTTTTTTTTGTCTTATAGCTTAAA AAATGATTGATAACTGGTATGGCAATGGAATTTACAGTTTTACTGAGACCGGTTATCATTGTTGTTGGTTTTGTTTTGTG ATATCTTTTCAGGAAGAATCCAGATCTGTACGGTGAACTTGCCAAAGGCCAGAGCCCAAAGGTCAGCCATATCCACTGTT TAGTTAATTCATTTCCCCCCACATTGTTGGGTGGATTATTGGTTTGTGATGAAATGATTGAATTTGATTAAGCTCTGATT AAAAAACCAAAATTATGCAGGGAACAACTATTTTCAGATTGATAATAAAGTCTTCTGTCCCCATTATTGTTTAATTTAAT CCACATGTTCATGTCAGTCTAACTGTGAACTAATTTTTTTTTTTTTTGTTCAAAACTGTGAACTAATCCTAATCAACTAT TTATGTTAGTTACATACCATGCGCATGTAAAAATGGGCCCTGAATCGTTTAATTACTGTTCATGGTCTTTCCATGTTTTT TTTTTTTCGATGAATAATATCTTATCTGCTAAGAAGTCAGCTGAGTGTGCATGCTTACTCTTAATTTTCTTATGTATTTG TGTGTTGTTGATAACACTCTTAGAAAATTTTCTCACATGTTGTAAGTATCATTTGACAAACCTTTGAGTTTAAATTTCAT ATATCTTTGAATTTTGACAAAAAAGTTTATGTAAGTTCGGCTATAAATTCCACCATAAGGATATAGATTGATCATATATA TATATAGGTATTTAAAAATCGTCCACATATATAATACTCGCATAGACAATAAAAACCTAACACACAACCTTTTGAAAAAA ACGATATCTTCTTTAGACATTAGGTTTTCAATGCTTCTTAACATTACTTGCTACCGTATGATCTGTCCTACTAGTTTTTT TGTGATTTTATAATTAAGGCATCTTGGACTTCCTTATAGAGACATTAGTCTTTCCATGTTTCTTAACATTACTACTATAT GATCTGTCATACTAGTATTTTTTTATCTTATAATTAAAGCATCTAGGACTTTTGGTATATGTTTTAAAATTATCTTCGTA GCAATTTTATAATATTTGAACTATAATGGTCTATTAAGATTACGCTCAATGTTCATATTAAAATATTGCCACTAACCATT ACTATATTGGTGTATTGGACACATGGCAGTTTTTGGTATTTGCATGTTCAGACTCAAGAGTTTGCCCATCCCATATTCTG AATTTTCAACCGGGTGAAGCCTTCATGGTCCGCAACATCGCCAACATGGTTCCACCATTTGACAAGGTTTATTTTTCTTG AAATGAGCAAAAAGTCTATAAAATTTGTTCGAAGTCATCATCCTTCTGGGGTTTCAAACACGTACAAAAGTTTGACTGAA CCTTTTATTATTGCAGACAAAGTATTCGGGAGCAGGGGCGGCCATTGAATATGCAGTACTGCATTTAAAGGTAAATTGTG GCTCAATATGCTCTCTCTTTTTTTCATAGTTTCTCAACCATAAAATTTCCTATAATAATGCTCTGTATATAGTGGATCAC GTGGAAAGGGAGAAAGTTTGGTGGTGGAGAGACCATTTGTTATGTTTTGCATCATCATTTATTGGGATCCACACGCAACT CATGTTGCATAGCTATTCTATTTCATCAAAACTCTAGTACTATTCATTCACGGAAATGAAACCAAAAAGCTTAAGGATTT TTTAAATGAATGCACATCGCTCATAAAAGCAAAGAATGATCAAGCATTTTACCACAAGTTAATTCCCACTGCTTTCTTTT TTTAGTTTAATTTCTATGTACCGACGATGTAAAGTTTTTTTACATCGTTAACTAATCAGATTTCAAAGATATGAGAAAAT CTCTCTTTGAATTCAATTTCCTTAATTAACGTGGCACATCCTTGAAACCTGATTGGTTGACAGTGTAAAAAAACTTTGCA CCGTCGGTGCATCATCCTTTTTCTCTTTTTTTTGGTGTATTTTTTTTTTCAAAAAATGATTGTATTCTTATCTATTCATT GTTTCAAAAGTTGAAGATAAAATTATGTTATTTTATTAACTAATATTTAATATATAGTTAAATTAATTAGGATTAGATTT TAGGGATGTACCGCATCAACTAATTAAATTAAAAATAATAATTTTTTAATATTTAAAATTTAATTTGTTGATTGTGTAAA AATCTTTTACAATATTAAAAATTATTCTATAAAAGTTTCGGTGGAAAGAAAAAATCATAAATTAACCCAACACCTACCCT TCTATCCACCATACATCCCCCCTATAATCATTAGGAATATAAATTACGTATGCTCACTCGTTTATCCATAAGAAATAAAG TATACCAATCAGATTTTAAGGATGTGGGAAAATCTCTCTTTTCATTTAATTTCTTTAATTGACATGTCACATCATTGAAA TCTGATTGGTTGACGGTGTAAAAAAACTTTACACCGTCGGTGCATCAAAATTAAACTCATATTTTAATAGACAAAACATT ACCATGGAAATGAGTTTAATTATCGTATCAAAAAAGAGAAAAAAAGAAAAGAAAAAAAAGAGTTTAATTAAGCTAGACCT AACTATGAATTTTTTTCATTATCTACCATCATATTCAACACATTAATTTTAATTTATCAATATACAAACTTTCATTCATG AGAATTCAGAAGGTAATTTGTTTTTTAATTTGAGTATGAATAATAAAGCAGCTCAAATGACTGGAAAACATTTTCTAACA TCTAATTTAAAATTGGTTCATATATATTCCTCATAATTTGAAGAGATTGGCTAAATGAGTGGTGGTAGTCGCATAATGAA GCAAACGCCTTTTGTTTGGAACTACAATAGCATTTTTCTGCTTTTTTTTCATCTTCTTTAGGATATGCCTTACAGGTGGA GAATATTGTAGTTATTGGACATAGCTGCTGTGGAGGAATAAAGGGGCTCATGTCTATCCCAGACGATGGGACCCCTGCAA GGTAAGTCTACCTTATTATTACTGTTTAGATCTATTAAAAGTTGATAAAGGGATCAACAATTTTGCCAAAAGGACAAGTA CTGAAAGAGCATATGATGAAAATTAATTTACACTATCATGATAGCTTTTCAGGACTTCCAAGTATGTAGGTGATTCACAG ATCCCCTTTTCACCACAATGTTCTTCAGATTCATCATTCACATTTATTAATAATAGTGATTAGTGAATATAAAGTCATAA ACAACATTAATTCTTTCCTGTTTGTTCCACCTCATTGGAGACAACAGGAAATCTTAACAAATCAAGAGGAACAACCTTTT CAGAGATGTTGCTTTGGGCATATACCCAGAATTAACAAATTAATTAGTCTTTTTCCCAGCATATAATAATACAGAGCAAT TAGTGAACTATTTACTACTATTTTAATGCTCCCCTGTCTTTACTATTTTAAAGTGTAGTGCTAGCTACTTAGTCAATGGA CTCTTGTATACAGATTCCACTTATCAATATTATAATATTATATAGTGATTTTCATGAACTGTATTCTTCTGCTTATCATT TTAAAAATCACTTCCTTCCTCCGTGATCTTACAGTGACTTCATAGAGCAATGGGTCCAAATATGCAACCCAGCAAAGTCC AAGGTTAAAACGGATACAGGCAGCTTAAGTTTCTCAGAACAGTGTACTAACTGTGAGAAGGCAAGTAACTGACACTTTAA CCTTATAACACAAGGTCATGGGAAAAACATTTTATTTTGTGGGTTTAATTTGTTTAATGCTCAGCTATATGGTGCATCAA TATACATAACCTATGTGAGCAAAGAGAGCTTAAATTCATTGGTATTGGATTTAGTCTTTTATAAATTGTTATTCTGCTTT GTAATCTAATATTTTGCTTGTTCACTCCTGTGTAGGAAGCTGTGAATGTCTCACTAGGAAACCTATTGACTTATCCATTT GTGAAAGAAAGAGTTCTAGACAAAACGCTTGCATTGAAAGGAGCACATTACAATTTTGTTACTGGCAATTTTGAGCTGTG GGATCTGAACTTCAAAGTTCAGCCTTCTATATCCGTTTAAGATCTCTCTCCAGCCCCAAGTAAACGTACATACATGATGA TGTACATCGCTTTGCAAAGTATGTTGTCAGTACACTGAGAAAGAATGAAGCAGGCATTCAGCAAAAATAAGGCCTGCAGT GAGCAAGCAGCAATAACTTAATTAGTTTTGTTTTGGATCATTCTCATTTCTATGTTGTGTACACAGTGTTGTTAATTTAT CTTACTTTCATTTTCATTTTGCTGATATATTAATGATATGATCCCAAGTTAGCACATAGCCGCGCCTTTCTACGTACATC TTATTTTCTATTAATATACAGTGACTGAGTGACCCTTGCTCAATTCAGCACACGCGGATCTTTATAAATCTGAACAGAGA TTTTGATCATGTTCAGTTGAGTTTCCAAATCTTAAAATGAACATCACCAAAGCAATTAAGTTTATGGTTTATGGTATGGG AACATCACCCCAAGCAATTAGGTTCATAGACTCCAAAGTTCATACATATTATGAGAGTAATGGAGTGACTAGTGAGAGTA GTATATCTTGGCATGGTGATGAGAAAAATAAAGGATGAAGGTGAAGTGCAAAAG
CDS sequence (LotjaGi2g1v0320400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGAATCATACGATGAAGCAATCGCATCGCTGACCAAGCTTCTCAGCGAGAAAGCTGACCTCGGGGCGGTCGC CGCCGCAAAGATCAAGGACCTCACGGCGGAGTTAGAAGACGCCGGTTCGAAGCCGTTCAACCCGGATGAGAGGATCCGAA CCGGGTTCGTCCAATTCAAGAGCGAGAAATTTGAGAAGAATCCAGATCTGTACGGTGAACTTGCCAAAGGCCAGAGCCCA AAGTTTTTGGTATTTGCATGTTCAGACTCAAGAGTTTGCCCATCCCATATTCTGAATTTTCAACCGGGTGAAGCCTTCAT GGTCCGCAACATCGCCAACATGGTTCCACCATTTGACAAGACAAAGTATTCGGGAGCAGGGGCGGCCATTGAATATGCAG TACTGCATTTAAAGGTGGAGAATATTGTAGTTATTGGACATAGCTGCTGTGGAGGAATAAAGGGGCTCATGTCTATCCCA GACGATGGGACCCCTGCAAGTGACTTCATAGAGCAATGGGTCCAAATATGCAACCCAGCAAAGTCCAAGGTTAAAACGGA TACAGGCAGCTTAAGTTTCTCAGAACAGTGTACTAACTGTGAGAAGGCAACTGTGAATGTCTCACTAGGAAACCTATTGA CTTATCCATTTGTGAAAGAAAGAGTTCTAGACAAAACGCTTGCATTGAAAGGAGCACATTACAATTTTGTTACTGGCAAT TTTGAGCTGTGGGATCTGAACTTCAAAGTTCAGCCTTCTATATCCGTTTAA
Protein sequence (LotjaGi2g1v0320400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGESYDEAIASLTKLLSEKADLGAVAAAKIKDLTAELEDAGSKPFNPDERIRTGFVQFKSEKFEKNPDLYGELAKGQSP KFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPFDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIP DDGTPASDFIEQWVQICNPAKSKVKTDTGSLSFSEQCTNCEKATVNVSLGNLLTYPFVKERVLDKTLALKGAHYNFVTGN FELWDLNFKVQPSISV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 256 | 256 | 2.1E-139 | – | |
| PANTHER | 1 | 256 | 256 | 2.1E-139 | – | |
| Gene3D | 39 | 256 | 218 | 6.7E-81 | ||
| SUPERFAMILY | 50 | 252 | 203 | 4.71E-65 | ||
| CDD | 55 | 244 | 190 | 1.73777E-98 | – | |
| SMART | 75 | 245 | 171 | 4.9E-53 | ||
| Pfam | 83 | 240 | 158 | 1.3E-42 | ||
| ProSitePatterns | 87 | 94 | 8 | - | ||
| ProSitePatterns | 131 | 151 | 21 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Carbonate dehydratase activity | Catalysis of the reaction: H2CO3 = CO2 + H2O. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Biological process | Carbon utilization | A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism. |
Expression pattern of LotjaGi2g1v0320400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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