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LotjaGi2g1v0324300.4

Overview

Field Value
Gene ID LotjaGi2g1v0324300
Transcript ID LotjaGi2g1v0324300.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Aminotransferase; TAIR: AT1G70580.1 alanine-2-oxoglutarate aminotransferase 2; Swiss-Prot: sp|Q9S7E9|GGT2_ARATH Glutamate--glyoxylate aminotransferase 2; TrEMBL-Plants: tr|G7JYY7|G7JYY7_MEDTR Glutamate-glyoxylate aminotransferase; Found in the gene: LotjaGi2g1v0324300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:79925016..79930950) extracted from Lotus japonicus Gifu genome v1.2.

ATGCCACCCAAGCCATTAGACTATGTGTCAATAAATGAAAACGTGAAGAAGGCTCAATATGCTGTCAGAGGTGAATTATA CCTTAGAGCTTCTGAGCTTCAGAAGGAGGGCAAGAAGGTATTGTAGAATTTCAATTTTCAGTTCATATTCAGTAAGTTGT AGCGTGTGTTTGTATTTACATTCAAGTTCGGTAAAAACACATTTACTCCACTGTGTTCGGTTTTCAGTTTGGAAGTCTGT TTGGGGTATTAGAATTCGAGATCACACATTTCAATGCCCCAAACGTGAAAGAGGCTTTGGACCTCCGTTGGTTCAAACTG AAAACCAAATAGGTGGATTGGCCAAAAGCACATTCCAACTTTCTTGGAATGTGCACGGATAGAAATACAAACACACCGGT GTGACTTTCACTCTTAGGATGGAGCTCTGAATTGGAACTGATCACTGAAGTCCTTTGATTGCATTTGTCTTTTATTTGCT ACTATAAAGGACTGGGTTTTCAGAGGATGTATGCAAGCTATACAGTAACTTGAAATTTGAAGCCTGCTATTGCAAACTGT TCATAGAGTCTCATATGTTTTTAGAGGGACCTATAAGTGCGCATGTTGTTGAATAAGTTGTTAATTGTTATGTCCTAGAC CTTTATAGTCTGGCCATCATGGTAACGGTAGCATGTTACTTGCTACAATTTGTTTTTTTTTTGGAACTTAATAGTGAAGT CCCCGGTCCTTGTTCGTACTGACTGTGTCTAACTCATTAGCTGTTTGAAAACAAACATGTTTATAATTGTGTTGTTATCA AATTGAAAGCCCTGAGAGTGGATTTACAAACAAGAGTGAGTATCAATACCTATATATGTTCATGTAAATATAGTATTATT AGTCCTATTATGTATACAGTCACCTTACATTTCCTTATAGCTGAGTTGTTAAAAAGAAATATATTTATACTCATGTCTAT CTTCTCTACATTTTTGGTCCTGCTCTCCCTGTCATACTACTTTAACTTATTTTCAATTGTTGGCAGATTATTTTCACTAA TGTTGGCAACCCACATGCTTTGGGACAGAAACCACTGACCTTCCCTCGCCAGGTTCAGCATAACTATCATATTTCAACTT TTACTGAATGTCCCTTGTAATTTTTATAATGTTAACAGCTAAATTTACTATTCGTGTCAAATTAAGTTGTTGGATTGTTG AAGTATTTTATTTGTTGATTATGCTAACCCGTGGAAATTTTACTGTTGCAGGTTGTTGCTTTGTGCCAGGCTCCATTCCT ACTAGATGATCCAAATGTTGGACTGCTATTCCCTGCTGATGCCATTGCAAGAGCTAAACAGTATTTTTCAGTGACCTCGG GTGGTTTAGGTAATCCATATGTGATATGTCAACTCATCCGTGTTTTCTCTTGCTAAATACTAGAATTAGTCTATGAAAAA ATATATAATTTGTACTGAACATAAATTCTGTGTTTTCTCTTGCTAAATGTTTTTTTTTTTCTTGGAAAATGTAGACAATT TTCATTAACTGAGCACACCATCCAAGGGTTTGGTATTTCTAGTTTGAATTTCTTATTTCAATTTTCAGTTAACCAAAGAA GAAATTGCTTCAGAAATATGGTTGCACCAACTAGATATTTGGAATAGTTTATGTCATGAGCTAATTATCCCAAAAGCTCA TGGTTTTATATTTTACTCGCCCCCTTATCCAAGGACACTCTGACTGTGAAGCATGGCCAATTGCATAGGCCTATTCTACC TTGTGTCAAAATTCACAATTTCACTAGAAGAATAGAGGGTGGCAAGGATTGAAATGTTGACAACTCTGTCATAAAGGCTT TGATATCATATTATAAATAACTATCCAAAAGCTGAAATCATTAGATGAAGAATTATGAATTGTTAGGGGAAGAAAGTGGA GTTAAAGTAGTTCAGTTAGATAGATTGTATTCTCTAGTAGCAAGTAGAGAAGTCAGGTAGAGGAGATATCATACATAAAT AGGAGCAATAAAAAATGGGAGGAATCGTTCTGTGATTTTAGAGATGTTTTGTGAAAGGAATCCTTTTGGTAAAGGGGAAT CCTTAGAGCAAAGATTTCTCTCTTGTTCTCAATCATTCAATTAGATTGTTCGTTTCTTTCTATCAATTCCCCATTTATTT TTCTTAGTTCCTAACATAAATGGTTTTGTATTTAACAGTTTAGTTGAGTAAGTTTTCACATATGATTAGTGGTCATCCAC TTGCAATATATCACATTGGAAATACACCTGGAATTGAAGATTTAATTTCTGTTAGAACAATGACGCAAGGAAGAGAAAAC CTCTTCCATTGCCTCCCAAGGACCTTTTAGCTGTGGGATTTCTTTTGCCTCAGTCTAAACCACATTAATTACTTTAGACT AAGAACTTAGAAAGTATTTAGGTCTACCAACATTCTTCTTAGCATGCAAATAATTCTTGTCGTTACCATCTAAAATTTAT ATCTTAGTATTACTATTGTACCATTGGCACTTTATCAATTCATCTTCTTATAACAGATTTAGGAGTTAAGATTTTTTCTT TGATATGATAATATCTAGTATCTACTGACGTACAGCAACTCATGAATATTGTAGGTGCTTATAGTGACTCCCGAGGCCTT CCAGGAGTGAGGCAGGAAGTGGCAGAGTTCATACAAAGGCGTGATGGTTATCCAAGGTATTTATGTTCCATGCTCATCCC TTTCCCTACTTATGGTGAAACCTTTTTTATAGCGTCTCTTTAGCTTAGTTTCCAATTTGTTAGGCAAAGAGGTTAATTGC TTGTTGCTCCATTTACAGTGATCCAGAGCTCATATATCTTACTGATGGTGCCAGCAAGGCTGTGATGCAGATATTAAATA CTATCATTAGAGGTCCAGAAGATGGGGTAATATAGATTTTTTCTTATTGCACTTCAGTTTTTTATAGTTGCAGTGCCATT TCAAATAATTTCCCAACACTCTGATTGCCAGATTTTGGTTCCAGTCCCACAATACCCACTCTACTCAGCAACAATTGCTC TTCTTGGTGGTACTCTTGTTGGATACTACCTTGAAGAGACAGCAAATTGGGGTCTTGATACTAAGGAACTTCGCAGATCA GTTGAACAGGCTCGCTATAAAGGAATAAATGTACGTGTGTTTTCTTTGCAAATTTTTTTGTTGCCGCACTGTTTCTAGAG TAATCTTATAAAGCTAAATGCTTATTGGTAGACACCAAACCAGCTGCGGTTGATACTTCTTCGTGATTCTTCTTAACTTG ATTACCAGAAATGACTTGGCTGGTGGCCTTTTGCAATAGTCAAGGGAAAAAGAATCAAAATATTATATCACTGATTAATG AGCAATCTTCTGTAATGCAATCTTAGAAAATCTTGGCTGTTTCTTGGAACTGTATTCTGCCAGTGACAAAGTCATCTAGT GAAGAACTATTTTTTTGTTATTTTAAAATTCGACATTCAAAGCTTCATATTTGAATTTGTCAAATCTCGTCTTATCCATT CATTTGATGTGTTTTTGAGGGAAGTGGCAAACTTTCTTATAAACTGAAATTTGATCAGGTTAAAGCAATGGTGATCATAA ACCCTGGAAATCCTACTGGTCAATGTCTTAGCCAAGAAAATTTAAGAGAGGTTTTGCAATTTTGCTATGAAGAAAACTTA GTCTTGCTTGGAGATGAGGTTTATCAGACGAATATATATCAGGATGAACGACCCTTCATTAGTTCTAAAAAGGTATGCGT TATTGTACTTCTAATCTTATGTTTTGCCTCATTTGTTAGCTTGGGCTAATTATATATTTCTTTATACAAAAAGGTTTTGA TGGACATGGGTCCACCTATAAGCAAGGAACAACAGCTTGTTTGTTTTCACTCAGTGTCAAAAGGGTATTTTGGTGAATGT GGACAGCGGGGTGGATACTTTGAAATGACCAACATACCTCCAGAGGTTTGTTCCCTAATAACCTGTGTTACTGAATTTTC TTGCACTGAGTTTCAAGCTGGGATTTCTCGCAACATTTGGAATATGTTTAAATTGGTCTACAAGTTGGTCATGAACTAAC TATGCAAAAGCTTTAAGCTGTTGTAAAAAAATGCATGGATGGTTTTATATCTAACATGTTGTATGACTTGTATCATGCAA GAGCCCTTTGGAAAATGCATAGACCCATCATATGGTCATACTAAGTCATTAAGCAACTACCAAAAAATTTAAGTTGTTGG GTGAAAGGTTGAAAACACATGAATAGTTTTTTGCCTAAAAAGATTTTAGCGCCTAAATTCTATTGCGCTTTTCAACTCAT TGAGAGACTCGTGTCAAAACATGGAGTGATAGAATAGTTGTTGATCATAAACAAGGAATACAATAAATATGCATCAGTAT CAAGATGTCAGTATTTCTCTGACTGTTATGCTCCCACATCTTGCATCATTACAGATTAACAAATATAGTTGGTACTTGTT ACCACATGTAATATGATGAACTGAATAATTTTGCTATGGTCTATGGTAACATAGTTCTTTTACACTCATTGCCTCTTGTC CGGATGTAGTACCTTCTGACTCTACATGTAAGGTATTCAAGCACATCGCCAGACCAATTTTTGGTTTAGCCAGCTGATTC TTTTCTTTGATTTTCAATTTCTTTTGCAGACAGTTGATGAGATCTATAAGGTTGCATCTATATCACTCAGTCCAAATGTT CCTGCCCAAATATTTGTGAGTATTTTAATTTCAACTGTATTTGTTCAAAAGTATAATTTTAGTGAGTACTGTTCTCTTTC CCTCTCATTTTATTTATCCTTCCCCTTTTGTTTCACCTTGGTCTGCAGATGGGGCTAATGGTCAATCCACCAAAACCTGG TGATATTTCTTATGACCAGTTTGTTAGGGAGAGGTAATCCTATGACTAAATTTGATAAATGTCAAAAGTGTTGTCCAGTT GACTTCGATTTTCTATGCATGTTGTATTCAAACATTATAAATTGAGCATTCTCCTACACATTGACAAGTATACATTTGAT CTAAAGTAACAAGAGGCTGTTTATTGCTTATAAAAAAAAAAACAAGATGCGTTTATGTAGTAAATTGACAATTATCTATG ATATGCAGCAAAGGAATACTTGAATCACTAAGAAGAAGAGCAAGGATAATGACTGATGGATTCAACAGTTGCAGGAATGT TGTTTGTAACTTTACAGAAGGTATAAACGATAGTGTTCCGAATGAATTCTATGTTTTCTCGTGTTGTAACTTCATTCTAT GATTGCCTTTGTTCCTGATAAATCATTGAGTGATCTCTTGAGTTTTGTTCAGGTGCCATGTATTCATTCCCTCAAATAAA ATTGCCACCAAGAGCTATAGAGGCTGCTAAACAGGCCAGAAAGGCTCCAGATGTTTACTACTGTCTCAAGCTTTTGGAAG CCACTGGCATATCCACTGTTCCTGGCTCAGGATTTGGACAGAAAGACGGGTACATACTCATCCATTTATTTTCTCATGTC TATTCCTTATTTAGAATTTGTATCCCCTTTTCTATGCTATTTTCTAAAGTGATCCCAGATGCTTCTGCTATGGCTTGTCA TGGATCATGAGAATGTGATTTAACTAAAGCCAAGTAAATAAACTCTGTGTAGGTTTGGTACTTGATAATATTATGTTTCT CAACTCTCAAGTAAACCTTCAAGAGCTACCAACATATATGATGGAGAAAACAAATAGCTAACTGGTTTTCTTCTTCTTCT TCTTCTACTTTTTCATGCTTCTTTGTGTCAAACTTTTGCATTCAGGTACTTCCATTTGAGGACAACTATTTTACCCCTTG AGGAGGAAATGCCTGCTATTATGGAGAGTTTTAAAAACTTCAATGATGAGTTCATGGAGCAATATGAAGACAATAGAGGT TATTCAAGGTTGTAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0324300.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCACCCAAGCCATTAGACTATGTGTCAATAAATGAAAACGTGAAGAAGGCTCAATATGCTGTCAGAGGTGAATTATA CCTTAGAGCTTCTGAGCTTCAGAAGGAGGGCAAGAAGATTATTTTCACTAATGTTGGCAACCCACATGCTTTGGGACAGA AACCACTGACCTTCCCTCGCCAGGTTGTTGCTTTGTGCCAGGCTCCATTCCTACTAGATGATCCAAATGTTGGACTGCTA TTCCCTGCTGATGCCATTGCAAGAGCTAAACAGTATTTTTCAGTGACCTCGGGTGGTTTAGGTGCTTATAGTGACTCCCG AGGCCTTCCAGGAGTGAGGCAGGAAGTGGCAGAGTTCATACAAAGGCGTGATGGTTATCCAAGTGATCCAGAGCTCATAT ATCTTACTGATGGTGCCAGCAAGGCTGTGATGCAGATATTAAATACTATCATTAGAGGTCCAGAAGATGGGATTTTGGTT CCAGTCCCACAATACCCACTCTACTCAGCAACAATTGCTCTTCTTGGTGGTACTCTTGTTGGATACTACCTTGAAGAGAC AGCAAATTGGGGTCTTGATACTAAGGAACTTCGCAGATCAGTTGAACAGGCTCGCTATAAAGGAATAAATGTTAAAGCAA TGGTGATCATAAACCCTGGAAATCCTACTGGTCAATGTCTTAGCCAAGAAAATTTAAGAGAGGTTTTGCAATTTTGCTAT GAAGAAAACTTAGTCTTGCTTGGAGATGAGGTTTATCAGACGAATATATATCAGGATGAACGACCCTTCATTAGTTCTAA AAAGGTTTTGATGGACATGGGTCCACCTATAAGCAAGGAACAACAGCTTGTTTGTTTTCACTCAGTGTCAAAAGGGTATT TTGGTGAATGTGGACAGCGGGGTGGATACTTTGAAATGACCAACATACCTCCAGAGACAGTTGATGAGATCTATAAGGTT GCATCTATATCACTCAGTCCAAATGTTCCTGCCCAAATATTTATGGGGCTAATGGTCAATCCACCAAAACCTGGTGATAT TTCTTATGACCAGTTTGTTAGGGAGAGCAAAGGAATACTTGAATCACTAAGAAGAAGAGCAAGGATAATGACTGATGGAT TCAACAGTTGCAGGAATGTTGTTTGTAACTTTACAGAAGGTGCCATGTATTCATTCCCTCAAATAAAATTGCCACCAAGA GCTATAGAGGCTGCTAAACAGGCCAGAAAGGCTCCAGATGTTTACTACTGTCTCAAGCTTTTGGAAGCCACTGGCATATC CACTGTTCCTGGCTCAGGATTTGGACAGAAAGACGGGTACTTCCATTTGAGGACAACTATTTTACCCCTTGAGGAGGAAA TGCCTGCTATTATGGAGAGTTTTAAAAACTTCAATGATGAGTTCATGGAGCAATATGAAGACAATAGAGGTTATTCAAGG TTGTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0324300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPPKPLDYVSINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLL FPADAIARAKQYFSVTSGGLGAYSDSRGLPGVRQEVAEFIQRRDGYPSDPELIYLTDGASKAVMQILNTIIRGPEDGILV PVPQYPLYSATIALLGGTLVGYYLEETANWGLDTKELRRSVEQARYKGINVKAMVIINPGNPTGQCLSQENLREVLQFCY EENLVLLGDEVYQTNIYQDERPFISSKKVLMDMGPPISKEQQLVCFHSVSKGYFGECGQRGGYFEMTNIPPETVDEIYKV ASISLSPNVPAQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARIMTDGFNSCRNVVCNFTEGAMYSFPQIKLPPR AIEAAKQARKAPDVYYCLKLLEATGISTVPGSGFGQKDGYFHLRTTILPLEEEMPAIMESFKNFNDEFMEQYEDNRGYSR L
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.90.1150.10
5 70 66 9.8E-11
IPR015422
PANTHER
PTHR11751:SF472
6 481 476 1.9E-296 –
PANTHER
PTHR11751
6 481 476 1.9E-296 –
SUPERFAMILY
SSF53383
8 467 460 1.17E-71
IPR015424
CDD
cd00609
81 462 382 9.11336E-57 –
Pfam
PF00155
85 447 363 1.6E-37
IPR004839
Gene3D
G3DSA:3.40.640.10
87 318 232 3.5E-50
IPR015421
Gene3D
G3DSA:3.90.1150.10
319 474 156 8.7E-40
IPR015422

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0324300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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