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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0326800 |
| Transcript ID | LotjaGi2g1v0326800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT5G09540.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q057X7|DNAJ_BUCCC Chaperone protein DnaJ; TrEMBL-Plants: tr|I1JC99|I1JC99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0326800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80215976..80218594) extracted from Lotus japonicus Gifu genome v1.2.
ATTAATCACTAATTAAAACATGAAATCAAATCATGAAGGACAGATTCTGAAAATTCAAAAAAATAAAAAAAGTACAGATT CTGGCTTCATGTACAAGCATAAAGCAATGACCAAATGAGCAAAATGACTAAACTACCCTTCTCTCTTCTCCCCTATATCT GTTGGCATTCCCTCACATCACAATCACACCTCACAGTCTCACACCAGAAAAAAAAAGTGCAAATGGACACTTCCAGAGGA CCCGGCTCCGATAACCCGATCGCCGCATGCACCGCCATGCTCTCCCTCCGCCAATTCTCCGCCTGCCGCGACTTCGCCTC CCGCTTCCCACCCTCCGACCGCCTCCCCCAAATCCTCGCAATCGCCGAAATTCTCTCCGCCGGCGACCTCTACTCCGTCC TCAATCTCCGCCGCTCCGACGCTGTTCTCGACCTGGCACTCGCCCGCCGGCACTACGCTAAGCTCGCCCTCCTCCTCGAC CCCACCAGTACTGACAAATTCCCCTTCTCCGATGAAGCCCTCGCACGTGTCCGTGAGGCCTGGCACGTGCTCTCCGACCC GGAACGGCGCGGTGCTTATGACCGTGAATTTGAACAGCGCGGCGGAGAGACGACGGAGGGTGCCTCGACGGAGACGTTCT GGACTGCGTGTCCTTACTGCTGGAACTTGTATTTGTATGAGAAGAGGTACCAGGACAGTGCGCTGCAGTGTCAGAGTTGC CGGAGAGCGTTTCATGGCATTGCGGTGAAGCCGCCGGTGGAGGATGGGGAGCCGGTGGTTGAGGGGGAGGAGCGGCGGCA GTACTATTGGTGTCGTGCGAGTGTGCCGTTGAAGTTTTATGAGGTGAAGGGTAAGGAGGGTGAGGGTGGAGGTGAGGGTG AGGGAAAGAACACGGTTCTTGAAAATGCCACCCAGTTTGTGTATATTTCCGATGATGATGTTGGTGGTGGTGGTGGTGGT GATGGGTTGTGGAAGAAGGTTGGTGTGGTTAATGAAGGGTGTGAGAGGGTGTTTCAGGGGAATGGAGGAGTGGGGTTGCA AGGTGGGAATGGGAAGAGGAGAATGAGGGTGAAGACTGTGGCTAAGAGGTCTGTTGGGAACAGGATGACAAGGTGTCTTG ATGATGACATTGGTTTTGATCTTGATGCGGATGATGGTGAATTGGAGTTCACTGAAGGAGCTGATGATGTCTTCATTGGT GTACGGTTTGATGGTTGATAGTTTCTTTTTACTTTCTTTCTGGTATTTGGTTAGTTCTAGCAGCATGCTATTGTGAAGCA GAAAGATAGTGTTTTTTGGATAGTGTTCTGCACATACTAAGAAAAACAACTGAGAACAGGAAATTGATAGTATAGTTGTT GATTCTGTGCTTACCTTGTTTTGGAAGAGGCATTGCATTGTTTATACACTGCAATTTTTGTAACGCCCCTTTTATCTTGG CCTTTTAGAAATTCAATAGAAAATATTTGGTTTGATTCATGATTGTATGCTTCAGTTGATAACAATGTGCTTGTCATACT CTGAGTGAGTTGGTTTCTGAGTCATAGTTTTTGTGGAAGCATGACACTACGTAGCTGAGCTTCAAAAGATTGAGTTCTCT GCACTTTTCTTAATACTTTGTTTATCACACATATTGCTGGTTAACTAGAGCCTAGGAATCTCAAGGACGTGCATACTAGG TTTAGTTTCACCATGTTGAACTCACTTCAGGAATGATTGAAGTATGAACTTTATTTCTTCATGATCAGTGACTGACTGAA GTTTTTAATGCTAAATTTGTTTAGGTTTAATTCAACAGGAATTTATGCTTTTAAAAGTAAATCTTGTCTACCCTAGTTGT AGAGAAAATTTTCACATGACTTAGCGTGTGTTTCTGTTTGTCATGTATCTTCAGATGTGAGATTGCACATTTCAGTGTGT TCAGCGTGAAAGGTAGCAGCGAGCTCCGTTGGTCTTGCATTCATTCGAACGCCATATCAATGCCAAATCAAACGCACCCT TAGTGTCTCAATGTTTATAAGACCCCATTACACATGAAGGAGAACAAAAAAAGTAGGAAGAGTTTTTTTTGCCATCTTTT ATGAACATTTTGTTAGACGTGTGATTTGCCTTTGCTGCAGTCCAAAGTGATTTCTTTTACTCTATAACAGTTTAGTTAGG ATATATTTTTGTAATCTAGTTTTTTCATGTATAAACTAATGGTGACCCTTCGTTTAGGGAAGTAATATACTGTTGTATCT GTATCTTGTAGAAAAGTTACCAAATGCATAAAACAAGAGAGTAAAGTATTATCCCCCATTCTGTTTTCATTGCACTGTAC TGTTCTTTTTCTCCAAAATGCTCTGGATTTTACATTATATGCTGTTAGGATATTGGTATTTTTTCTGTAATTGTGTTGAA CAGTTGTTGGTTTGTCTGCCAATTTACTCAGCTGCATTCTCAATTTTTCTTTTTCTGAGTGTCTATGCTGTGGTATAGTT CAAATTTCAAACTGGATTGGATGATGCAGCAACAAAACCCCAGAGCTCCATTGGATGGTGGTTGCATACCACATCAGTCC TCAATAATGGCAACTTAAAACTATGAGCTTTGATATCATTTGCTATTTGGATTGAGCTG
CDS sequence (LotjaGi2g1v0326800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAAAATGACTAAACTACCCTTCTCTCTTCTCCCCTATATCTGTTGGCATTCCCTCACATCACAATCACACCTCAC AGTCTCACACCAGAAAAAAAAAGTGCAAATGGACACTTCCAGAGGACCCGGCTCCGATAACCCGATCGCCGCATGCACCG CCATGCTCTCCCTCCGCCAATTCTCCGCCTGCCGCGACTTCGCCTCCCGCTTCCCACCCTCCGACCGCCTCCCCCAAATC CTCGCAATCGCCGAAATTCTCTCCGCCGGCGACCTCTACTCCGTCCTCAATCTCCGCCGCTCCGACGCTGTTCTCGACCT GGCACTCGCCCGCCGGCACTACGCTAAGCTCGCCCTCCTCCTCGACCCCACCAGTACTGACAAATTCCCCTTCTCCGATG AAGCCCTCGCACGTGTCCGTGAGGCCTGGCACGTGCTCTCCGACCCGGAACGGCGCGGTGCTTATGACCGTGAATTTGAA CAGCGCGGCGGAGAGACGACGGAGGGTGCCTCGACGGAGACGTTCTGGACTGCGTGTCCTTACTGCTGGAACTTGTATTT GTATGAGAAGAGGTACCAGGACAGTGCGCTGCAGTGTCAGAGTTGCCGGAGAGCGTTTCATGGCATTGCGGTGAAGCCGC CGGTGGAGGATGGGGAGCCGGTGGTTGAGGGGGAGGAGCGGCGGCAGTACTATTGGTGTCGTGCGAGTGTGCCGTTGAAG TTTTATGAGGTGAAGGGTAAGGAGGGTGAGGGTGGAGGTGAGGGTGAGGGAAAGAACACGGTTCTTGAAAATGCCACCCA GTTTGTGTATATTTCCGATGATGATGTTGGTGGTGGTGGTGGTGGTGATGGGTTGTGGAAGAAGGTTGGTGTGGTTAATG AAGGGTGTGAGAGGGTGTTTCAGGGGAATGGAGGAGTGGGGTTGCAAGGTGGGAATGGGAAGAGGAGAATGAGGGTGAAG ACTGTGGCTAAGAGGTCTGTTGGGAACAGGATGACAAGGTGTCTTGATGATGACATTGGTTTTGATCTTGATGCGGATGA TGGTGAATTGGAGTTCACTGAAGGAGCTGATGATGTCTTCATTGGTGTACGGTTTGATGGTTGA
Protein sequence (LotjaGi2g1v0326800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKMTKLPFSLLPYICWHSLTSQSHLTVSHQKKKVQMDTSRGPGSDNPIAACTAMLSLRQFSACRDFASRFPPSDRLPQI LAIAEILSAGDLYSVLNLRRSDAVLDLALARRHYAKLALLLDPTSTDKFPFSDEALARVREAWHVLSDPERRGAYDREFE QRGGETTEGASTETFWTACPYCWNLYLYEKRYQDSALQCQSCRRAFHGIAVKPPVEDGEPVVEGEERRQYYWCRASVPLK FYEVKGKEGEGGGEGEGKNTVLENATQFVYISDDDVGGGGGGDGLWKKVGVVNEGCERVFQGNGGVGLQGGNGKRRMRVK TVAKRSVGNRMTRCLDDDIGFDLDADDGELEFTEGADDVFIGVRFDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 367 | 345 | - | – | |
| PANTHER | 37 | 367 | 331 | 2.2E-128 | – | |
| PANTHER | 37 | 367 | 331 | 2.2E-128 | – | |
| Gene3D | 83 | 173 | 91 | 9.9E-10 | ||
| SUPERFAMILY | 84 | 159 | 76 | 4.58E-10 | ||
| CDD | 91 | 148 | 58 | 1.42805E-5 | ||
| ProSiteProfiles | 91 | 159 | 69 | 11.016 | ||
| Pfam | 91 | 156 | 66 | 1.1E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0326800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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