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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0327200 |
| Transcript ID | LotjaGi2g1v0327200.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT5G65470.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|I3SJE6|I3SJE6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0327200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80267796..80271262) extracted from Lotus japonicus Gifu genome v1.2.
AGACAAACCACCGGATCAGTACATCATCATGTTCATCTGTCCTGTTCTAAGCTTTTTATTTGGTCCTGCACGTGTCATTT TTGTTGGTTTATTGGTTTCCATTATAACTTTCAGCTTGCTTTATGCAGGAATTGAATCCTATAAAACCGAGGCACTCACG TCTTCTCAGGAGTGCTGTGCAGCGTGAAACTGTAAGAGTTGATCTGAGTTGTGAACACATTTTCAGATTACTTTAACTGC CTTGTGTTATGCTTTTCATTTTTTATATCATTTTATTTTCTCCTTGTGTAGCCAACATCTCAACTTTCTGAAATATGGTC ACCTTTGGAAAACCAAGGATGGAAACCGGTTGAGTCTAGAAATAAGCCAAGTGAGTGAAATTAATATAATTTACTATATT TTGTTTTATCTCTGAGAGCACTTCGCATTTTCGCATGTCTAATGGTTTGTTTAATCTCTCTGTGGCTGACATTTGAATCA AAACAGCATTACCAGAGAAGTCCGAGGGATACATCCAGGTATTTCTTGATGGAGGTTTGAACCAGCAAAGGATGGGGGTA GGTATCTAAAGCCCGTTAATTAAATCAGATGTTTTCTCATGTGTAGCATGAAAGGTGTATAATTCAAAGTTATTGTTTAA TTATTTCTTGTAGATATGTGATGCAGTTGCTGTAGCAAAGATACTGAATGCAACTCTTGTGATCCCATACCTTGAATTAA ATCCTGTATGGCGAGATTCAAGGTGATTGCAGAAACCATCTGTTCATTTTGTTGCACTTTTTTGTCCCATGAATTGTGCA TGATGTAGTATTCTGATCTTGCATTTGTTTCCTTGCAGCTCCTTCATGGATATATTTGATGTGGATCATTTCATTGATGT ATTGAAGGATGATATTTCTATAGTTAAAGAGCTTCCTGAAGAGTACTCGTGGAGCACAAGGGAGTACTATGCCATTGCTG TTCGCGATACCAGAATCAAGAATTCACCTGTGCATGCATCGGCCAACTGGTATCTGGAAAATGTTTTGCCTGTCTTGCAG AGGTTGGTAATTACCTGAAATTACTTTAAATGATACTCCATGACTTGAATATTCAGGATCAAATATTTTTAAATAGTTGA TTCAATGATTAAACTAGACATTACTATTCATGATTACCACCACTTCAGCATTTGTTATGCAACATGATCAAATATAGAAC CTCTTCTGACCACTGTTCTGACTATTGCTTCTTAGTTCTTAAATAATCATTATAAATTATAACCATTTGGTGGAAGTCAG TGCAGTGACTATCCCCCACATTGTACAGTTCCTCAAATGATATATAGGAATATGATAAGGTTGAGGTGGGCTGTTGTTAA GTTATAGTACTATTACCAATTTGATGTTTATTTTCAGAAGGTAAAATATTCTTCGCTGCCCTGAGTATCACTCTGTTTAT TTAACATAAATATGACTTAGTTTAAGGTGTATATATTGTGATTATCCATAATTGTATATTCTCTCAATTATGAACTTCTA ATATCCGTTTTTTCTGTTGTAGTTTTGGTATTGCTGCAATCTCTCCATTTTCTCACCGCTTGAGTTTTGACAACTTGCCT ATGGATATCCAACACCTGCGCTGTAAAGTCAACTTTCAAGCTTTAGAATTTGTTCCTCATATTAGAACACTTGGAGATGC CCTCATCAACCGCCTTCGCTCTCCTCAAGGCTCTGCTGGAGAAATCGGTTCCAACTATCTTCAAGAAGTCACTGATGGAG GTGATAGTAAAAATGCAGGGAAATTCGTTGTTCTGCACCTCCGATTTGATAAGGTCTTTCTCTCTTTTTAATTATTCACA TCTATCATCTACATGGTTGTAAAGTTGGTTTTTGTCTTTTTCTTGGTTCTTTCATGTTGGTGGTGCAACTATCTCTAAAT TATGAGTGAATATTGGAAATATTTGTAGTTTATGATATAGGAAATAATATTTTAATGGAAATTGCACGAGTGTTTGGTAA TTTGGATCACTTGCTTCGCATCTCCGTATGTCTTTTTCTTTGTAGAACATCCACTCTGTCATGCATCTATCTGTAAATTC AGAGTTTTGGCTTATCAATTGGTTTTTGGCAGGATATGGCAGCTCATTCAGCCTGTGATTTTGGTGGGGGAAAAGCTGAG AAATTTGCCCTTGCAAAGTATAGACAGGTGATTTGGCAGGGAAGGCTTCTCAATTCTCAATTCACTGATGAAGAGTTGAG GAGTCAGGGTCGTTGCCCAATGACTCCAGAAGAGGTTGGATTGTTGCTAGCAGCTTTGGGATTTGACAACAGCACGCGTT TATATCTTGCTTCTCATAAGGTTTGATCATGTTGCTTATTTTGACACAGTATAGAGTTTAGACTCATTCATTTACTATAT GTGGCTTGTCATTTTCTAAAATTGGGAAGATGATCATGCCTTACCTGTTTTTAACTGAAGTAGTTGTCTTTCCCAGGTCT ATGGTGGAGAAGCAAGGATTTCAACTTTGAAGCAATTGTTTCCTCTGATGGAAGACAAAAAGAGCCTAGCTTCATCTTAT GAGCGTTTTCAAATAAAGGGCAAAGCTTCTCTATTAGCTGCACTTGACTACTATGTTGGCCTGCATAGTGACATCTTCAT CTCTGCTTCTCCAGGAAATATGCACAATGCAGTGGTGAGTTCTACTAGATGCTTTCTTAAATGGCTAATGAATCTTTTTT TAACCTGATGACATTGAAGAATATATAATTTTATGATGTTACTTCTCACGTAACTAATAGCATGTTTGGAAAATTGATTC TAAAGCAAAATTAATTCTTGGGAGAATCTGATGTGAGTAGCTTCTGGATCTCAGAATTGATTCTGAGAAAAAATAAGCTG ATCCAAACATGCTATTTGTCTGCAATGATGATATTTTATCCAATCCATTTATTTCATGTTGAGCCTAGTAAAGGTTAAAT GTTCATTTTCATTATGAGGTGCCCTTTGGGCCAGGATAAAAAACTTGTTATGAACATGTTACAATAATGAATTACTCATT TGGAATTTCGTACAAGAAAACTGTATTTACACAAGTTTCAGAGTAACAGCTATTTATGATCAATGTAAATGTCACCTAGG AGTTCTGATTACACTGACAAAAGGTTTTGTTTTGAAAATAAATATCATCATAATTATCTCTTTATGAAGCATGACAAGGT TGTTGGCATACGGTTGAGTTGAATTTATAGCTGATGATCAATGTTTGGTTGATGTAGGTTGGACACCGCACTTACTTGAA CTTAAAGACTATAAGGCCAAACCTGGTATTAATGGGTCAACTCTTCCTGAATAAAACCATGGAGTGGTCAGAGTTTGAGC ATGCTGTGGTCGAGGGTCACCAAAATAGACAAGGTCAACTGAGGCTGAGAAAGCCCAAACAGTCCATATACACATATCCT GCTCCTGATTGCATGTGCCAAGCTTAA
CDS sequence (LotjaGi2g1v0327200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGAATTGAATCCTATAAAACCGAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAGCGTGAAACTCCAACATCTCA ACTTTCTGAAATATGGTCACCTTTGGAAAACCAAGGATGGAAACCGGTTGAGTCTAGAAATAAGCCAACATTACCAGAGA AGTCCGAGGGATACATCCAGGTATTTCTTGATGGAGGTTTGAACCAGCAAAGGATGGGGATATGTGATGCAGTTGCTGTA GCAAAGATACTGAATGCAACTCTTGTGATCCCATACCTTGAATTAAATCCTGTATGGCGAGATTCAAGCTCCTTCATGGA TATATTTGATGTGGATCATTTCATTGATGTATTGAAGGATGATATTTCTATAGTTAAAGAGCTTCCTGAAGAGTACTCGT GGAGCACAAGGGAGTACTATGCCATTGCTGTTCGCGATACCAGAATCAAGAATTCACCTGTGCATGCATCGGCCAACTGG TATCTGGAAAATGTTTTGCCTGTCTTGCAGAGTTTTGGTATTGCTGCAATCTCTCCATTTTCTCACCGCTTGAGTTTTGA CAACTTGCCTATGGATATCCAACACCTGCGCTGTAAAGTCAACTTTCAAGCTTTAGAATTTGTTCCTCATATTAGAACAC TTGGAGATGCCCTCATCAACCGCCTTCGCTCTCCTCAAGGCTCTGCTGGAGAAATCGGTTCCAACTATCTTCAAGAAGTC ACTGATGGAGGTGATAGTAAAAATGCAGGGAAATTCGTTGTTCTGCACCTCCGATTTGATAAGGATATGGCAGCTCATTC AGCCTGTGATTTTGGTGGGGGAAAAGCTGAGAAATTTGCCCTTGCAAAGTATAGACAGGTGATTTGGCAGGGAAGGCTTC TCAATTCTCAATTCACTGATGAAGAGTTGAGGAGTCAGGGTCGTTGCCCAATGACTCCAGAAGAGGTTGGATTGTTGCTA GCAGCTTTGGGATTTGACAACAGCACGCGTTTATATCTTGCTTCTCATAAGGTCTATGGTGGAGAAGCAAGGATTTCAAC TTTGAAGCAATTGTTTCCTCTGATGGAAGACAAAAAGAGCCTAGCTTCATCTTATGAGCGTTTTCAAATAAAGGGCAAAG CTTCTCTATTAGCTGCACTTGACTACTATGTTGGCCTGCATAGTGACATCTTCATCTCTGCTTCTCCAGGAAATATGCAC AATGCAGTGGTTGGACACCGCACTTACTTGAACTTAAAGACTATAAGGCCAAACCTGGTATTAATGGGTCAACTCTTCCT GAATAAAACCATGGAGTGGTCAGAGTTTGAGCATGCTGTGGTCGAGGGTCACCAAAATAGACAAGGTCAACTGAGGCTGA GAAAGCCCAAACAGTCCATATACACATATCCTGCTCCTGATTGCATGTGCCAAGCTTAA
Protein sequence (LotjaGi2g1v0327200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQELNPIKPRHSRLLRSAVQRETPTSQLSEIWSPLENQGWKPVESRNKPTLPEKSEGYIQVFLDGGLNQQRMGICDAVAV AKILNATLVIPYLELNPVWRDSSSFMDIFDVDHFIDVLKDDISIVKELPEEYSWSTREYYAIAVRDTRIKNSPVHASANW YLENVLPVLQSFGIAAISPFSHRLSFDNLPMDIQHLRCKVNFQALEFVPHIRTLGDALINRLRSPQGSAGEIGSNYLQEV TDGGDSKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKFALAKYRQVIWQGRLLNSQFTDEELRSQGRCPMTPEEVGLLL AALGFDNSTRLYLASHKVYGGEARISTLKQLFPLMEDKKSLASSYERFQIKGKASLLAALDYYVGLHSDIFISASPGNMH NAVVGHRTYLNLKTIRPNLVLMGQLFLNKTMEWSEFEHAVVEGHQNRQGQLRLRKPKQSIYTYPAPDCMCQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 472 | 471 | 9.1E-296 | – | |
| PANTHER | 2 | 472 | 471 | 9.1E-296 | – | |
| PIRSF | 4 | 472 | 469 | 1.4E-176 | ||
| Pfam | 58 | 410 | 353 | 7.6E-62 | ||
| CDD | 58 | 415 | 358 | 4.25072E-152 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0327200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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