Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0337000 |
| Transcript ID | LotjaGi2g1v0337000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; TAIR: AT1G32210.1 Defender against death (DAD family) protein; Swiss-Prot: sp|Q39080|DAD1_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; TrEMBL-Plants: tr|A0A1J7GF25|A0A1J7GF25_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0337000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81404329..81407380) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAATGAAAGTCGTGTTTGGAGAAGACTTTAGAGGATGTGGAGCTGAAAGCAGAGAGAAGAAGAGTGAAGTGTAGAAG GAAGAAGAAGAGAGTTCTGGTTTGTGAGAAATGGCGAGGTCTACCACCAAGGATGCCCAGGACCTTTTCCGTGCTCTTTG GTCTGCGTATTCTTCAACCCCCACAAATCTCAAGGTTCCTTTATCTCTGTCTCTCTTTCTCTCAATTTCTCCAAGAATCT TCACGTTTTCCTAACCCCACTTCGTTTCTTCTTTCAGATCATTGATGTGTACGTCGCCTTCGCCGTCTTCACCGCTCTCA TCCAGGTACACTTCAACCTTAACCTCTATTTCCTCCAGATCTGTCATTTTTAGCTGTTGTTTTGATGGTACTTGAGTGTG AGATTGGCGAATTGTGCTGATCGGAACTTCGATCAATCCTTGGTCATTGTGGCGGTTTCCGATCCAACTCTTAATTTGGG TAGTTGCTTTCAATTTTGTTAATGTAGTAGTTTCATTGCTTAGACAATGCATAGCATTTTCATTTTGTTTAGGGTTTTGT AAGTGGATGAATATACTATTTTCCATTGGAATGATGTGAACTTAGTGGTTACTTGGTTTAGTATATCTTGATTTGGCATT ATAAGCTTTGATCACTGTTTTGGGTTTAGAGATTAGATGGTTCCACCCTCAGTCCCCCACCTTTGTAGCAAGTAGATTGT TTGTCATGTGTATAAGTGAAATGGATCTGAGGCTTATGCTGTTATTGCTCGTGAATCCGCTAAACAACTTATATTTAAAG GGAAACCCCATGAATCAAGAAGACCTAATGTCGAAAACATGATTTTTGGGAAGCAAATGATCTCAAGGTTGAAATTCAGG CTTGCTCGACACGGCGTGTTGAGATGTGGTTTGGTATTCAAATAGATTACCTTGACGATCGGTTGGTGTTTGGTAAATGT AGATTCAGTGGAAAAAAACTGCCATAATAAGGGCATTGGCACTTTATTTTTGGTACCTTAATGGGACATTGAGCAGCTGC CTAATGGACGATTGATGCTTCTTCAAGCCTCGAACTAGCTAAATATCAAGGAATTCTGTTAGGTATTAGGCACCTTCTGA CCTGTTTTTATTCAGTGTGTGTTTGGAAACCCAATAGGTTTTTTAGTTTGAGGGAGAAGTGATTTTGGGAGAAGCTGCTA GGAGGAGCTTCTTTGAGAGGATAAATGATTATGGATGAATTACAAGTGGATCCAATTCCAAACATGCTGTAAATATTGAA GTAGAATCTGGTTGCCTAGAACTTGCACAAACTCTCCATTGTGTTGTCAGGAAATTCTCATCTTTTGACCTAGAACTGGG GTTTTGCGTTTCTTTAAGGTACAGCACGTTTGAGGGTGTTCCTTCTCCCACACTAAAAGAAAATGCAGTATGATAACTCG TATCTTAGCTATTCTAACAAAGTAATATAGTGAGTGTGTGGATTGTCGAAGTATATCCATTGATTTGTGTTCTTGCCTGA CTGGATATTCTTCCAGTTTATAGTTTTAGTGAATTCCCATTTTTAATATTTTAAGAAATATCTGACAATTTAATTTAATT TTTTGCTTATGGTTCAAAGTTAGTTTCAAGGTTTATGTTACAGTTAATTGCTCTTATTGAAACTTACATTATTTTTTCTT TATGAACAGGTAGCTTATGTGGCTCTTGTGGGATCATTTCCATTTAACTCCTTCCTTTCAGGAGTACTTTCTTGCATAGG GACTGCAGTTCTTGCTGGTAAGTGTCAAATGTGTATTACAATTTGCAGGCTAGCTAGTTATGCATATTTACACACAGTCA TATACACAATTTTATACATTGAAACTTCTAAGCCTACAAGATACATTTGAGTAGATATGAGACTTCTAAATTTACTAGGT ACAACACATACATAAATGTAGTTTGTCTCTCTAATCTTTTGTTATCATCCTTTATTTTGAACCAGTCTGTCTTCGGATTC AAGTGAATAAAGAGAATAAGGAGTTCAAGGTAAAAGTCATTTCCTCATTTATTTTGATCTTTGAGATGATTTATGCAAGT CAAATTGAAACCTGGAATTACGCATGAAAGTTGCAACCGATAATACTTTTAGGTTTACTTTCTTTTGTTAATCTTATTAT ATTTCAACAACTTGGCAAAATTTTGTAGTTTCATACTTAGATCCCTACATCTTTAACTTGACAAAACGAAGCAGGAAGGA AATGAATAAATGAAATGATGTGTTGTCTCCATATTGTTTTCACTTGATATATTCTTACAGATATTTGGTCTTCTGTCCCA CTGCAGGATCTTGCACCGGAGCGTGCTTTTGCAGATTTTGTTCTCTGCAATTTGGTGCTCCATTTGGTGATCATGAACTT CCTTGGTTAAATTGGGTTCATGTGGCTTTTGTTGTTTTCAAGAGAACCCTCGGATGATAAAAATGAGTAGTATTATACCT GGATTTTTGCAATAGTGTTTACAAACAGTCACTAGCATTTAACTGATTACTTCATTTTGCAATACTGTTTTGAACATAGA GATGATAGATGTTGAATTTGCCATATTTTAAACTACTTTTTAAATGGTGAATCACACAAGGCACTCATATGGATATATAA ATCTGAATACTACTCCAAAACACTCGAAAGAGAGCCAAGTTGCAGTCCTCCATCTTATTTTCTGTGAGGTCCAATTTTTT GAAGTGCTGGAAGATTGAAATATCGGTGGAGGATTTTTTCGCATGCTTCCAAAAGATCAAACAAAAAGCTCTAGTTTGTA GAGTGTAGACTAGCATATGGCATGAGATCATACGAAACCTGATTGCAAACCAATTCAAACTACACTTATTATTTTTGCTA AACAAGTGTGGGTCTTCAACTTGTTCCAACCTTTCTTTCCCAAACCTAGAGATCAATATTAGAACCTTATCTCGGATATT GGCATATTGTAGACTCTCCTTTCTCCTCTGTTCCTGGGATTCTAATCCCTGTTTGACCTTTTCTAACCACCCTTGATTTA TACACAAAAAAA
CDS sequence (LotjaGi2g1v0337000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGGTCTACCACCAAGGATGCCCAGGACCTTTTCCGTGCTCTTTGGTCTGCGTATTCTTCAACCCCCACAAATCT CAAGATCATTGATGTGTACGTCGCCTTCGCCGTCTTCACCGCTCTCATCCAGGTAGCTTATGTGGCTCTTGTGGGATCAT TTCCATTTAACTCCTTCCTTTCAGGAGTACTTTCTTGCATAGGGACTGCAGTTCTTGCTGTCTGTCTTCGGATTCAAGTG AATAAAGAGAATAAGGAGTTCAAGGATCTTGCACCGGAGCGTGCTTTTGCAGATTTTGTTCTCTGCAATTTGGTGCTCCA TTTGGTGATCATGAACTTCCTTGGTTAA
Protein sequence (LotjaGi2g1v0337000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARSTTKDAQDLFRALWSAYSSTPTNLKIIDVYVAFAVFTALIQVAYVALVGSFPFNSFLSGVLSCIGTAVLAVCLRIQV NKENKEFKDLAPERAFADFVLCNLVLHLVIMNFLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 115 | 115 | 2.5E-61 | ||
| PIRSF | 1 | 115 | 115 | 2.4E-45 | ||
| Phobius | 1 | 29 | 29 | - | – | |
| Pfam | 10 | 115 | 106 | 4.8E-40 | ||
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 30 | 50 | 21 | - | – | |
| Phobius | 51 | 55 | 5 | - | – | |
| Phobius | 56 | 76 | 21 | - | – | |
| TMHMM | 58 | 80 | 23 | - | – | |
| Phobius | 77 | 95 | 19 | - | – | |
| TMHMM | 95 | 114 | 20 | - | – | |
| Phobius | 96 | 114 | 19 | - | – | |
| Phobius | 115 | 115 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Oligosaccharyltransferase complex | A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0337000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…