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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0345000 |
| Transcript ID | LotjaGi2g1v0345000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat family protein; TAIR: AT5G07840.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q8C8R3|ANK2_MOUSE Ankyrin-2; TrEMBL-Plants: tr|C6TMS2|C6TMS2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0345000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82206423..82210447) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAAAAAAGAGCAACAACAACAACAAACCCCAACCTTGATAAGGAGAAGGGAAAGAAATGACCTATGATTCAACCATA CCGGGAAGGAACATAAAGTCTATATCTTATGGAGTTGTCAACATGATGATCGTTGGCAGATTTGCAGGTAAGGGAGTCTC ATTCAATACCAAAATGAGATCACTCAAAAAGGTAACATACACCTCCTCTAACAAATTTGTGCGCCCCAACTATGAAGACG AGTCCCACGTTGGATAAAAAGATATTCTGTTGGCATGGGTTGGTTTTAATTAATGGGCAATGGAATGAAAACAATTAAGA TTAAGATATTCTTTCTATCACCAAAAAAACAATAAATCAGTATTTTCAAAAAAAAAAAACCAACCAATAAATAAGTAGAG AGTACCAAGCGCACAACAACGAGATTGGAAAGATATAGTTCATCTGGGTTTCCTAGGGTTTCCTACCACCGCTTCCTCCT CCTTGTACACGCCAATCTCCACCGCCCCGATGAAACCAGGCTTCATCTGATTCCTCTTCACCACTCTCCTTCTCCGTCTT GCAACCCTCTCCTCAATCGATTCCTATTATCATGAATCCAATCTTCGTCGTCCACAACCTTCGCGTCTTCGGTCCCGGCT TGAATCCGTTTGCACCCTATTGCATCGCCAATCACTCTCTTCTCTCTCGCTAATTCCCCTTCCCTCACCACCCTAATCTC TTCAATTCCTCAAAAAAACATGTAAATTAAGCCATCTTCCAGATTCCGTTGAGTATCCTGCAATCTGAGATTGAAACTGG TTGTACCAGAACCCAGTACCTTGTGTGATTCTAGGGTTTGGGTATTTTGTTATTGCTGTTGTTCTCGTTGTTGTTGTTGT TATTTATTATCATCACGGTTTTTTTTGTTGTTGCGTTGATTGAGATATGATCGAGGAACAGCCATTTGAATTGCGAAAGA GCCCTTCGCGAAGGCGCTTGTTGAGACCTGCGGTTGGTACCGATGACAGGGGTTGGACCTTGCTTCATGTTGGTTCTCGC AAAGGTGATATCAAACTGGTGAGTTTTTGTTTTTTCAATCAGCTCCTTGCTTTTGTTTATTGATTACTGAATTTTATGGA TTAAATTGGATAATTAGATGTTGTTTACTTGTGATGTTTCGGTTTGAGAGATGCCCAAATACAAGATTGAGTTGTGTGAT AAGGAAAAACTGAAGTTTAGAGATGTTGGGTAGCTTTATCTAGCAAATTTGAGGCTCCCACACAATTTAATGGTTGATTA TATTTGAATTTAGATGATCTGCTCGTGTTTTTGCAGTTACGACTATTACTCTAAAATATGATGTTTATTGCCCAAACTCT GATATGACTCATGAGATGCAGGATTATTATTTGTTATTGCCCTCAATTCTTGCATCTTTTTTCAGAAGGACAGGGGAAAT ACTTTTTAACTTGGGTGATATACTCATAGCCTCATACATGTAATAGTCTAATAAACTAGGGTGATATATATAATAGTATA GTAGCAGGAATGAAAATGAGCAGCTGCTGCATTTTCTTGGTTAATGATTATTGAACGTGAGCTTGAGGTGTATAGCAAAG TTCTCAGCTCATACATTTTGTTGGTTTTTCTTTGTCATTTTGTTATTCATAATTTCACATTGAAAATGAAAGCCAATTTG CAGAGCAAGAGCGTCTATAAAATAATGGCGCACCTTGCCTTGAAGGTTGGCAAAAACAATCACCATTGCGATTCTCCGTG CCTATCAAGTTGATTGAAGTCGTTTTGATGATGGCCTCGAACATGTCGCTACATTTAACCCACTTTTACTTTAATTCCTT TCAAAGAAAATGGGGAAGACTCATGGCTGTTTCTACATTTAATGTTTCTTATTGGTCTTTTCCTAGAATATTCAATTTAT TTTATCTAATTGTTCCTTTTGAATTCTTATATTTTGAGAATAGGTTGTCCTTTATTATTGAATTTGTATACTATTTTTTA ATGTGAAAATCTTATTGGGACCAGAAAAAAATATTAACAAGTAGTTGCTATGCATAATGATACTAACTGAGTTGTAGTGA AGAGGGAGACTATTTCTTCATCTGGGTCTGTCTGCTAGTTGAGTTGAGTTCCCTTTTCTTTCTCACTGTCTCGTAGAGGG ATAAAGCCAAACAAACATCACAGAATCAAAATGGTTTTTTTCTAAAGGTATCAATCTGAAATTTACTCACTCCGAACAAC AAAATAGCAGAAGAGATTATGCATCTTCTCCTTGCCCTATTTCAGATCTTTCACCGCCTACTCCCTTCTTTTTTCTAAGA GTTCCTTTGATTCACTACTCATTTCTCACTGCTTTAAGTGAATTCTTGATTTGAAGTAGAAAATAATGTGTTTTTCTTCA AATTGTTTCTGTCAGAATATTGAAATTTTGTTTCTTTTGTAATTAATCTGGGTGTTTGACAGAGCACTTGGTGGTGTTCA TTCTATAATCTAATATACAGTGGTGTTTATTAGGCCCCTCCAAAATTTCAGCTCAAACAACACCACGAAGTGTGCTTGAA TTCTTGTCCCCCATTCAGCTGATGTTCTGTTAACCATTGGCTTGTTCATGATCTATTGTTACTTTAAGAATTAGAATTGC CTCGTATTTGGACCAAAAGGGTTCTCAAGTTTGTCAAATACGAGCATCTGCTAATAGTGTTCCTAAACAGGTGAGAAAAC TTCTCAAGGAAGGAACAGATGTCAATGTGTCTGCAGGGGGCCCTAAATCAAAAGGGGTGACACCCCTCCACCTCGCTGCT GAAGGTGGTCACCTTGGAGTCATGGATGAACTGCTTGAGCGTGGTGCCAACATTGATGCCAGAACAAAAGGGGCTTGTGG CTGTAAGTTTATATCCCTTTCTCTGAAGCCTTTAATACTACCTATGTGCATGTCTAAAATTTTAAATTTCATATTCACGA GTGTTCTTCTTATGAAATCAGGGACTCCACTTCACATTGCAGCCAAAGAGAGGAGGAAGGATGCTGTGAAGTTCTTGATA GAGAATGGAGCTTTCTTGCCACCGGACATCAATGATTGCCGATTTAATCCTCCTCTTCATTACTGCCCAGGACTTGAATG GGCCTATGAAGAGATGAAGCGAATTCGACATGTAGACTCATCTGCTGGGGAGACATCTTGCAGCTCTGAAAGTTAATTTG CTTTCTGGGATTCGGTTGATGTTTGGATCTCTATCTTGTGTGAATAAATGTAGAATTGAAACAAACAACTTACTATGCAT GATTTGCTTCATGGGACTGAGTTACTATTTTAGTACTTTGGATGCTCTTATTATGGAAACTATGATGTACGGTGATTAAT GTTGCGTGTATTTTCTTGGTGGGTGCACTTTCCATATGGACAATGAAATGGGTATCATCCTGCAATTTTAATATATTTTT CGTTTTTGAGAACCATTGTGAAACCTTTATCAGTTTTAATTTTTGTTGGGTTGTTTGGGTTCTTTGATTAAAATGTGTAG ATTTGTTTGTTTTGGAATAGTTTCTTTTTCACAAAAGTGTGTTCACTGATTATTGTGTATTAAGGACAAAACTGCCTAGT ATTTTATGGTGATGTGAGGCGAAGTGACAATGGGCAGCGGTGGCTTGAATGGCGGAGGAGAGACATGGAGCAACAATAGC TGGCGGAACAAAGGGTGATGGTGGGGAAAGCATGACCAAGGTGGACTCAATTGTATGAGAACTTGATTCAGTACTATGAG AATGGGAAAGAAACTCTGGATTTATTCACAATTTCATTCCATTAACAACAATTATGAGATAATCCAGGTTGCAATGCTTT ATTTGAAGATAATACAAAATGGATGTAAGCAATTGGACCCAAGTTCTATCCTTAGAATAATTGCTTAGTGGCTATAGTAA AATGAACAATATACTAACTACTGCAATTGGTTAAAACTTTTGATTAAGTAGGTTGAAAATAAGTAGGTTGTGTGGAGATT TTTCGAGGAGCGATTTCAGCAGGAG
CDS sequence (LotjaGi2g1v0345000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCGAGGAACAGCCATTTGAATTGCGAAAGAGCCCTTCGCGAAGGCGCTTGTTGAGACCTGCGGTTGGTACCGATGA CAGGGGTTGGACCTTGCTTCATGTTGGTTCTCGCAAAGGTGATATCAAACTGGTGAGAAAACTTCTCAAGGAAGGAACAG ATGTCAATGTGTCTGCAGGGGGCCCTAAATCAAAAGGGGTGACACCCCTCCACCTCGCTGCTGAAGGTGGTCACCTTGGA GTCATGGATGAACTGCTTGAGCGTGGTGCCAACATTGATGCCAGAACAAAAGGGGCTTGTGGCTGGACTCCACTTCACAT TGCAGCCAAAGAGAGGAGGAAGGATGCTGTGAAGTTCTTGATAGAGAATGGAGCTTTCTTGCCACCGGACATCAATGATT GCCGATTTAATCCTCCTCTTCATTACTGCCCAGGACTTGAATGGGCCTATGAAGAGATGAAGCGAATTCGACATGTAGAC TCATCTGCTGGGGAGACATCTTGCAGCTCTGAAAGTTAA
Protein sequence (LotjaGi2g1v0345000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIEEQPFELRKSPSRRRLLRPAVGTDDRGWTLLHVGSRKGDIKLVRKLLKEGTDVNVSAGGPKSKGVTPLHLAAEGGHLG VMDELLERGANIDARTKGACGWTPLHIAAKERRKDAVKFLIENGAFLPPDINDCRFNPPLHYCPGLEWAYEEMKRIRHVD SSAGETSCSSES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 172 | 163 | 2.4E-84 | – | |
| PANTHER | 10 | 172 | 163 | 2.4E-84 | – | |
| Gene3D | 16 | 167 | 152 | 1.1E-32 | ||
| SUPERFAMILY | 26 | 143 | 118 | 1.23E-27 | ||
| ProSiteProfiles | 28 | 60 | 33 | 11.354 | ||
| SMART | 28 | 57 | 30 | 0.0039 | ||
| ProSiteProfiles | 28 | 125 | 98 | 31.776 | ||
| Pfam | 33 | 125 | 93 | 8.7E-18 | ||
| ProSiteProfiles | 65 | 97 | 33 | 15.067 | ||
| SMART | 65 | 94 | 30 | 1.8E-6 | ||
| PRINTS | 66 | 81 | 16 | 7.1E-5 | ||
| SMART | 100 | 133 | 34 | 6.7E-5 | ||
| ProSiteProfiles | 100 | 125 | 26 | 10.927 | ||
| PRINTS | 116 | 130 | 15 | 7.1E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0345000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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