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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0350200 |
| Transcript ID | LotjaGi2g1v0350200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT4G19185.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q8W4R9|WTR35_ARATH WAT1-related protein At4g19185; TrEMBL-Plants: tr|I3SAS0|I3SAS0_LOTJA WAT1-related protein; Found in the gene: LotjaGi2g1v0350200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82676030..82683237) extracted from Lotus japonicus Gifu genome v1.2.
ATATGTTAGTGTGAACATAGAATAGATACCCACAAAAAATGAAGAGAATAGAGCAAAATAATTGATGTAATAAACAATAG GAGTGACAGATTGAGAGAAAAAATAGGTGTATATTATATGTCTGACTATCATTAGTTTTATATAAAATAAAAGAAATTGA AACTATGCATTTAAGTCTGTTTTTGCATGTGGTTGACTTGATGAATTTATGTGTGGTGTGATGTGAGTGTTGTGTGGGAA TTACATATACTTGAAATGGCAACACCTTCTTCTTCTTCAGGGTCAATGGGAGTTAAAGATACATGGAAGTCCCATTTGGG CTTGGCGATGGTGCAGCTATTCTATGGTGGCTACCATGTCATCACCAAAGTGGCCCTGAATGATGGGGTCAACCAACTTG TCTTCTGCTTCTACCGGGATCTCCTTGCCTTCTGCATTCTTGCTCCCATCGCTTTCTTCAAAGAAAGGCATGATATTTCT TCTTCCATTTTTTTCTTCCCTTTTCACCTTTCTTTCAACCCAGAACCGAACTAATTATCCACATGAATGGTTTTATATTA TTATTCGTGACACGCCCCCTCATGTAAGAGCCTGTTTTTGGGCTTTCATGTCTGTGCTCGAAGCGTGGATAATGCATTTT CTCATCTACTATGTGCTGAAATTCAACTTTTTATTAGAAGAATTGAGGTTATATATAGAGGCTCTGAAACATGAACTGAT TATGCTATATTTCAAAAGCCAAGGGCTGCTGTTTTGAGATATATATGTTTAATTGTGGGTTATCTTCTTATGAATGCACT AGGCACAATGGGTATAATACATATATATTTTTTTACCATTCTAGCCTGGGAAAGGGGGAATCCTAATTAAATTCAACTAT GCACTTTTTCTTCCTGCTAAATTTGAAGTATGCTTGGTATTTAATTACTGATGTAAAATGCCTTATTATTTAAAATCTGG TATTCTGGTTCTAGAAATGTTCTACTTATGCTTGATTGTTGCTAATGGTTCCATATCTGGCTTATTTTGGTTGATGGCAG CAAAGCATGAGTTATACCTGCTTTTTTCAATTAGATGAGCTACTCACTCAAGCTTAAGAATTGGAATTTTAACTCGAAAT TGGTTTCCTTCAATTTATTTCTGATGTGTGAGTATCCTAATCCTTGCTGACTGTAGACAAACAAGACCGCCTATTGATAA GAAGCTATTGATGTCATTCTTCTTTCTTGGATTAACAGGGTAAGGGTCTTGCTCCAGTTCATATTTTTGTTTTATATGAA ATACATAGTGTTCTGTTCATGCATATTATGTTTGTTTGATCAGGATATTTGGCAACCAGCTCTTGTTTCTCATTGGTTTA AGTTATACAAATCCAACTTATGCTTCTGCTGTACAGCCAGCCATTCCAGTTTTTACATTTCTGTTTACCGTGATAATGGA GTTAGTTTCACTTTTACCATTTTCTATCTGAGTGTTTTATGTATGTTGTTCATGAAAAGCACCAGAGAGACCGTACTAGG TCCATTTAGGGATGTCGTCAATAGATACGGATGGACATGAATAGTACATATATGCCGGCCACCCACCCGTGGGTAAAAAT GCACGCTCGTACCCCTTCCATACCCACATGAATATCCATTAAGTGGATTTTTAACGGGTTCAACAATATTCACGGGTATC CATGGTCACCCATGGATATATATTTGTCAATATTTATTAAAATACAAACTTAAGTAAAAGTACATTTAAGATAAATAAAG GATTTTGAAATTAGAACAATACTATAATACTAAAATTATTCAGTTCAGATACTCCAGGACATAAAGTAATGTGTAGCTTA ATATACTTATTCGTGCAGTACAGAAAGCGTGAACTTGCTCAGATGTGAAGGCCTGGCAAAGGTTGGAGGAACTGTTATCT GTGTTTCAGGTGCCATATTGATGGTTTTTTATCGTGGTCCAGCAGTCATAGGATATAGAGACGGGGGCCATGAAACACAA AGTGAAATCAGAGCCAGAGGTCAGACAGAGCCTTCTGGATGGTTAATCAGTGGTTTACAAGATCTTGGATTAGACCATTT TAAACTTGGTGTCATTTGCTTGATAGGGAACACTTTGTGCATGGCTGCTTTTCTAGCTTTTCAGGTATCTATTCTAGCTT TCGAATTTTCCTCTTCCCCCTTTTCCCTTCCAACAAAAAACACACTACAACAAAGCTTTGATGTTTTTCATTTGATTAAA CCAATCCTTTCATACAGGTTATCCCTTTTAATGACCTATTGCCAGAAGCACCAATTAGGGTCATTAAAATTCTCTTCATT AATAACATTAGTTAAGCTCACTCTACAACTTTTGTGAAGCAATTTATTGTGAACTTGTGATCCTAGATTCTTTTATTTGT GACATTGTCAGCGAGTTTTACTTGTGTCCATTAATTATTTTCAGGCACCAGTATTAAAAAAGTATCCTGCAAATCTCTCT GTCACAACATATTCATTCTTCTTTGGAGTTGTACTAATGGTGATAATGTCGTTGTTCATTACTGATGGACCGAGTGATTG GATTTTGACACAATCAGAAATACTTGCCGTTATTTATGCTGTGAGTCACTCAAAATTTCAAATCAATCTTCAATATCACG ACTCCTTATATTAGTCATTGCTATTGCGGATTCTCTGGTCCATTTTACTTCATGGAACTGTTATAGCCACCGTCATGCTT GACAAGTTAAAAAACCAAGTTTCTCTAAAGCATTCACAGGCATGAGGCATGTTTTGTAGCATCCAAGCAAGTTTGACACC ATCTAAGTTGCATGAACCGTGTAAGACCTGGATTTTCAGAACAAGCTAATTTCCGACTCACGCGTAGAATCAGTGTAAGC GTGACAGGAGTTTGATATTTGAGAAAGATTAATGAAGAAGAAAGTTCAGGAATTGCTTGAGGAATGTTGCGTAGTCATTT TAGGAATTAGAGCGAGTCGTCTGCACACCCGCCTTATGGCAAGCGTGTCCAGAATAGGCTAATTTCGCTTTAGAGCAACG TTTTAAGTGAGATTTCGAATCCTTGGGAAATTTAAAGATTTTCTTTATTTTTCCTTCGACCAGCGTTTCATTTCGGAACT CTAGACTGTACGCACGATAGTATTCACTTTTCGGAAGTCCGACGACGCTAATTTCCTTGCTTCGAAACCCTAGATTCGAG CGATGGATGAAGACTTTTTCTATTCGGGACTTCTAACGAAGTTTCCGTCCGCGCTGCCAGATTTGTTTCGACATTTCCAA TCTTTCTTCAGAAGGAAGTTTTGCCGTCTGAGCATCATAGCAAAAAGTAGTTTAACGGGACAGATTAACTTACACCGCCT TTGGGATTTTAGATATCGTTTTTCCCAAATCATAGATAATTGTTTTGAGTTCTGGAATTCTGACGCCAGAATCTCTCTTA GAATTCCTCGGTGGACGTGCTGCAAAAATCGGAATCGCGAAATTTTCATTTTCCCGCGATTTCACCTGCCTATAAATAGC TCGAAAAAGCAAAATCTCTTCATTCTCACCCATTCAAGGCCGCGAGCAAGGAGAGAGGAGGATAGGAGAAATTTTCGCGA AAACTTGACCAATCTTCGTGCAGTTCGTCCCTACTTCTAGGTATTGAGGTAACTAGCATGAATCCTACCTCTGTTTACTG TTTCTGTTGCGTTTCTGAAGTCGTTTCTGTGCTCACAGTTTTGAGCTTTTTCTAAAATTGTCCGATTTCCTTGATTTCTT GGTTGGGTTATGTTCCTTATGTTCCCATGAGTCTAAAACCTCTGTCAGTAATCGCCGATTGCGATTCAGTTGTCCAAGAT CTGAAAAATTGATTCAAAACCCCATTAGTCGCACATTTCGAAACTTTATTGTCGAAAAGCTGTAATCTGACTTCGTGCCT TTAGGATTTGTTGTCACGGATGTCATGAGGATCAATGCTGTCAAATTTGTTTTCCGAACTGATAACTTTGAAGTTTTGAG CCTTTATTTTGGACCAAAATGCCCCTGGATAGTCGTATTTCGACCCGATTGTCCGAAAATTGTTCCGACAATTTCTTTGC CTTAGTTTTACCCTAAAACTACCTTGTGAATTGATTTAGATCGAAGAAAAAGTTCGAAAACCCTATTTTCCATAGTGGCC GAAACCTAATTGCTTGGGTACCGTGTCCAAAAATAATTTTTGGGTCTCTATGACCTGAGCCATTGCGTAGCTCTTTCAAT TGTCGAAATTTTGGCGCCGGTTTCGTGTCATTCTGAGTTCTGTAGCTCGAGTTATGCTCGTTTTAGCGAACGAAGTCTCC GTTGTCAATTTGTGCCTAAATAGGAACTCTGAAGCTTTAGAGGCTTTCTTTACGATTTCGATTAGTATTAGTAGATCATG TTGCTCCTAGTGAAGCTTGTGTTGATGATTGTGTTTTCTTTGTTCTAGGTTCGCAATTTCCATGCCCAACTTCTACTCAC GAAGGTAAGGGTAACTCGGTTTTAGAGCGTCTTTGAGTCTTGCATGCTTTTATCGCACTGCCTGTGTTTGAGATGAAGAT GTTTATATTGATTGGCAGATGATTATGATTATTATGCTGAATTTGGAAAATGTTTTCTGAGAGGCTTCGGCCGTTTACTG GTTTCTGTCGTTACTGCTTCCTAGTGGATGGAACATGTGGTTACTTTGGATTGGTCCTTGGGTGGGCTTTGTTATTGTCT GACTTGGCATATAGGGCTTGAGTCAAGTGGCGATGAGGAGGTGTGTCCTATCATTGTCCCATCTTGCGAGATGCTAAGTG GCGATCAGGAGGTGTGTCCTATGATTGTCCCGTCTTGTGTGACGTTAAGTGGCGATTAGGAGGTGTGTCCTATGATTGTC CCGTCATGTATGACGTTATAAGTGGCGATGAGGAGGTGTGTCCTATCATTGTCCCGTCTTGAGAGACGATATTGATCGAT CCATTTTGTTAGCAGCATATAGTTGCATTATAGGGAACTAACACCTGACCCTATGTTGTTGGATTTTCGTATTGGTTTAT TGATATCTGATTTGATGTTACATTGTTGAGGTTATTATTATCTGAGTCCGATTTATGTTTAAGTTGTTGATATATGAGTT GAGTTATGTTGCTAGTTATTTACCATGCCAGGTAATTAAATTCGAACAGCATGATTTTTCTCTTTTATACATGGTAATTG CATGGAGTTAACCCTTTCTATTTGCTACTTGTTGTTTGGGCGCTTAACGCTATTAGGCGATGGAGATCCTTCCGCCGAGG CATAGCTACTCGAGTTGGAGATCGAGTTGTAAGCGGTGGAGTAGAGGTATGAGAAGCAGCTTTGCTTCTCTTCTTGTGGA TTATGTTGGAGTCTCTTTTACTTTATGAGAACTCTGTTATTAAAGTCTTGCTTCCGCCACTGTTAAAGTGCGCATGTTTA TTCTGAACCTTACTTATGGTATTGTAAACTATTATTACTGTATATCGGGAAACAAGTTATCTAAATAAAGTTATGGTATG TTTCCAACCTTTTAGCCGAAGTGTTTAGTTGTTTTACAGAAAAAAAATTCCCTTGGTTTTTAGGGATTGCAGATTGGTCC TTAGACTTTGTTAGGTTACTAATGTGACTCTTTAGTTGAGAAATTGGGGTGTTACAAACCGCTAGATAGGCTACCTTTTA GTTGCATATATAAGAAACTAAAGTTGACATTTCCCTTATCTATAGTTGAGAAAATATGATGGGAGCAGTAACAGTTTTAT TTTTTTAAAGTTGTAATAGTTGAGAATGAGATGGAAGCAGCAATAGCTGAGAATAAGATAGGATTTAGCTGTTATGGTTC AGCTATTTGTACTGTCTTGTGAAGCAAAATGGAGGGAATAAATAATTTGCAGTGTCTTGCACAAAGTCAAAGAGTACATT AATATGTCATCGAAAATTGTATTTAGGTAATGTACCTGAGGCAGTGAACTAAGAAATGAAAGCTACTGGAGTAAAGCAAA GAGGTCTTTTTTTAATGGAGGAAAAGATTGAAAGTATCCTATGTTCTAATTGATTATTTTGGTGGAGTTTTAACATGTGG ACTGTGACTTTCCTTATTTACTCAGGGAACTATTGCATCTGCTCTTAATTATGGAATCATGACATGGAGCAACAAGATCT TAGGGCCAGCTTTGGTTGCTCTTTACATGCCACTTCAACCTCTTTTTTCTTCTGTAATGTCCCAGATTTTCCTTGGAAGT CAAATATACATGGGAAGGTATAGCTCCTATTACTTTCAGTTATTGATTCATTTTGTTCCAACTTCTCAAATGGACATTTA AAAGTTTCCAACTACCAATAACAAAGTATAAGACATTAAGAATGAGAAATTGCAATCCATCACTTGCTTAGGACTTAATA AAATGTCTTATGACTCTTATCTAGTTGAATTTGATAAAGTTCTTTCATGCATTCTAAAATTATTTTATTTCAGAAAATCT TATTATTCTTGGTCTTTTTTTCCGTGTGATGACAGTATTATAGGGGGATCTTTTATCATTGCTGGTCTATTTGTGGTTAC TTGGGCCTCCTATAGAGAAAGACAGGCAACTGCTGGAGTTACACCTGGTTCTTGGGTCTCTGAACCACTTCTTCATGGAA AAATTGCAGATCATATAGACCACCTCTTTTCGGGGTCCTCTAGCGTATCCCCGAACCCAAAGTCCTCAGATTAACATGTT TGGATTCACTTTTAAGTTTGTGAGAATCACACTTCTGCCTTCATGAAAACTAGGCATAATAGCTTCTTTCAGAATCACTT CTTTCCGAATGAGGAAATCCATCGTGTTTCCAAGCACACCATAGGAAAATAAATTACAGAATGCCAACAAGGCTTTGTAA ATATTGGTCTTGTGATTCTTCAATCTGTTATTGCTATCATTTTAATTGGAAACTCAATACTTGATGAAGTATATATATGT GGAGTGTTTGTTTGAGCAAAAACTTTTATTAAAATGCTTCAAGAAGTTATATGAAAGTAATCATTGAATTCGATTCATCT AGTGCTATTAGACTTGTAGTCATTGGGTGCAAAACTGCAAATCCACACATTCATGTTGTACTCTTGTAAATCACATTAAA GAACTCAACAAGGATCCTCTTAGGACCTAAACTCATTGCAGCTCAGCTCGCATTGGACCTAGTAGAATTTCAGGTTGGGT TATATTAG
CDS sequence (LotjaGi2g1v0350200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATTCTTCTTTCTTGGATTAACAGGTACAGAAAGCGTGAACTTGCTCAGATGTGAAGGCCTGGCAAAGGTTGGAGG AACTGTTATCTGTGTTTCAGGTGCCATATTGATGGTTTTTTATCGTGGTCCAGCAGTCATAGGATATAGAGACGGGGGCC ATGAAACACAAAGTGAAATCAGAGCCAGAGGTCAGACAGAGCCTTCTGGATGGTTAATCAGTGGTTTACAAGATCTTGGA TTAGACCATTTTAAACTTGGTGTCATTTGCTTGATAGGGAACACTTTGTGCATGGCTGCTTTTCTAGCTTTTCAGGCACC AGTATTAAAAAAGTATCCTGCAAATCTCTCTGTCACAACATATTCATTCTTCTTTGGAGTTGTACTAATGGTGATAATGT CGTTGTTCATTACTGATGGACCGAGTGATTGGATTTTGACACAATCAGAAATACTTGCCGTTATTTATGCTGGAACTATT GCATCTGCTCTTAATTATGGAATCATGACATGGAGCAACAAGATCTTAGGGCCAGCTTTGGTTGCTCTTTACATGCCACT TCAACCTCTTTTTTCTTCTGTAATGTCCCAGATTTTCCTTGGAAGTCAAATATACATGGGAAGTATTATAGGGGGATCTT TTATCATTGCTGGTCTATTTGTGGTTACTTGGGCCTCCTATAGAGAAAGACAGGCAACTGCTGGAGTTACACCTGGTTCT TGGGTCTCTGAACCACTTCTTCATGGAAAAATTGCAGATCATATAGACCACCTCTTTTCGGGGTCCTCTAGCGTATCCCC GAACCCAAAGTCCTCAGATTAA
Protein sequence (LotjaGi2g1v0350200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFFFLGLTGTESVNLLRCEGLAKVGGTVICVSGAILMVFYRGPAVIGYRDGGHETQSEIRARGQTEPSGWLISGLQDLG LDHFKLGVICLIGNTLCMAAFLAFQAPVLKKYPANLSVTTYSFFFGVVLMVIMSLFITDGPSDWILTQSEILAVIYAGTI ASALNYGIMTWSNKILGPALVALYMPLQPLFSSVMSQIFLGSQIYMGSIIGGSFIIAGLFVVTWASYRERQATAGVTPGS WVSEPLLHGKIADHIDHLFSGSSSVSPNPKSSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 2 | 255 | 254 | 7.0E-121 | ||
| PANTHER | 2 | 255 | 254 | 7.0E-121 | – | |
| Phobius | 21 | 41 | 21 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 42 | 83 | 42 | - | – | |
| Phobius | 84 | 104 | 21 | - | – | |
| Pfam | 86 | 223 | 138 | 6.7E-15 | ||
| TMHMM | 87 | 109 | 23 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| TMHMM | 116 | 138 | 23 | - | – | |
| Phobius | 116 | 137 | 22 | - | – | |
| SUPERFAMILY | 123 | 228 | 106 | 1.02E-10 | – | |
| Phobius | 138 | 148 | 11 | - | – | |
| Phobius | 149 | 168 | 20 | - | – | |
| TMHMM | 151 | 168 | 18 | - | – | |
| Phobius | 169 | 174 | 6 | - | – | |
| TMHMM | 175 | 194 | 20 | - | – | |
| Phobius | 175 | 198 | 24 | - | – | |
| Phobius | 199 | 203 | 5 | - | – | |
| Phobius | 204 | 225 | 22 | - | – | |
| TMHMM | 204 | 226 | 23 | - | – | |
| Phobius | 226 | 273 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0350200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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