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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0359200 |
| Transcript ID | LotjaGi2g1v0359200.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine-zipper protein; TAIR: AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q9SE43|REV_ARATH Homeobox-leucine zipper protein REVOLUTA; TrEMBL-Plants: tr|I1LL54|I1LL54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0359200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:85648308..85652748) extracted from Lotus japonicus Gifu genome v1.2.
CCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCACAAAGTTGCAGTGGAGTGGCAGCCCGAGCCTGTGGTCTTGTTAG TTTAGAACCTACAAAGGTGAACTTACCCTTTTAAATAAGTGAAATTATGGTTTTACAAAATTTTTTGTCCTTTCTTGGTA TGCAAGTTGAGCTCTGTAAGATGTTTGAATTTCTGAATCCCTTAATTTTCAATAGATTGCAGAGATCCTTAAAGATCGTC CATCTTGGTTTCGGGAGTGTCGAAGCCTAGAAGTTTTCACAATGTTTCCTGCAGGAAATGGAGGAACCATAGAGCTTGTC TACACTCAGGTGAGCTTCAAATGTTAAATTTGACAATTCTGTTGTTTTATTCACCCCTGTGAGTAAACTTTAAAATTGCT ACAGACGTATGCTCCCACAACACTGGCTCCTGCCCGGGATTTTTGGACTCTTAGATACACTTCAAGTTTGGACAATGGCA GTCTTGTGGTGAGTATTATTATGCATAGATTTTTTGAAGTCTACCTTTGAAGGGAGATAGGTTAGTCTGCTTTGCTCATG TGTGAAATCTAATTCCACTTTTAAAGGTTTGTGAGAGGTCTCTGTCTGGTTCTGGCTCGCGCCCAAATCCTGCTGCTGCG GCTCAGTTTGTAAGGGCTGAAATGCTCCCTAGTGGCTACTTGATTCGACCGTGTGATGGTGGAGGGTCAATTATCCACAT TGTTGACCACCTAAATCTTGAGGTTCGACTTCTTAACTATGAACTAATGTATATTTGTATTCCTTTCTATGTGCATTAAT TTCTTTATTGTTTTCTTCTAGGCATGGAGTGTGCCAGAAGTGTTGCGACCACTTTATGAATCATCGAAGGTCGTAGCTCA GAAAATGACAATTGCGGTACGTTCACTGTTGTTCATTCATAAAATAGGGCTGCAAAAATTGGTTGACCAATCTTATTATT CTGAACATTGTGCAAGGTGAACCAGTCTCTTAGAAGTTGAATCTAAGTTTCTGGCATTAAAATCTTTGGATTACATGTTT GCATATCTTTTTTCTTTCTTCTTTTTAAGTTTTGTCATTCTTTATTTCAAATTTAATGAGCACTTCACTTGTTTTCTGGA CATATCTTCACTCAATGTGATTCCCACCTTCTATGCCTTCCTCTAAGAAGATAGGTATTAATCTGATAGATTTTGTGACA GGCGCTCCGATATATCAGGCAAATAGCTCAAGAAACAAGCGGTGAAGTGGTATATGGATTGGGTAGGCAGCCTGCTGTTC TGCGAACCTTCAGCCAAAGATTAAGCAGGTAGCTACATGAAACAGTTTGTTTCCTTGTATTCTATTTTTGCCTGCTTCTA GAGTAATAATTTTTACGCTCTCATCTCTGATTCACTTTGAACTTTTTTGGTTGTAAATTGATGCATTACACTTACAGAGG GTTCAATGATGCTGTAAATGGATTCAATGACGATGGTTGGACTGTACTGAACTGTGAGGGTGCTGAGGATGTAATCATTG CCGTTAATTCGACAAAAAATTTGAGCAGCACTTCTAATCCAGCAAATTCCCTCACATTCCTCGGAGGAATTCTCTGTGCC AAAGCTTCTATGTTGATCCAAGTGAGTCTTGAGAACTCAATGTCATGATACTTTTCTATATTATTGTTTTTGGAATGCTA GTTTTTAATGATTCTAAGATAAGGACATGTTATGTAGAACACCTTTGTAGCGGCTACTTCCCCTTTTTGTAAATGGATCT CATATAGTGTCCTTTGCAATTGCATCATATGGTGTTTGTTAACAAGTAAAACTATTCCATGGTAGGTTGTTTGCCAATAA AATTCTTCGGCAAAAGATATTTCACTCATATGCTCATGGACACAGAAGTTGATCCTGCCTTGTATATAGCTAGCATTCAC CTCTTTGAAATGTTGTGTAACAAGTCATAATACTGCTTTACTTGCAGAATGTCCCACCTGCCGTTTTGGTTCGCTTTTTG AGGGAGCACCGGTCGGAATGGGCTGATTTCAATGTTGATGCTTATTCAGCTGCATCACTGAAAGCTGGCACCTATGCCTA TCCTGGGATGAGGCCTACAAGGTTCACTGGAAGTCAAATAATCATGCCTCTCGGCCATACAATTGAACATGAAGAGGTAT ATTTGCATTCCCTTGCCCATACAAATGCCAGATTGAAATGTCTTCACTTTTTCAAGGAATCCATTAGAGATTTTGGGTAG CATGGCGAGTTATTTGTCAATCCTAAGATAGTGACTGCATATTTACTTTGTGCCGGGATGTTTTTAACATGTATGTGAAC TGCATGTTATGCTATCCAGTCATTTAAAACACCTGTACTTTCAAACAACATTCTTGATGAAGTTGTGTCTGCATTCCAGA TGCTAGAAGTCATTAGACTTGAAGGCCACTCTATAGCTCAAGAAGACGCATTTGTTTCAAGAGACATTCATCTCTTACAG GTGATGCCTTGGATTCTTTTTAAAATGTTGTACATCATCTGTATTCACCTCTTTTTTACTTAAGCTGAGTCGTGTGAAGT GTGAATATATGATTTCTAGTACAAATTGCTATTTGTTACAAAGGATGTAACGATATTTAGCATATCTTGGAAAAGTTTAG GTTTACAAATTACAAGAATGTGGTCAATATAGAGTTATGTACTAACTACCAAGGTACTTTCTTTTTGGGTGCAGATATGT AGTGGAATTGATGAGAATGCAGTGGGGGCTTACTCCGAGCTCATATTTGCTCCAATCGATGAAATGTTCCCAGATGATGC TCCATTAGTTCCCTCTGGTTTCCGCATCATCCCATTGGATTCAAAACCAGTTGAGTTTTGCTCTTCTGTATTTTCTGTAA CGAGCTATTTTTTCATCTTATTCCCTGTAGTACGCTAAAATGGATTTCAGAGTTCAGATTACTTAATTTCATGTTCTTAC CTAGAAAGTCAGGAATCTCTCTGGTGTTAGAGTGTGGAATTTGTATTCAAACAATGACTATAATTTGAATGTTTGCTAGT TAGAATTGATGAACTGTTACTTATGTCCATGTATGGTTCCCTGTTGTGATGTTATTATGTTCATGTTTTAGGGTGATAAA AAGGACGCAATGAATTCAAATCGGACGCTGGATTTGACATCTGGTTTTGAAGTGGCTCCAGCAACAACTCATGGTGCAGA TGCATCATCTAGTCACAACAGATCAGTTTTGACGATTGCCTTCCAGTTCCCGTTTGACAGCAGTTTGCAAGATAATGTTG CAGTCATGGCACGCCAATATGTTCGCAGCGTGATTTCCTCCGTGCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATA AACCCAACTGCTGGATCAAAACTTTCTCCTGGTTCTCCAGAAGCAGTTACACTAGCTCAATGGATCTGTCAGAGCTATAG GCAAGTCTACTTATCTCTTTCTATCTAGAAATTGATACAAGCATGCTACAATAAGTTGATTAAATGGGTGTTTGAAATTC CTTTAATTATTGATTATGAAGTCAGAATCAATTCTGGGAATAAGCTTGTGTCATGTGTGAGTAGCTTTTCTATTTCAAAA TTGATTTTGATGAGAGAAACTGATCCGAACATGCGAGAAGAGGGTTGAGCATTATGTAGTGTAACAATTTGATTTTCTTC TGTCATGGTGTTCGCCTTGTATCAAATGATTCACATTGGTATGTCTAATATTTCTGCCTTTCTCTGTTCTCCAATTTCAG TTACTATTTGGGGACAGACTTGCTGAGATCAGATTCTCTTGTTGGAGATATGATGCTGAAACATCTGTGGCATCATCAGG ATGCTGTTCTATGCTGTTCACTGAAGGTACGTTTGTGATTTCATTTCATCTCTCACAATGGAGGTAATGTGATCTTTTTG TTCATTAAGGTAGTTAAGAATTGTATGTGTGCTTGATATCCCTCTAATGCTTGTCACGCGAGATTAATGTGATTTTCCAT TTGGTATTGTTCAGTCACTGCCTGTGTTCATCTTTGCAAACCAAGCTGGCCTTGACATGTTGGAAACAACGCTAGTGGCC TTACAAGACATCACATTGGATAAAATATTTGATGAGTCTGGACGCAAGGCATTGTTTGCAGACTTTGCTAAGTTAATGCA GCAGGTGATTTCAAGAACAAAAACGCATTTAAATACTAACATATTTATGCTAAAAAAAGAGACTATAAACCTAGGCTTTC ATTTAGAAAATGGCTGAAAATTTTCATTTTTCATCATTGTTCCATCAGGGGTTTGCTTATCTGCCAGCTGGGATCTGCAT GTCCACGATGGGGCGGCATGTTTCATATGAGCAAGCCATTGCATGGAAAGTGCTTACTGCAGAAGATAACAACACTGTTC ACTGCTTAGCTTTCACTTTCATAAATTGGTCATTTGTATGA
CDS sequence (LotjaGi2g1v0359200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCCCTAGTGGCTACTTGATTCGACCGTGTGATGGTGGAGGGTCAATTATCCACATTGTTGACCACCTAAATCTTGA GGCATGGAGTGTGCCAGAAGTGTTGCGACCACTTTATGAATCATCGAAGGTCGTAGCTCAGAAAATGACAATTGCGGCGC TCCGATATATCAGGCAAATAGCTCAAGAAACAAGCGGTGAAGTGGTATATGGATTGGGTAGGCAGCCTGCTGTTCTGCGA ACCTTCAGCCAAAGATTAAGCAGAGGGTTCAATGATGCTGTAAATGGATTCAATGACGATGGTTGGACTGTACTGAACTG TGAGGGTGCTGAGGATGTAATCATTGCCGTTAATTCGACAAAAAATTTGAGCAGCACTTCTAATCCAGCAAATTCCCTCA CATTCCTCGGAGGAATTCTCTGTGCCAAAGCTTCTATGTTGATCCAAAATGTCCCACCTGCCGTTTTGGTTCGCTTTTTG AGGGAGCACCGGTCGGAATGGGCTGATTTCAATGTTGATGCTTATTCAGCTGCATCACTGAAAGCTGGCACCTATGCCTA TCCTGGGATGAGGCCTACAAGGTTCACTGGAAGTCAAATAATCATGCCTCTCGGCCATACAATTGAACATGAAGAGATGC TAGAAGTCATTAGACTTGAAGGCCACTCTATAGCTCAAGAAGACGCATTTGTTTCAAGAGACATTCATCTCTTACAGATA TGTAGTGGAATTGATGAGAATGCAGTGGGGGCTTACTCCGAGCTCATATTTGCTCCAATCGATGAAATGTTCCCAGATGA TGCTCCATTAGTTCCCTCTGGTTTCCGCATCATCCCATTGGATTCAAAACCAGGTGATAAAAAGGACGCAATGAATTCAA ATCGGACGCTGGATTTGACATCTGGTTTTGAAGTGGCTCCAGCAACAACTCATGGTGCAGATGCATCATCTAGTCACAAC AGATCAGTTTTGACGATTGCCTTCCAGTTCCCGTTTGACAGCAGTTTGCAAGATAATGTTGCAGTCATGGCACGCCAATA TGTTCGCAGCGTGATTTCCTCCGTGCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAACCCAACTGCTGGATCAA AACTTTCTCCTGGTTCTCCAGAAGCAGTTACACTAGCTCAATGGATCTGTCAGAGCTATAGTTACTATTTGGGGACAGAC TTGCTGAGATCAGATTCTCTTGTTGGAGATATGATGCTGAAACATCTGTGGCATCATCAGGATGCTGTTCTATGCTGTTC ACTGAAGTCACTGCCTGTGTTCATCTTTGCAAACCAAGCTGGCCTTGACATGTTGGAAACAACGCTAGTGGCCTTACAAG ACATCACATTGGATAAAATATTTGATGAGTCTGGACGCAAGGCATTGTTTGCAGACTTTGCTAAGTTAATGCAGCAGGGG TTTGCTTATCTGCCAGCTGGGATCTGCATGTCCACGATGGGGCGGCATGTTTCATATGAGCAAGCCATTGCATGGAAAGT GCTTACTGCAGAAGATAACAACACTGTTCACTGCTTAGCTTTCACTTTCATAAATTGGTCATTTGTATGA
Protein sequence (LotjaGi2g1v0359200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLR TFSQRLSRGFNDAVNGFNDDGWTVLNCEGAEDVIIAVNSTKNLSSTSNPANSLTFLGGILCAKASMLIQNVPPAVLVRFL REHRSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSIAQEDAFVSRDIHLLQI CSGIDENAVGAYSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAMNSNRTLDLTSGFEVAPATTHGADASSSHN RSVLTIAFQFPFDSSLQDNVAVMARQYVRSVISSVQRVAMAISPSGINPTAGSKLSPGSPEAVTLAQWICQSYSYYLGTD LLRSDSLVGDMMLKHLWHHQDAVLCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALFADFAKLMQQG FAYLPAGICMSTMGRHVSYEQAIAWKVLTAEDNNTVHCLAFTFINWSFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 508 | 508 | 4.1E-273 | – | |
| SUPERFAMILY | 1 | 62 | 62 | 2.2E-5 | – | |
| PANTHER | 1 | 508 | 508 | 4.1E-273 | – | |
| ProSiteProfiles | 1 | 69 | 69 | 10.784 | ||
| Pfam | 1 | 58 | 58 | 3.2E-12 | ||
| Pfam | 384 | 528 | 145 | 2.1E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi2g1v0359200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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