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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0359200 |
| Transcript ID | LotjaGi2g1v0359200.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine-zipper protein; TAIR: AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein; Swiss-Prot: sp|Q9SE43|REV_ARATH Homeobox-leucine zipper protein REVOLUTA; TrEMBL-Plants: tr|A0A151TN97|A0A151TN97_CAJCA Homeobox-leucine zipper protein REVOLUTA; Found in the gene: LotjaGi2g1v0359200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:85648308..85653740) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTATGGCTGTGGCTCAACATAGAGGTGAAAGCAGCAGCAGTGGTAGCATTGATAAGCACCTTGATGGTGGGAAATA TGTGAGGTACACTGCTGAACAAGTTGAGGCTCTTGAAAGGGTTTATGCTGAGTGCCCCAAGCCTAGTTCCCTCAGGAGAC AGCAACTTATCAGAGAGTGTCCTATTCTTTCCAACATTGAGCCTAAGCAAATCAAGGTTTGGTTTCAGAATCGCAGGTAA AGCTTCACATCTTGTAGATTTTCAGAAGTTTTTTTTTGTGATTATGGGGGTTCGTGAAATCAGGACTTAGATGTTTTGGT CTTGCAGGTGTAGAGAGAAGCAGAGAAAAGAGGCTTCAAGGCTTCAGACGGTGAACCGAAAACTCTCAGCAATGAACAAG TTGTTGATGGAGGAAAATGATCGGTTGCAGAAACAGGTATCACAGCTTGTATGCGAGAATGGGTTCATGCGGCAACAATT GCACACTGTAAGTTGATATTAATGGCTTTTGTATATTTTATGTCATGATGTGATGAAATTAAGTGCAGTTGATTTGGTTG TTTGATCTCTGCAGACACCAGGAGCAAACACTGATGCTAGTTGTGATTCGGTGGTTACTACTCCTCAACATACCATGAGA GATGCTAATAACCCTGCTGGGTAATTTTGAGGCTCATGAAGTGAACTTTATGCTTTTTTTATCATGAAGTTTTCCATAAT TAGTTTTTTCTATCATGATCTTTGCAGACTCCTATCAATTGCAGAGGAGACTTTGACAGAGTTCCTTTCAAAGGCTACAG GAACTGCTGTAGATTGGGTCCAGTTGCCTGGGATGAAGGTTTTTTTCTTTTTTAATTCCTAATTGTAATGATCGTGGCTT CAAGGAGATAATTATTATCTATTTCATGATGATACTTTGCTGATTTGAATACAAATTAAAAAGTTTCTTCTACTGAAGTC ACTAATTATCTATATTCAATTTTTTTTGTCAGCCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCACAAAGTTGCAGT GGAGTGGCAGCCCGAGCCTGTGGTCTTGTTAGTTTAGAACCTACAAAGGTGAACTTACCCTTTTAAATAAGTGAAATTAT GGTTTTACAAAATTTTTTGTCCTTTCTTGGTATGCAAGTTGAGCTCTGTAAGATGTTTGAATTTCTGAATCCCTTAATTT TCAATAGATTGCAGAGATCCTTAAAGATCGTCCATCTTGGTTTCGGGAGTGTCGAAGCCTAGAAGTTTTCACAATGTTTC CTGCAGGAAATGGAGGAACCATAGAGCTTGTCTACACTCAGGTGAGCTTCAAATGTTAAATTTGACAATTCTGTTGTTTT ATTCACCCCTGTGAGTAAACTTTAAAATTGCTACAGACGTATGCTCCCACAACACTGGCTCCTGCCCGGGATTTTTGGAC TCTTAGATACACTTCAAGTTTGGACAATGGCAGTCTTGTGGTGAGTATTATTATGCATAGATTTTTTGAAGTCTACCTTT GAAGGGAGATAGGTTAGTCTGCTTTGCTCATGTGTGAAATCTAATTCCACTTTTAAAGGTTTGTGAGAGGTCTCTGTCTG GTTCTGGCTCGCGCCCAAATCCTGCTGCTGCGGCTCAGTTTGTAAGGGCTGAAATGCTCCCTAGTGGCTACTTGATTCGA CCGTGTGATGGTGGAGGGTCAATTATCCACATTGTTGACCACCTAAATCTTGAGGTTCGACTTCTTAACTATGAACTAAT GTATATTTGTATTCCTTTCTATGTGCATTAATTTCTTTATTGTTTTCTTCTAGGCATGGAGTGTGCCAGAAGTGTTGCGA CCACTTTATGAATCATCGAAGGTCGTAGCTCAGAAAATGACAATTGCGGTACGTTCACTGTTGTTCATTCATAAAATAGG GCTGCAAAAATTGGTTGACCAATCTTATTATTCTGAACATTGTGCAAGGTGAACCAGTCTCTTAGAAGTTGAATCTAAGT TTCTGGCATTAAAATCTTTGGATTACATGTTTGCATATCTTTTTTCTTTCTTCTTTTTAAGTTTTGTCATTCTTTATTTC AAATTTAATGAGCACTTCACTTGTTTTCTGGACATATCTTCACTCAATGTGATTCCCACCTTCTATGCCTTCCTCTAAGA AGATAGGTATTAATCTGATAGATTTTGTGACAGGCGCTCCGATATATCAGGCAAATAGCTCAAGAAACAAGCGGTGAAGT GGTATATGGATTGGGTAGGCAGCCTGCTGTTCTGCGAACCTTCAGCCAAAGATTAAGCAGGTAGCTACATGAAACAGTTT GTTTCCTTGTATTCTATTTTTGCCTGCTTCTAGAGTAATAATTTTTACGCTCTCATCTCTGATTCACTTTGAACTTTTTT GGTTGTAAATTGATGCATTACACTTACAGAGGGTTCAATGATGCTGTAAATGGATTCAATGACGATGGTTGGACTGTACT GAACTGTGAGGGTGCTGAGGATGTAATCATTGCCGTTAATTCGACAAAAAATTTGAGCAGCACTTCTAATCCAGCAAATT CCCTCACATTCCTCGGAGGAATTCTCTGTGCCAAAGCTTCTATGTTGATCCAAGTGAGTCTTGAGAACTCAATGTCATGA TACTTTTCTATATTATTGTTTTTGGAATGCTAGTTTTTAATGATTCTAAGATAAGGACATGTTATGTAGAACACCTTTGT AGCGGCTACTTCCCCTTTTTGTAAATGGATCTCATATAGTGTCCTTTGCAATTGCATCATATGGTGTTTGTTAACAAGTA AAACTATTCCATGGTAGGTTGTTTGCCAATAAAATTCTTCGGCAAAAGATATTTCACTCATATGCTCATGGACACAGAAG TTGATCCTGCCTTGTATATAGCTAGCATTCACCTCTTTGAAATGTTGTGTAACAAGTCATAATACTGCTTTACTTGCAGA ATGTCCCACCTGCCGTTTTGGTTCGCTTTTTGAGGGAGCACCGGTCGGAATGGGCTGATTTCAATGTTGATGCTTATTCA GCTGCATCACTGAAAGCTGGCACCTATGCCTATCCTGGGATGAGGCCTACAAGGTTCACTGGAAGTCAAATAATCATGCC TCTCGGCCATACAATTGAACATGAAGAGGTATATTTGCATTCCCTTGCCCATACAAATGCCAGATTGAAATGTCTTCACT TTTTCAAGGAATCCATTAGAGATTTTGGGTAGCATGGCGAGTTATTTGTCAATCCTAAGATAGTGACTGCATATTTACTT TGTGCCGGGATGTTTTTAACATGTATGTGAACTGCATGTTATGCTATCCAGTCATTTAAAACACCTGTACTTTCAAACAA CATTCTTGATGAAGTTGTGTCTGCATTCCAGATGCTAGAAGTCATTAGACTTGAAGGCCACTCTATAGCTCAAGAAGACG CATTTGTTTCAAGAGACATTCATCTCTTACAGGTGATGCCTTGGATTCTTTTTAAAATGTTGTACATCATCTGTATTCAC CTCTTTTTTACTTAAGCTGAGTCGTGTGAAGTGTGAATATATGATTTCTAGTACAAATTGCTATTTGTTACAAAGGATGT AACGATATTTAGCATATCTTGGAAAAGTTTAGGTTTACAAATTACAAGAATGTGGTCAATATAGAGTTATGTACTAACTA CCAAGGTACTTTCTTTTTGGGTGCAGATATGTAGTGGAATTGATGAGAATGCAGTGGGGGCTTACTCCGAGCTCATATTT GCTCCAATCGATGAAATGTTCCCAGATGATGCTCCATTAGTTCCCTCTGGTTTCCGCATCATCCCATTGGATTCAAAACC AGTTGAGTTTTGCTCTTCTGTATTTTCTGTAACGAGCTATTTTTTCATCTTATTCCCTGTAGTACGCTAAAATGGATTTC AGAGTTCAGATTACTTAATTTCATGTTCTTACCTAGAAAGTCAGGAATCTCTCTGGTGTTAGAGTGTGGAATTTGTATTC AAACAATGACTATAATTTGAATGTTTGCTAGTTAGAATTGATGAACTGTTACTTATGTCCATGTATGGTTCCCTGTTGTG ATGTTATTATGTTCATGTTTTAGGGTGATAAAAAGGACGCAATGAATTCAAATCGGACGCTGGATTTGACATCTGGTTTT GAAGTGGCTCCAGCAACAACTCATGGTGCAGATGCATCATCTAGTCACAACAGATCAGTTTTGACGATTGCCTTCCAGTT CCCGTTTGACAGCAGTTTGCAAGATAATGTTGCAGTCATGGCACGCCAATATGTTCGCAGCGTGATTTCCTCCGTGCAGA GGGTTGCCATGGCTATATCTCCATCTGGTATAAACCCAACTGCTGGATCAAAACTTTCTCCTGGTTCTCCAGAAGCAGTT ACACTAGCTCAATGGATCTGTCAGAGCTATAGGCAAGTCTACTTATCTCTTTCTATCTAGAAATTGATACAAGCATGCTA CAATAAGTTGATTAAATGGGTGTTTGAAATTCCTTTAATTATTGATTATGAAGTCAGAATCAATTCTGGGAATAAGCTTG TGTCATGTGTGAGTAGCTTTTCTATTTCAAAATTGATTTTGATGAGAGAAACTGATCCGAACATGCGAGAAGAGGGTTGA GCATTATGTAGTGTAACAATTTGATTTTCTTCTGTCATGGTGTTCGCCTTGTATCAAATGATTCACATTGGTATGTCTAA TATTTCTGCCTTTCTCTGTTCTCCAATTTCAGTTACTATTTGGGGACAGACTTGCTGAGATCAGATTCTCTTGTTGGAGA TATGATGCTGAAACATCTGTGGCATCATCAGGATGCTGTTCTATGCTGTTCACTGAAGGTACGTTTGTGATTTCATTTCA TCTCTCACAATGGAGGTAATGTGATCTTTTTGTTCATTAAGGTAGTTAAGAATTGTATGTGTGCTTGATATCCCTCTAAT GCTTGTCACGCGAGATTAATGTGATTTTCCATTTGGTATTGTTCAGTCACTGCCTGTGTTCATCTTTGCAAACCAAGCTG GCCTTGACATGTTGGAAACAACGCTAGTGGCCTTACAAGACATCACATTGGATAAAATATTTGATGAGTCTGGACGCAAG GCATTGTTTGCAGACTTTGCTAAGTTAATGCAGCAGGTGATTTCAAGAACAAAAACGCATTTAAATACTAACATATTTAT GCTAAAAAAAGAGACTATAAACCTAGGCTTTCATTTAGAAAATGGCTGAAAATTTTCATTTTTCATCATTGTTCCATCAG GGGTTTGCTTATCTGCCAGCTGGGATCTGCATGTCCACGATGGGGCGGCATGTTTCATATGAGCAAGCCATTGCATGGAA AGTGCTTACTGCAGAAGATAACAACACTGTTCACTGCTTAGCTTTCACTTTCATAAATTGGTCATTTGTATGA
CDS sequence (LotjaGi2g1v0359200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATGGCTGTGGCTCAACATAGAGGTGAAAGCAGCAGCAGTGGTAGCATTGATAAGCACCTTGATGGTGGGAAATA TGTGAGGTACACTGCTGAACAAGTTGAGGCTCTTGAAAGGGTTTATGCTGAGTGCCCCAAGCCTAGTTCCCTCAGGAGAC AGCAACTTATCAGAGAGTGTCCTATTCTTTCCAACATTGAGCCTAAGCAAATCAAGGTTTGGTTTCAGAATCGCAGGTGT AGAGAGAAGCAGAGAAAAGAGGCTTCAAGGCTTCAGACGGTGAACCGAAAACTCTCAGCAATGAACAAGTTGTTGATGGA GGAAAATGATCGGTTGCAGAAACAGGTATCACAGCTTGTATGCGAGAATGGGTTCATGCGGCAACAATTGCACACTACAC CAGGAGCAAACACTGATGCTAGTTGTGATTCGGTGGTTACTACTCCTCAACATACCATGAGAGATGCTAATAACCCTGCT GGACTCCTATCAATTGCAGAGGAGACTTTGACAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTAGATTGGGTCCAGTT GCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCACAAAGTTGCAGTGGAGTGGCAGCCCGAGCCT GTGGTCTTGTTAGTTTAGAACCTACAAAGATTGCAGAGATCCTTAAAGATCGTCCATCTTGGTTTCGGGAGTGTCGAAGC CTAGAAGTTTTCACAATGTTTCCTGCAGGAAATGGAGGAACCATAGAGCTTGTCTACACTCAGACGTATGCTCCCACAAC ACTGGCTCCTGCCCGGGATTTTTGGACTCTTAGATACACTTCAAGTTTGGACAATGGCAGTCTTGTGGTTTGTGAGAGGT CTCTGTCTGGTTCTGGCTCGCGCCCAAATCCTGCTGCTGCGGCTCAGTTTGTAAGGGCTGAAATGCTCCCTAGTGGCTAC TTGATTCGACCGTGTGATGGTGGAGGGTCAATTATCCACATTGTTGACCACCTAAATCTTGAGGCATGGAGTGTGCCAGA AGTGTTGCGACCACTTTATGAATCATCGAAGGTCGTAGCTCAGAAAATGACAATTGCGGCGCTCCGATATATCAGGCAAA TAGCTCAAGAAACAAGCGGTGAAGTGGTATATGGATTGGGTAGGCAGCCTGCTGTTCTGCGAACCTTCAGCCAAAGATTA AGCAGAGGGTTCAATGATGCTGTAAATGGATTCAATGACGATGGTTGGACTGTACTGAACTGTGAGGGTGCTGAGGATGT AATCATTGCCGTTAATTCGACAAAAAATTTGAGCAGCACTTCTAATCCAGCAAATTCCCTCACATTCCTCGGAGGAATTC TCTGTGCCAAAGCTTCTATGTTGATCCAAAATGTCCCACCTGCCGTTTTGGTTCGCTTTTTGAGGGAGCACCGGTCGGAA TGGGCTGATTTCAATGTTGATGCTTATTCAGCTGCATCACTGAAAGCTGGCACCTATGCCTATCCTGGGATGAGGCCTAC AAGGTTCACTGGAAGTCAAATAATCATGCCTCTCGGCCATACAATTGAACATGAAGAGATGCTAGAAGTCATTAGACTTG AAGGCCACTCTATAGCTCAAGAAGACGCATTTGTTTCAAGAGACATTCATCTCTTACAGATATGTAGTGGAATTGATGAG AATGCAGTGGGGGCTTACTCCGAGCTCATATTTGCTCCAATCGATGAAATGTTCCCAGATGATGCTCCATTAGTTCCCTC TGGTTTCCGCATCATCCCATTGGATTCAAAACCAGTTGAGTTTTGCTCTTCTGTGGTGATAAAAAGGACGCAATGA
Protein sequence (LotjaGi2g1v0359200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMAVAQHRGESSSSGSIDKHLDGGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRC REKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTTPGANTDASCDSVVTTPQHTMRDANNPA GLLSIAEETLTEFLSKATGTAVDWVQLPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRECRS LEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTSSLDNGSLVVCERSLSGSGSRPNPAAAAQFVRAEMLPSGY LIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRL SRGFNDAVNGFNDDGWTVLNCEGAEDVIIAVNSTKNLSSTSNPANSLTFLGGILCAKASMLIQNVPPAVLVRFLREHRSE WADFNVDAYSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSIAQEDAFVSRDIHLLQICSGIDE NAVGAYSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPVEFCSSVVIKRTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 17 | 598 | 582 | 0.0 | – | |
| PANTHER | 17 | 598 | 582 | 0.0 | – | |
| SMART | 23 | 89 | 67 | 2.8E-15 | ||
| Gene3D | 24 | 95 | 72 | 5.6E-19 | – | |
| SUPERFAMILY | 25 | 88 | 64 | 1.28E-16 | ||
| CDD | 26 | 86 | 61 | 7.23972E-17 | ||
| Pfam | 27 | 84 | 58 | 3.2E-16 | ||
| ProSiteProfiles | 29 | 85 | 57 | 15.127 | ||
| CDD | 78 | 117 | 40 | 7.24798E-7 | – | |
| Coils | 91 | 122 | 32 | - | – | |
| ProSiteProfiles | 155 | 383 | 229 | 27.103 | ||
| CDD | 159 | 375 | 217 | 1.71597E-72 | – | |
| SMART | 164 | 374 | 211 | 1.3E-40 | ||
| SUPERFAMILY | 164 | 376 | 213 | 3.98E-34 | – | |
| Pfam | 165 | 372 | 208 | 7.3E-48 | ||
| Gene3D | 197 | 379 | 183 | 3.9E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi2g1v0359200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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