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LotjaGi2g1v0360800.1

Overview

Field Value
Gene ID LotjaGi2g1v0360800
Transcript ID LotjaGi2g1v0360800.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G60550.1 geminivirus rep interacting kinase 2; Swiss-Prot: sp|Q5HZ38|GRIK2_ARATH Serine/threonine-protein kinase GRIK2; TrEMBL-Plants: tr|V7AF83|V7AF83_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0360800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:85831473..85837400) extracted from Lotus japonicus Gifu genome v1.2.

GATCCATGCAATTTCTCTTAAATTACTCCATAAAACGTATGTTTAAAATCGTTTTATATTCTTTACCATTCCGAATCTTT TTAGAGATGGAAATACTATTATTTACTTGTTAAAAAAATTAAGTAGATGTTGGCACTCAAACGTGTAAAGAATAAAGATA ACCAACATCTAACGAGGTTCCAAAATATTCCTATTTTTATTCGAAGATAACAATATTCCAATTTAAAAAAAAAAACAAAA AAAAAATTATATTCATTCCTCCATCAACTAGGGTTTATTGATTCGGGTCTCATTTCGATTTCCCGCAATTGGATCGATCC AACCCTCGATTCCTGCTTCAATTCTAGGGTTTCCTGAATCTGGGGTTGTCTTCTACCCCTGTTTGTCATTCACGCCCAAT TAAAAAAGGTAACTTTGCCAGCGTCACAATTTCTCTGTCATTTTCATTTGTTCTTGACGGTTTCTCAAGTTTCTGGGTAC AGTTGTCATCTTTTTTCCCCCAATTGTTCACCCATTTGGTTTTTTATTAACGGGTATCTCTGCTTTTTCCTTTTTTCCTG GTTTTGTTTTTTGTTCTTTTCCTCTGTCTGTGCCCTTTTCATGGAAAAGGTCAATGAATTAAGCTGGAGTTGTCACAATG TTGGGTGTCAATCGCAGTAGTTCCTTGAACATCTCGTGCCGTATTCTCCACCTAGCTGAATGGCACCCCTTAGAATAGCA CTCTTCAGTTGGGCTTAAAGCTTGAAGCTTGAAGGTTGAAGGTTGAAGCCCTCTTTACTTTCAAATCAAGTAAGAATTTC ATTGTTATTCAATTTGATAATTTGATATTCAATTGTTGTTGGCTTAATAATAAAATGATTGTTTTGCAGATTTTCAATTT TTGGGGTCGAAGCCGAGCGGATGTTTGAGAAGACGATTTCTTTTGCCAAAGCAATGGGGTGCTGTAATTGCTTTGGGTTT ATCAGGAGACGGAGCCGTCGAAGGGCTAAGCCTGCTGTCAACAATAATGATCATGATCTTTCTCAGGAGCTTTTGTTGGA TGATGACACTGACGACGACGAAGAGCGTTTCTATGCTAACGCCCTTAGTGGAGATGGTAGTGAGGTGCAAAATCGTCCCA AACGGTCGGAGGATATTTTGAACACGAGGGTAGAGAATGGCTTGATTTGTAGGCAGTTTCCTGTTAAGGAGACTGACGTA GTTTTTCGCTCTGAGGTAATAATTGCTTTGTGAGAGTAGCTTTGTAGTTTTTTTTTTGTGTTAGGGTGAATTTGATGTAT AGTGAAATATCGAGACTATGTTGGCTGGTGGTATTTGATATGTGTAAAATGATCTTGAGTATATATTACTGGTGAAAATT GGACTCTTATTGTGTTCTTAAGCATGTTATGGATTTTAGACCCAGTCTCTCTTTATAATTGATTATTATTTTGAGCTGCA GTATGAATTCCTGAAATTTATTTAATCTAAACAGGAAGGAACTTTAATTAATTTTTAGTGAAACCCTAGTATGCTACTTG TCAAACGAAGCTTGGGTTTAATAATTTTTATACCATAATCCTATTTATACCATTTTTAGTCATAGACATGAAGTTGTGAC TGAGCATTCAAAAAAAGTTCAGCCATGGCTGTCTTCTCATTTAATGTGTTGTCTGCTTCTTCCCTCGTATCCACCCGTTG TCATAGTATATATAAAGGATATTATTCTTGTCTTGAATTGCTTTGTTTGTTAGTGACTGTGTAATTGAATTTATGTTTTT TTTCCATTAATGATGTTAAATTTCATGTGTCTGTTCCTATCTGAATGTTTATTTGTATACTAGGAAAACTTCTGTGATAT TGAATATATTTTCTGTCAGAAGCTTTATTGTACTTTTATTACTCCCGTTCAGGATGAAGATGGAAACAAGATGATAAATG AGTATATTCGTGAGTATAAGATTGGTTCTGGTAGCTACGGGAAAGTGGTAAGCTTAGTATTCATACTGCTATCCTGTTTC TGTATGAAAACAGTTTCCCTGAGCTTCTTTTCTTACGTGCATGGCAGGCTCTTTATCGAAGTTCTCTTGATGGAAAGCAT TATGCAATTAAGGTAGGCAACTTTTTTGGTGTGGTTACCCAGTTTACTATATGATAGGAAATATGGCCATATAGGCATAT TTTTTATTACAGGGTTGTAATGAGTAGTTTGTGTTCTTATAGTTGTCATTTATCAAGATAATAATGCAATTGTTCATTTA TTGAGCTGAAAATCTTTTGAATCGCAGTCCTTTAATAAGTCTCATTTACGGAAGCTTCGAGTTGCACCCTCGGAAACTGC CATGACTGATGTTCTACGTGAGGTATGTTTCTTCTGTATATCCTTGACTATTTATCATAATTTATATTCTGTACTGGTGT AAATATGATATATATGTGAATATGTCAAATTTTGTAACTTACATTGTTTATTCCCTTATGCATGCCACATTATGTTTACT TTTGCAGTGAATGTTTTTAGTTATATTCTGCTTGCATAATAGCATCCATTCGTGTAACTTTTGAAAATGTGGCCACATTC TTTCTTTGTCAAATTTGTGACTCCCATTTTTTTCATAAGGGAATTCTTTTGCCAACGTTTTAGTTTTACATTTTATTTTG CATCCAAGTTTTTTAGTTTATGATATTATATTTTCTTGCTTCAGTGTTTTAGCTATTCTGCTACTTTCCCTGTAATTAGT AAAAAGACACAAGTACTTTCTTTTCAGGTTTTCATCATGAAAATGCTGCAACATCCTAATATAGTCAATCTCATTGAGGT GATTGATGACCCAGAATCAGATAACTTCTACATGGGTACTGATGACTAGTTTCTTCTTCGTAGTTTCCTTATTTAGTAGT AATTGACTGCTACTCCTGAAAATTATGCTTCTTTATTTGATCAGCATTTTTTAGTGAATGAAAATCTCTTTTTGGCCCTA TGCTTGACTCTAAGTTTTCTTTTACAGTGCTTGAATATGTGGAAGGAAAATGGGTTTGTGAGGGTTCGGGTCCCACTTGT GGCTTAGGTGAAGAGACTGCTAGGAGATACCTGCGTGACATAGTTTCTGGATTAAGATATCTCCATGCACATGTAATGTT TCTTGATCATCTTTTTGTGGTTAATGTTGACTAGCTCTCTCTCACACACACACACACACACACACACATTTTCTGTATAT TGATGGAAATATATGATATTAGATTTCCATGCTAAACAAAAGGGGAAAACTTGTAAAGAAATATATCATATGTTAGTTGA TCATACTCTTATTCATGAATATGCTTTAAACACACATTTTTTGTATATCAATGGAAATATATGATATTAGATTATCACGC TATGCAAAAAGGGGGGAAACTTGTAAATAAATATAACATTTATGTTAGTTGGTCATACTCTCATTCATGAATATGCTTTG CAAATAATTTGATCATGTTTACCAGTGATTATTTATTATTTATTTGAAATGCAGAATATAGTACATGGAGATATTAAACC TGATAATCTATTGATTACTCGTCATGGTACAGTGAAGATAGGAGATTTCAGTGTCAGCCAGGCTTTTGAGGTAATGTAAT TACTGAGCCATATTTTAAATTTGATTACTTGAAATGAATGATATCAAAGCTGGTGAGTGTACTTGGTTATTGTTGTATCT TCAACTGCAACATGGGACACGCCTTTTTCCCTGTGAAATATATGAAACTATGAAACCTAGTAAGTGTACACTCTGTCAAT GCTTTACTTCAAATAAAAGTCAATGACTTTATTTAAAGAATCCCCTTCTCTTGTCAATTTTTGCTTCATTGAAATATATC ATAACCCTTATTTAGTGACTGTTGATTTATATTTGGATCGCGGTCAAATGATCCAGAGCCAATGTGAGGCTCTGTTTTCT ATGGTCACCCTAATGACCGAAACCTTGATTTTTATAAACAGACCTTCCCATCCCCTTAGGATTTCCATTTTTATCTTTGC AAATTCAAGACAATGACCATAAGTCGGTAACTTTTACCCCTAATTTTCCTTCAAAGAAAATTTCACCCTTAATTTACACC TATGATTCATATAGCCAAACCCACCTTCTGGAAAAAGGCTTTGATTGTTGTTGCATGTCACATTTTGGCCTACTTAGTGT TTTTTACAAGCTCACACACCTTGACTTACTCCATGCAATATCTCATAGAGATGTTGGTATTGGGATGTTCCAGGAACTAA TATGGAGGCTGCAATTGGTTTCATTTTGCAGGATAATAATGATGTTCTTCGACGATCACCTGGCACTCCTGTTTTCACTG CACCCGAATGTATTTTAGGTTGCTATTTTCTTTTCAAGTGTGTAAAATACTTTTGCCATTGGAGTTTATGACATGCAGGT TCTCACAACTGTCTATTATGTTTCTAGATATCACCTATCATGGTAAAGCTGCAGATACATGGGCAGTAGGAGTTACTTTA TACTGTATGATAGTGGGTGAATACCCTTTTCTTGGTGACACACTTCAAGATACATATGACAAAGTAAGAAATACACACAT ATGTATAACAGTATAAGAGGGTGTTTGGTCTGTTTTCTATTTTTTATTTTCAGTAAATATGCTTTTGTTATGATTTCAAA TTACATATATGCTATTTTGTTTTTAATCTATTTTCAAAACTTGTTTTCACCATTTTCTTTACTAAATTTCTTCAATAGGA AATTGAGTAATTTTTGTAAATGAAAACAAGAAAACAAACACTCAACTTTTTTTACCTGATATTATGCCTAACATTAGTGT TACTTGTTTTCACCTGATATTAACAAACTACTTTCTTCCTGATTCAGATAGTCAATAATCCTATAGAACTCCCAAATGAT ATGAATCCGCAGTTGAAGAAATTAATAGAAGGACTACTTTTCAAAGGTACACTGACTGCTATTCGATGTTTTGTCACGTC ACTTGAGTGTACTTTCCCTGTTAACTCTCCATTGAATTTTGAAATCTGCAGATCCAACACTAAGGATGACATTGAGCGAT GTCGCTGTAGATAGCTGGGTTATTGGAGATGATGGACCAATTCCTGAGTACCTTTGCTGGTGCAAGAGGAAGAACATGGA GGGGGAATACAATGTTGAGAGCAAAATACTTGCTTGACCCATGCTGACTAATTTTGTTTTTAGGTCACATTTGTTTATGT ACAGTCCTCAAAACTCTCTCTTCGAGTCTTCAGTGGTATGAAATGATTGATAGATCATTATAGAGGTAGCCTTAAAGGAA TTTTCAAAAAACATGGCTTGTGCAGTATGGTAAGTAGCAAAGGCAGAAAAATATGATATTTTTATTTGAAAGAATTTGGT GTCTAGAAACAGAGAGGTTCTTGTATGCCGGCTCTTTATCTGCATAGAGTGAGTTTTGAGCTCCATCTTCTAGGCATAGA TGTTAATTTCAAACTTCAGTGTGTATTTTACAGTCGGGCGTTTCATTATATCACAAAGCTCTCTTCGTTCTTTTTCCTAG CATTATTTTGGTTTCATGGAAGAAGAAAGGAAAGAAAAAGGCAAGAAAAAGTAAGTTGCTTTCTTGAGTAGTGAACTTTT CATTTTAATCCTAATTCATTCTTTCTCCTCCCCCACGAGTGTCTCTCCCTCCTTCAACCCATGTTGTGACAACGCCTCCG GACACCCCACACAACCACCTTCTCTCCTCACCTCCTTTTTGGTGACTTGTACAATCTTCCTGCCCCCTAATGAAAGGTTT TGAATTGCATTGGAATGAAGGGTAGTCATATCACAATCGACAAAGTGGAAATTGTAGGTCGTCGTATGATTACAAAAGGC TGAGGTGAGTGGAGGAAATGTTGAAGACATTGTGATGGAGGGCTTCAAGGCCGTAAACAAGGGGATTGAAACGATGGAGT GTGGGCTG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0360800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTGAGAAGACGATTTCTTTTGCCAAAGCAATGGGGTGCTGTAATTGCTTTGGGTTTATCAGGAGACGGAGCCGTCG AAGGGCTAAGCCTGCTGTCAACAATAATGATCATGATCTTTCTCAGGAGCTTTTGTTGGATGATGACACTGACGACGACG AAGAGCGTTTCTATGCTAACGCCCTTAGTGGAGATGGTAGTGAGGTGCAAAATCGTCCCAAACGGTCGGAGGATATTTTG AACACGAGGGTAGAGAATGGCTTGATTTGTAGGCAGTTTCCTGTTAAGGAGACTGACGTAGTTTTTCGCTCTGAGGATGA AGATGGAAACAAGATGATAAATGAGTATATTCGTGAGTATAAGATTGGTTCTGGTAGCTACGGGAAAGTGGCTCTTTATC GAAGTTCTCTTGATGGAAAGCATTATGCAATTAAGTCCTTTAATAAGTCTCATTTACGGAAGCTTCGAGTTGCACCCTCG GAAACTGCCATGACTGATGTTCTACGTGAGGTTTTCATCATGAAAATGCTGCAACATCCTAATATAGTCAATCTCATTGA GGTGATTGATGACCCAGAATCAGATAACTTCTACATGGTGCTTGAATATGTGGAAGGAAAATGGGTTTGTGAGGGTTCGG GTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACCTGCGTGACATAGTTTCTGGATTAAGATATCTCCATGCA CATAATATAGTACATGGAGATATTAAACCTGATAATCTATTGATTACTCGTCATGGTACAGTGAAGATAGGAGATTTCAG TGTCAGCCAGGCTTTTGAGGATAATAATGATGTTCTTCGACGATCACCTGGCACTCCTGTTTTCACTGCACCCGAATGTA TTTTAGATATCACCTATCATGGTAAAGCTGCAGATACATGGGCAGTAGGAGTTACTTTATACTGTATGATAGTGGGTGAA TACCCTTTTCTTGGTGACACACTTCAAGATACATATGACAAAATAGTCAATAATCCTATAGAACTCCCAAATGATATGAA TCCGCAGTTGAAGAAATTAATAGAAGGACTACTTTTCAAAGATCCAACACTAAGGATGACATTGAGCGATGTCGCTGTAG ATAGCTGGGTTATTGGAGATGATGGACCAATTCCTGAGTACCTTTGCTGGTGCAAGAGGAAGAACATGGAGGGGGAATAC AATGTTGAGAGCAAAATACTTGCTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0360800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFEKTISFAKAMGCCNCFGFIRRRSRRRAKPAVNNNDHDLSQELLLDDDTDDDEERFYANALSGDGSEVQNRPKRSEDIL NTRVENGLICRQFPVKETDVVFRSEDEDGNKMINEYIREYKIGSGSYGKVALYRSSLDGKHYAIKSFNKSHLRKLRVAPS ETAMTDVLREVFIMKMLQHPNIVNLIEVIDDPESDNFYMVLEYVEGKWVCEGSGPTCGLGEETARRYLRDIVSGLRYLHA HNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDNNDVLRRSPGTPVFTAPECILDITYHGKAADTWAVGVTLYCMIVGE YPFLGDTLQDTYDKIVNNPIELPNDMNPQLKKLIEGLLFKDPTLRMTLSDVAVDSWVIGDDGPIPEYLCWCKRKNMEGEY NVESKILA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24346
51 392 342 1.4E-152 –
PANTHER
PTHR24346:SF54
51 392 342 1.4E-152 –
Gene3D
G3DSA:3.30.200.20
110 213 104 2.6E-28 –
SUPERFAMILY
SSF56112
112 387 276 1.62E-74
IPR011009
SMART
SM00220
116 377 262 4.8E-73
IPR000719
ProSiteProfiles
PS50011
116 377 262 42.35
IPR000719
Pfam
PF00069
118 376 259 5.2E-58
IPR000719
CDD
cd14008
122 377 256 2.0768E-126 –
ProSitePatterns
PS00107
122 145 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
215 383 169 1.9E-49 –
ProSitePatterns
PS00108
243 255 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0360800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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