Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi2g1v0360800.2

Overview

Field Value
Gene ID LotjaGi2g1v0360800
Transcript ID LotjaGi2g1v0360800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G60550.1 geminivirus rep interacting kinase 2; Swiss-Prot: sp|Q5HZ38|GRIK2_ARATH Serine/threonine-protein kinase GRIK2; TrEMBL-Plants: tr|V7AF83|V7AF83_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0360800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:85831935..85837117) extracted from Lotus japonicus Gifu genome v1.2.

CGGGTCTCATTTCGATTTCCCGCAATTGGATCGATCCAACCCTCGATTCCTGCTTCAATTCTAGGGTTTCCTGAATCTGG GGTTGTCTTCTACCCCTGTTTGTCATTCACGCCCAATTAAAAAAGGTAACTTTGCCAGCGTCACAATTTCTCTGTCATTT TCATTTGTTCTTGACGGTTTCTCAAGTTTCTGGGTACAGTTGTCATCTTTTTTCCCCCAATTGTTCACCCATTTGGTTTT TTATTAACGGGTATCTCTGCTTTTTCCTTTTTTCCTGGTTTTGTTTTTTGTTCTTTTCCTCTGTCTGTGCCCTTTTCATG GAAAAGGTCAATGAATTAAGCTGGAGTTGTCACAATGTTGGGTGTCAATCGCAGTAGTTCCTTGAACATCTCGTGCCGTA TTCTCCACCTAGCTGAATGGCACCCCTTAGAATAGCACTCTTCAGTTGGGCTTAAAGCTTGAAGCTTGAAGGTTGAAGGT TGAAGCCCTCTTTACTTTCAAATCAAGTAAGAATTTCATTGTTATTCAATTTGATAATTTGATATTCAATTGTTGTTGGC TTAATAATAAAATGATTGTTTTGCAGATTTTCAATTTTTGGGGTCGAAGCCGAGCGGATGTTTGAGAAGACGATTTCTTT TGCCAAAGCAATGGGGTGCTGTAATTGCTTTGGGTTTATCAGGAGACGGAGCCGTCGAAGGGCTAAGCCTGCTGTCAACA ATAATGATCATGATCTTTCTCAGGAGCTTTTGTTGGATGATGACACTGACGACGACGAAGAGCGTTTCTATGCTAACGCC CTTAGTGGAGATGGTAGTGAGGTGCAAAATCGTCCCAAACGGTCGGAGGATATTTTGAACACGAGGGTAGAGAATGGCTT GATTTGTAGGCAGTTTCCTGTTAAGGAGACTGACGTAGTTTTTCGCTCTGAGGTAATAATTGCTTTGTGAGAGTAGCTTT GTAGTTTTTTTTTTGTGTTAGGGTGAATTTGATGTATAGTGAAATATCGAGACTATGTTGGCTGGTGGTATTTGATATGT GTAAAATGATCTTGAGTATATATTACTGGTGAAAATTGGACTCTTATTGTGTTCTTAAGCATGTTATGGATTTTAGACCC AGTCTCTCTTTATAATTGATTATTATTTTGAGCTGCAGTATGAATTCCTGAAATTTATTTAATCTAAACAGGAAGGAACT TTAATTAATTTTTAGTGAAACCCTAGTATGCTACTTGTCAAACGAAGCTTGGGTTTAATAATTTTTATACCATAATCCTA TTTATACCATTTTTAGTCATAGACATGAAGTTGTGACTGAGCATTCAAAAAAAGTTCAGCCATGGCTGTCTTCTCATTTA ATGTGTTGTCTGCTTCTTCCCTCGTATCCACCCGTTGTCATAGTATATATAAAGGATATTATTCTTGTCTTGAATTGCTT TGTTTGTTAGTGACTGTGTAATTGAATTTATGTTTTTTTTCCATTAATGATGTTAAATTTCATGTGTCTGTTCCTATCTG AATGTTTATTTGTATACTAGGAAAACTTCTGTGATATTGAATATATTTTCTGTCAGAAGCTTTATTGTACTTTTATTACT CCCGTTCAGGATGAAGATGGAAACAAGATGATAAATGAGTATATTCGTGAGTATAAGATTGGTTCTGGTAGCTACGGGAA AGTGGTAAGCTTAGTATTCATACTGCTATCCTGTTTCTGTATGAAAACAGTTTCCCTGAGCTTCTTTTCTTACGTGCATG GCAGGCTCTTTATCGAAGTTCTCTTGATGGAAAGCATTATGCAATTAAGGTAGGCAACTTTTTTGGTGTGGTTACCCAGT TTACTATATGATAGGAAATATGGCCATATAGGCATATTTTTTATTACAGGGTTGTAATGAGTAGTTTGTGTTCTTATAGT TGTCATTTATCAAGATAATAATGCAATTGTTCATTTATTGAGCTGAAAATCTTTTGAATCGCAGTCCTTTAATAAGTCTC ATTTACGGAAGCTTCGAGTTGCACCCTCGGAAACTGCCATGACTGATGTTCTACGTGAGGTATGTTTCTTCTGTATATCC TTGACTATTTATCATAATTTATATTCTGTACTGGTGTAAATATGATATATATGTGAATATGTCAAATTTTGTAACTTACA TTGTTTATTCCCTTATGCATGCCACATTATGTTTACTTTTGCAGTGAATGTTTTTAGTTATATTCTGCTTGCATAATAGC ATCCATTCGTGTAACTTTTGAAAATGTGGCCACATTCTTTCTTTGTCAAATTTGTGACTCCCATTTTTTTCATAAGGGAA TTCTTTTGCCAACGTTTTAGTTTTACATTTTATTTTGCATCCAAGTTTTTTAGTTTATGATATTATATTTTCTTGCTTCA GTGTTTTAGCTATTCTGCTACTTTCCCTGTAATTAGTAAAAAGACACAAGTACTTTCTTTTCAGGTTTTCATCATGAAAA TGCTGCAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATAACTTCTACATGGGTACTGAT GACTAGTTTCTTCTTCGTAGTTTCCTTATTTAGTAGTAATTGACTGCTACTCCTGAAAATTATGCTTCTTTATTTGATCA GCATTTTTTAGTGAATGAAAATCTCTTTTTGGCCCTATGCTTGACTCTAAGTTTTCTTTTACAGTGCTTGAATATGTGGA AGGAAAATGGGTTTGTGAGGGTTCGGGTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACCTGCGTGACATAG TTTCTGGATTAAGATATCTCCATGCACATGTAATGTTTCTTGATCATCTTTTTGTGGTTAATGTTGACTAGCTCTCTCTC ACACACACACACACACACACACACATTTTCTGTATATTGATGGAAATATATGATATTAGATTTCCATGCTAAACAAAAGG GGAAAACTTGTAAAGAAATATATCATATGTTAGTTGATCATACTCTTATTCATGAATATGCTTTAAACACACATTTTTTG TATATCAATGGAAATATATGATATTAGATTATCACGCTATGCAAAAAGGGGGGAAACTTGTAAATAAATATAACATTTAT GTTAGTTGGTCATACTCTCATTCATGAATATGCTTTGCAAATAATTTGATCATGTTTACCAGTGATTATTTATTATTTAT TTGAAATGCAGAATATAGTACATGGAGATATTAAACCTGATAATCTATTGATTACTCGTCATGGTACAGTGAAGATAGGA GATTTCAGTGTCAGCCAGGCTTTTGAGGTAATGTAATTACTGAGCCATATTTTAAATTTGATTACTTGAAATGAATGATA TCAAAGCTGGTGAGTGTACTTGGTTATTGTTGTATCTTCAACTGCAACATGGGACACGCCTTTTTCCCTGTGAAATATAT GAAACTATGAAACCTAGTAAGTGTACACTCTGTCAATGCTTTACTTCAAATAAAAGTCAATGACTTTATTTAAAGAATCC CCTTCTCTTGTCAATTTTTGCTTCATTGAAATATATCATAACCCTTATTTAGTGACTGTTGATTTATATTTGGATCGCGG TCAAATGATCCAGAGCCAATGTGAGGCTCTGTTTTCTATGGTCACCCTAATGACCGAAACCTTGATTTTTATAAACAGAC CTTCCCATCCCCTTAGGATTTCCATTTTTATCTTTGCAAATTCAAGACAATGACCATAAGTCGGTAACTTTTACCCCTAA TTTTCCTTCAAAGAAAATTTCACCCTTAATTTACACCTATGATTCATATAGCCAAACCCACCTTCTGGAAAAAGGCTTTG ATTGTTGTTGCATGTCACATTTTGGCCTACTTAGTGTTTTTTACAAGCTCACACACCTTGACTTACTCCATGCAATATCT CATAGAGATGTTGGTATTGGGATGTTCCAGGAACTAATATGGAGGCTGCAATTGGTTTCATTTTGCAGGATAATAATGAT GTTCTTCGACGATCACCTGGCACTCCTGTTTTCACTGCACCCGAATGTATTTTAGGTTGCTATTTTCTTTTCAAGTGTGT AAAATACTTTTGCCATTGGAGTTTATGACATGCAGGTTCTCACAACTGTCTATTATGTTTCTAGATATCACCTATCATGG TAAAGCTGCAGATACATGGGCAGTAGGAGTTACTTTATACTGTATGATAGTGGGTGAATACCCTTTTCTTGGTGACACAC TTCAAGATACATATGACAAAGTAAGAAATACACACATATGTATAACAGTATAAGAGGGTGTTTGGTCTGTTTTCTATTTT TTATTTTCAGTAAATATGCTTTTGTTATGATTTCAAATTACATATATGCTATTTTGTTTTTAATCTATTTTCAAAACTTG TTTTCACCATTTTCTTTACTAAATTTCTTCAATAGGAAATTGAGTAATTTTTGTAAATGAAAACAAGAAAACAAACACTC AACTTTTTTTACCTGATATTATGCCTAACATTAGTGTTACTTGTTTTCACCTGATATTAACAAACTACTTTCTTCCTGAT TCAGATAGTCAATAATCCTATAGAACTCCCAAATGATATGAATCCGCAGTTGAAGAAATTAATAGAAGGACTACTTTTCA AAGGTACACTGACTGCTATTCGATGTTTTGTCACGTCACTTGAGTGTACTTTCCCTGTTAACTCTCCATTGAATTTTGAA ATCTGCAGATCCAACACTAAGGATGACATTGAGCGATGTCGCTGTAGATAGCTGGGTTATTGGAGATGATGGACCAATTC CTGAGTACCTTTGCTGGTGCAAGAGGAAGAACATGGAGGGGGAATACAATGTTGAGAGCAAAATACTTGCTTGACCCATG CTGACTAATTTTGTTTTTAGGTCACATTTGTTTATGTACAGTCCTCAAAACTCTCTCTTCGAGTCTTCAGTGGTATGAAA TGATTGATAGATCATTATAGAGGTAGCCTTAAAGGAATTTTCAAAAAACATGGCTTGTGCAGTATGGTAAGTAGCAAAGG CAGAAAAATATGATATTTTTATTTGAAAGAATTTGGTGTCTAGAAACAGAGAGGTTCTTGTATGCCGGCTCTTTATCTGC ATAGAGTGAGTTTTGAGCTCCATCTTCTAGGCATAGATGTTAATTTCAAACTTCAGTGTGTAT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0360800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTGAGAAGACGATTTCTTTTGCCAAAGCAATGGGGTGCTGTAATTGCTTTGGGTTTATCAGGAGACGGAGCCGTCG AAGGGCTAAGCCTGCTGTCAACAATAATGATCATGATCTTTCTCAGGAGCTTTTGTTGGATGATGACACTGACGACGACG AAGAGCGTTTCTATGCTAACGCCCTTAGTGGAGATGGTAGTGAGGTGCAAAATCGTCCCAAACGGTCGGAGGATATTTTG AACACGAGGGTAGAGAATGGCTTGATTTGTAGGCAGTTTCCTGTTAAGGAGACTGACGTAGTTTTTCGCTCTGAGGATGA AGATGGAAACAAGATGATAAATGAGTATATTCGTGAGTATAAGATTGGTTCTGGTAGCTACGGGAAAGTGGCTCTTTATC GAAGTTCTCTTGATGGAAAGCATTATGCAATTAAGTCCTTTAATAAGTCTCATTTACGGAAGCTTCGAGTTGCACCCTCG GAAACTGCCATGACTGATGTTCTACGTGAGGTTTTCATCATGAAAATGCTGCAACATCCTAATATAGTCAATCTCATTGA GGTGATTGATGACCCAGAATCAGATAACTTCTACATGGTGCTTGAATATGTGGAAGGAAAATGGGTTTGTGAGGGTTCGG GTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACCTGCGTGACATAGTTTCTGGATTAAGATATCTCCATGCA CATAATATAGTACATGGAGATATTAAACCTGATAATCTATTGATTACTCGTCATGGTACAGTGAAGATAGGAGATTTCAG TGTCAGCCAGGCTTTTGAGGATAATAATGATGTTCTTCGACGATCACCTGGCACTCCTGTTTTCACTGCACCCGAATGTA TTTTAGATATCACCTATCATGGTAAAGCTGCAGATACATGGGCAGTAGGAGTTACTTTATACTGTATGATAGTGGGTGAA TACCCTTTTCTTGGTGACACACTTCAAGATACATATGACAAAATAGTCAATAATCCTATAGAACTCCCAAATGATATGAA TCCGCAGTTGAAGAAATTAATAGAAGGACTACTTTTCAAAGATCCAACACTAAGGATGACATTGAGCGATGTCGCTGTAG ATAGCTGGGTTATTGGAGATGATGGACCAATTCCTGAGTACCTTTGCTGGTGCAAGAGGAAGAACATGGAGGGGGAATAC AATGTTGAGAGCAAAATACTTGCTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0360800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFEKTISFAKAMGCCNCFGFIRRRSRRRAKPAVNNNDHDLSQELLLDDDTDDDEERFYANALSGDGSEVQNRPKRSEDIL NTRVENGLICRQFPVKETDVVFRSEDEDGNKMINEYIREYKIGSGSYGKVALYRSSLDGKHYAIKSFNKSHLRKLRVAPS ETAMTDVLREVFIMKMLQHPNIVNLIEVIDDPESDNFYMVLEYVEGKWVCEGSGPTCGLGEETARRYLRDIVSGLRYLHA HNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDNNDVLRRSPGTPVFTAPECILDITYHGKAADTWAVGVTLYCMIVGE YPFLGDTLQDTYDKIVNNPIELPNDMNPQLKKLIEGLLFKDPTLRMTLSDVAVDSWVIGDDGPIPEYLCWCKRKNMEGEY NVESKILA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24346
51 392 342 1.4E-152 –
PANTHER
PTHR24346:SF54
51 392 342 1.4E-152 –
Gene3D
G3DSA:3.30.200.20
110 213 104 2.6E-28 –
SUPERFAMILY
SSF56112
112 387 276 1.62E-74
IPR011009
SMART
SM00220
116 377 262 4.8E-73
IPR000719
ProSiteProfiles
PS50011
116 377 262 42.35
IPR000719
Pfam
PF00069
118 376 259 5.2E-58
IPR000719
CDD
cd14008
122 377 256 2.0768E-126 –
ProSitePatterns
PS00107
122 145 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
215 383 169 1.9E-49 –
ProSitePatterns
PS00108
243 255 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0360800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…