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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0362500 |
| Transcript ID | LotjaGi2g1v0362500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:85986227..85990365) extracted from Lotus japonicus Gifu genome v1.2.
CTAACAAACTTCTCCGATTCTATATCTGCTTTTTGCAGAGGAGTATGGAGGGCTAGGTCTAGGTTACTTGTATCATTGTA TAGCAATGGAAGAGATTAGCCGTGCTTCAGCATCTGTTGGCCTTTCTTATGGTGCTCATTCTAACCTGTGTCTCAATCAG CTGGTAATTGAAGGGAACTTAAATCTCTTCTGTTATATGCTTGATGATCTTCTGATAAGTCTTCAATATTTCTACCTTCT GTTTTGTTCAGGTGAGGAATGGAAGCCCTGATCAGAAACAGAAATACTTGCCAAAGGTTCTAGTTCTTCTTCGTTTGATC TTATTTATCTCTTTGCAATATTTTCTGCCTTTCTCTATTCTAATGCAAAGTTTGACTTTGTCAGGCAAAATGCTCATAAT CTTTGTTTCTTACCTATTTCGTGTGCTCATTCATAGTGTATTTCAATTCTCCCGTGTCCTGTTTATCTATCTATCTGCTA AGTTGATTTTTTTTTTGTTCAATTTTGAAGCTTATCTCCGGGGACCATGTCGGAGCTTTGGCAATGAGTGAGCCCAATTG TAAGATATGCGAAATTGAATGGTAGTGTATTTAATTTTTAGATATTCCAAGGATTTTGTGAAGTGAATTTGTCTTTTCTG CAGCTGGTTCTGATGTTGTCAGTATGAAATGCAAGGCTGATCGTGTTGATGGGGGCTATGTACTTAATGGGAACAAGATG TGGTGTACTAATGGGCCAGTTGCTCAAACATTAGTATGTTCCTTTAAATTTCGTTGCACTATCCCTTGCTCTTTTCATTG ACTGCATTCTCTTTTAATATGCCTAAAGAAAATCAAAAGGGTAATGTTTCCTGAATTTGTAATTTCAATGGACATTCTTT CAATGTAACAACATATCATCATCATCATCATCTTTGGACCTGATTGCAAAATGATGAATTAAGATATGTCGTAAGGCTAA ATTTATTACACCATGCATGTATAAAATGCAGGGTATAAATGCTAACCATATTTATCACATATTTCATTGCACACATTTCA CTCCTATTTAACATCCAGCAGAACTAATCTAAGAGGACCTGTCTTAGTTTGCTTGACTAATTTCTTTACCTATGGCTTAA ATGGGTAAATGGAATACCCATTTTGTATAAAACTAGATCTAGTAGTCTAGGCATATGCTGAGGGTGCATATTGAATATTT GATTGTTTTGTGAATTGAATCAGGTTATCTATGCAAAAACAGACATAACAGCTGGGTCAAAAGGAATCACTGCATTCATC ATTGAGAAGGGAATGCCTGGGTAATTGTACTGAACCTTGACCAGAAATTATATGATATTGAGTGGACAAAACTGTGTTTA GTGTGATTATATGCTATGGCCAATCTAACTACAGGCGGTTAATATTTGTGGGCATCACATGATTTGAAGCTATTGTTTCA CTTTGACCACAAGTGGTGTTGCTCAAACTACTGGATATCTTGGACAAAAAAAAAACTACTGGATATCAAACAGTACCTTA TACCAAATTTCTCCCACTTTTTGTTCAACTCTAGACTCTGTGTAGTGAGACTTACCATGTTCTGTTGCAAGAATGCAAAA TAGTTTTAGTTAAAAAAAGAAAAAGTACTGGAACCTTTTAGCAACGAAGAGTTCAAATTGATTCGTAAGCCTTTTAAAAA TATTTCTCTGAAAATGAATGAGGAAAAAGAGTCATGATTACTCAAAGAAAAGAGAAGAAAAATAAAATTCGCATGGCACT GTTGAGATGATGGTGCCTTATATCATAAATGAAAATCTAACATTTATTTCTGTTTGACTACAGATTCAGTACTGCCCAGA AATTGGATAAACTTGGGATGCGAGGAAGTGATACGTATGTATGCATATTCTATGAGAAATTTTCTACATCTAACCCATTG CCGACTACTCCCCCTTGCTTTTACTGATAATATGGAATTGTGTGTCCAGATGTGAGCTTGTCTTTGAGAATTGCTTTGTT CCAGAAGAAAATGTTCTTGGGAAAGAAGGGAAAGGTCTTGCTATTGCTTTTTCAGTCTTCTTTATTAATTTTAAAAAGAA ATCATCTCTATGTTATTGAATAGACTTGAGAAGAAAGAGCTTAAATTTAAGTTCTGTTTTTCAGCTTTTTATTTTTTGAT ACAGCCTTTAAGAAGTTTTTATATTAAAAACAACAAGTATTGAAAATCAATTACCCTTCCACTTATTTCAGAAGTTGAGG ACCATTAGCTTTAAATCCATATTTTTTCACCCCAAACTAAATATTATTTGGTTCCAAAGGGGCTCATAGTCCGGCCTGAA AAAGTTTGTTGCAAGACTATGATTATCCTTACGCAATATGCCCAACATTGATCCATGAATCTATCATATCAGCCTCTTGT GTGTGTGTGTGTTTGTCTTTCTAAGCATGTTTAATCATTCGATGAAATAAAAAAAAGAGCATAGTTTGTTCTAATCTTTG TTAGACAAAGAGAGCCATCTGTTTTTCTCTTTTTCTGTTTAAACTATTTTTATTATTCATCATATGTCAACTATCAACCA TAGTTTGGTAAAACCACCTCTTTCATTTTGTTCAGGAGTGTATGTAATGATGTCTGGACTGGATTTAGAAAGGCTTGTTT TGGCTGCTGGTCCCCTGGGTATTATGCAGGCATGTCTTGATGTTGCCCTTCCTTATGTTCGACAAAGAGAGCAGTTTGGT CGTCCTATTGGGGAGTTTCAGTTTATACAGGTTCATATATGGACAGCGTTAACTTATTTTCTGCAATTGTCTTGCATGTG TATAGTATGTGAATCTTACCCATCACACGTCTATTGATCTTTTGGTTACAGGGGAAAGTAGCTGACATGTATACTTCTTT ACAGTCCTCAAGGTAGAAGGTTCTAATGTCATCGTACTCTCTTTTCTCTCTAAATAAGTTTTCATGGCAGTACATAACAT CCTTCATTTCAGGTCTTATGTGTATGCTGTAGCTCGGGACTGTGACAATGGAAAAGTTGATCCAAAGGTGCTTCCACATA TCTTTATCTTGTGGTCAATATGGTATTAAGTGTATTTTTTGTAATTCTTCTACAATTAATTATGAAGCTAAAATCAATTC TGGGGAGAAGTTACTTTGAGTAGTTTATGGGTGGCAGAGTTGATTCTTAGAAAAGAGATGTTGATCTGAACATGTTTTAA CTTTTTTTTCCTCTTGAAAATGTATGCTTCTTATTTTGTTCTTTGAATGAATTATTTTCTATTCATGAAATTCTCTCCAT ATTTTTCATGCATTACAGGTATTGCATGAAATGATTAACCTTTCTTATTTTGTTTTTTCATGTTCCTGTTTTTACCCTAG TACTTTGCTTTAGGTTTTGCATGGTATAATATGTTCCTGTTTATTGTTCATGTTTTTGCTATTGTTTACCAAACTTCAGC TAAGATGATGTTGGTTCATTATAATTCTACCAGCACAAGTTCAGCCTAGTCTTTAATGCAACAAACTTCTATCTTTCTGT TTTTCACCATAGTTGTTTGCCTATTCATCTTAAAACATACTGACTCGGCTACTGATTTCAGGATTGTGCTGGAGCTATAC TTTGTGCAGCTGAAAGAGCAACCCAGGTTGCTTTGCAGGTAAATGAGTTGCTTCCATGGGTTATAGTTAGTTAGGCATAA CTTGAATTTTAAAATGGTATCAGAGTCTATCCTATATCAGCTTTTCGGGTCATCCATAAATGAGTCACCTGCAGATACCC AATTCTGCAAACTTCACGCTCCATATGTCCAGCATTAAGCATGAGGGGGGAATGTTAAAGTCCCTTATTAACTACATATA TTAACTAGAGATATAGCTAAAATAGTCCTTACATAGGGTAAAACAACCCACACACCGTGAGCTTTTGGGGTAGAGTTAGA CATAGCCCAAATTCTAAGAGTTGTTGTTCTGTTGTTTACATTTCTCTGTGCTTATCTCCTCCAATTTTGCAGGCCATACA ATGTTTAGGTGGGAATGGCTATGTGAATGAGTATCCAACTGGTCGTCTCCTGAGAGATGCTAAACTCTACGAGATTGGGG CAGGAACTAGTGAGATAAGAAGAATGATTATTGGACGTGAGCTCTTCAAGGAACAATGA
CDS sequence (LotjaGi2g1v0362500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGATTAGCCGTGCTTCAGCATCTGTTGGCCTTTCTTATGGTGCTCATTCTAACCTGTGTCTCAATCAGCTGGT GAGGAATGGAAGCCCTGATCAGAAACAGAAATACTTGCCAAAGCTTATCTCCGGGGACCATGTCGGAGCTTTGGCAATGA GTGAGCCCAATTCTGGTTCTGATGTTGTCAGTATGAAATGCAAGGCTGATCGTGTTGATGGGGGCTATGTACTTAATGGG AACAAGATGTGGTGTACTAATGGGCCAGTTGCTCAAACATTAGTTATCTATGCAAAAACAGACATAACAGCTGGGTCAAA AGGAATCACTGCATTCATCATTGAGAAGGGAATGCCTGGATTCAGTACTGCCCAGAAATTGGATAAACTTGGGATGCGAG GAAGTGATACATGTGAGCTTGTCTTTGAGAATTGCTTTGTTCCAGAAGAAAATGTTCTTGGGAAAGAAGGGAAAGGAGTG TATGTAATGATGTCTGGACTGGATTTAGAAAGGCTTGTTTTGGCTGCTGGTCCCCTGGGTATTATGCAGGCATGTCTTGA TGTTGCCCTTCCTTATGTTCGACAAAGAGAGCAGTTTGGTCGTCCTATTGGGGAGTTTCAGTTTATACAGGGGAAAGTAG CTGACATGTATACTTCTTTACAGTCCTCAAGGTCTTATGTGTATGCTGTAGCTCGGGACTGTGACAATGGAAAAGTTGAT CCAAAGGATTGTGCTGGAGCTATACTTTGTGCAGCTGAAAGAGCAACCCAGGTTGCTTTGCAGGCCATACAATGTTTAGG TGGGAATGGCTATGTGAATGAGTATCCAACTGGTCGTCTCCTGAGAGATGCTAAACTCTACGAGATTGGGGCAGGAACTA GTGAGATAAGAAGAATGATTATTGGACGTGAGCTCTTCAAGGAACAATGA
Protein sequence (LotjaGi2g1v0362500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEISRASASVGLSYGAHSNLCLNQLVRNGSPDQKQKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYVLNG NKMWCTNGPVAQTLVIYAKTDITAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGV YVMMSGLDLERLVLAAGPLGIMQACLDVALPYVRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYAVARDCDNGKVD PKDCAGAILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRELFKEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 48 | 48 | 1.5E-14 | ||
| PANTHER | 1 | 309 | 309 | 7.3E-200 | – | |
| PANTHER | 1 | 309 | 309 | 7.3E-200 | – | |
| CDD | 1 | 307 | 307 | 0.0 | ||
| Pfam | 1 | 46 | 46 | 4.7E-11 | ||
| SUPERFAMILY | 1 | 168 | 168 | 6.54E-63 | ||
| Gene3D | 49 | 162 | 114 | 2.5E-46 | – | |
| Pfam | 50 | 145 | 96 | 1.3E-24 | ||
| ProSitePatterns | 52 | 64 | 13 | - | ||
| SUPERFAMILY | 155 | 307 | 153 | 1.93E-50 | ||
| Pfam | 157 | 305 | 149 | 1.8E-45 | ||
| Gene3D | 163 | 309 | 147 | 1.3E-51 | – | |
| ProSitePatterns | 264 | 283 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acyl-CoA dehydrogenase activity | Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0362500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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