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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0367900 |
| Transcript ID | LotjaGi2g1v0367900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dirigent protein; TAIR: AT3G55230.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9M3C8|DIR24_ARATH Dirigent protein 24; TrEMBL-Plants: tr|A0A0L9TIT2|A0A0L9TIT2_PHAAN Dirigent protein; Found in the gene: LotjaGi2g1v0367900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86559966..86561383) extracted from Lotus japonicus Gifu genome v1.2.
AAACTGTAAAGCTTTCTAAACTATATATAACATTTCATTTGGAGATAGGTTCTTAAATTACAATTTCATCTTCACAAGAA GGCAAAATGGCTAAAAGTCTCCTTCTAACCTCATTTTCTCTAAAAGTTATAGTACTCCACTGTCTCCACCTCTCCCTCTT TGGAATTACTACTCAAGCTAAACCATTCACCTTCTTCATGCATGACATTATAGGTGGATCAACCCCTTCAGAAAGAATTG TGAGTGGCATCATAGTGAACTCTCAAACCAATAACTTTCCTTTCTCAAAACCCAATAACAGGATCTTCCCATTTAAAGGT AGCATACCATTTGTTGATACTACTACCATTGGTAGCAGTAGCACCATGGTGGTAAAAAACATTGACAAAAACAAGGTGGT TATTGATAAGAACTCACTTCCATATGTCACATTAGAGAAGCTTTTGTTTGGAAGAATAACAGTGATTGATGATGAAATCA CAAAAGGGCATGAGTTTGGTTCTGAGATTATTGGTAAAGCACAGGGGTTTCATTTGGCTAGCTCATTGGATGGAAGCAGC AAAACCATGGCATTTTCAGCTTTGTTTCTTAATGAAGATCATGAAGAGGAAGATGCTATTAGTTTCTTCGGGGTACACAG GACTGCTACAAATGAGTCCCACATTGCTGTGGTTGGAGGAACAGGAAAATATGAAAATGCAAGAGGGTATGCTAAAATTG AGACTGTAAATCTGTCTGATCAAAACCCAAATTATGGAGTGGAAACACTTCTTCAGATTACTGTCTACCTAAGCTAGCTA GATAGAACTTTTTGTCGCGCGTTAATGTTATATCAGATTAAGATGATGATGATGATGGCATTATTCTTTGTAGAAAAATA AGCATTACTAACTCTGTATCTGGATCACTGGATGAATATATAAATTTATATTTCTAGTTATGATTGTTCTGCACCTCTTA ATAGTGAATGAGGTTTCATTGTTGGGATGTATGCTGAGGTTTTCTAATGCCTTTGTGACTTCTATTGGAGCAGTGATATT ATATGCAAATAATGCTTTATATGGTAATGGTAAGGATACGTATATGAACAAACATTCCTGCGTTGTTTAAATATATCATT GATTTGTTTCCTCCAGCATGCTCAGAGAGACCAAGCAAATGAAAAGAAAAGTATTTGCAACAGTGAAATGGAACAATGTG TTACAAGTCTTGCCAATGGTAGCAAAAACATCATTCATTGCATTTGCACTACAACTTGCAGGTTAATTAACTCCATATTC GGAATTCTGAGATTGTTCTGTTTGCAGGGCCTCTTGATCAATTGTGAAGTTAAGGTCTTTAGGAGTCTGTAACTGTTATG AAGAGCATGTGAGCTTGTGTATATTTTGACCAATCTAGTTGGACTAGACATAATTGCT
CDS sequence (LotjaGi2g1v0367900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAAAAGTCTCCTTCTAACCTCATTTTCTCTAAAAGTTATAGTACTCCACTGTCTCCACCTCTCCCTCTTTGGAAT TACTACTCAAGCTAAACCATTCACCTTCTTCATGCATGACATTATAGGTGGATCAACCCCTTCAGAAAGAATTGTGAGTG GCATCATAGTGAACTCTCAAACCAATAACTTTCCTTTCTCAAAACCCAATAACAGGATCTTCCCATTTAAAGGTAGCATA CCATTTGTTGATACTACTACCATTGGTAGCAGTAGCACCATGGTGGTAAAAAACATTGACAAAAACAAGGTGGTTATTGA TAAGAACTCACTTCCATATGTCACATTAGAGAAGCTTTTGTTTGGAAGAATAACAGTGATTGATGATGAAATCACAAAAG GGCATGAGTTTGGTTCTGAGATTATTGGTAAAGCACAGGGGTTTCATTTGGCTAGCTCATTGGATGGAAGCAGCAAAACC ATGGCATTTTCAGCTTTGTTTCTTAATGAAGATCATGAAGAGGAAGATGCTATTAGTTTCTTCGGGGTACACAGGACTGC TACAAATGAGTCCCACATTGCTGTGGTTGGAGGAACAGGAAAATATGAAAATGCAAGAGGGTATGCTAAAATTGAGACTG TAAATCTGTCTGATCAAAACCCAAATTATGGAGTGGAAACACTTCTTCAGATTACTGTCTACCTAAGCTAG
Protein sequence (LotjaGi2g1v0367900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKSLLLTSFSLKVIVLHCLHLSLFGITTQAKPFTFFMHDIIGGSTPSERIVSGIIVNSQTNNFPFSKPNNRIFPFKGSI PFVDTTTIGSSSTMVVKNIDKNKVVIDKNSLPYVTLEKLLFGRITVIDDEITKGHEFGSEIIGKAQGFHLASSLDGSSKT MAFSALFLNEDHEEEDAISFFGVHRTATNESHIAVVGGTGKYENARGYAKIETVNLSDQNPNYGVETLLQITVYLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| PANTHER | 1 | 235 | 235 | 2.8E-103 | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 1 | 235 | 235 | 2.8E-103 | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| Phobius | 14 | 27 | 14 | - | – | |
| Phobius | 28 | 31 | 4 | - | – | |
| Phobius | 32 | 236 | 205 | - | – | |
| Pfam | 104 | 234 | 131 | 1.4E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0367900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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