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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004265
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 73 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.645s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0064029.1
n.a. Disease resistance response protein [Medicago truncatula] gi|357468459|ref|XP_003604514.1| chr0 21912459 21913235 -
2 domain predictions
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Lj0g3v0128669.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502109352|ref|XP_004493625.1| chr0 58162268 58163451 +
2 domain predictions
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Lj0g3v0163849.1
n.a. Disease resistance-responsive family protein [Theobroma cacao] gi|508722761|gb|EOY14658.1| chr0 77487239 77488049 +
2 domain predictions
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Lj0g3v0237979.1
n.a. Disease resistance-responsive (dirigent-like protein) family protein [Theobroma cacao] gi|508786906|gb|EOY34162.1| chr0 123399571 123400935 -
2 domain predictions
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Lj0g3v0250439.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502167803|ref|XP_004514253.1| chr0 129801987 129803111 +
2 domain predictions
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Lj0g3v0260229.1
n.a. Disease resistance-responsive (dirigent-like protein) family protein [Theobroma cacao] gi|508713525|gb|EOY05422.1| chr0 135211809 135213394 -
2 domain predictions
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Lj0g3v0260239.1
n.a. Disease resistance-responsive (dirigent-like protein) family protein [Theobroma cacao] gi|508713525|gb|EOY05422.1| chr0 135211894 135215572 -
2 domain predictions
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Lj0g3v0260249.1
n.a. Disease resistance-responsive (dirigent-like protein) family protein [Theobroma cacao] gi|508713525|gb|EOY05422.1| chr0 135214433 135215572 -
2 domain predictions
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Lj0g3v0329689.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502167803|ref|XP_004514253.1| chr0 172349993 172351262 -
2 domain predictions
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Lj0g3v0329699.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502167803|ref|XP_004514253.1| chr0 172349993 172351262 -
2 domain predictions
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Lj0g3v0346619.1
n.a. PREDICTED: mitochondrial substrate carrier family protein Y-like [Cicer arietinum] gi|502145147|ref|XP_004505900.1| chr0 181827164 181827784 -
2 domain predictions
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Lj0g3v0352129.1
n.a. Disease resistance response protein [Medicago truncatula] gi|357510061|ref|XP_003625319.1| chr0 185191618 185192070 +
2 domain predictions
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Lj1g3v2373630.1
n.a. dirigent-like protein 2 [Gossypium hirsutum] gi|256010126|gb|ACU55136.1| chr1 27978263 27978847 -
2 domain predictions
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Lj1g3v2373650.1
n.a. PREDICTED: disease resistance response protein 206-like [Fragaria vesca subsp]. vesca] gi|470117663|ref|XP_004294972.1| chr1 27988158 27988748 -
2 domain predictions
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Lj1g3v2391170.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502104337|ref|XP_004492507.1| chr1 28162103 28163090 +
2 domain predictions
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Lj1g3v4382270.1
n.a. PREDICTED: disease resistance response protein 206-like [Glycine max] gi|356572136|ref|XP_003554226.1| chr1 51283911 51284899 -
2 domain predictions
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Lj1g3v4382280.1
n.a. PREDICTED: disease resistance response protein 206-like [Glycine max] gi|356572136|ref|XP_003554226.1| chr1 51284086 51284899 -
2 domain predictions
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Lj1g3v4383290.1
n.a. PREDICTED: disease resistance response protein 206-like [Glycine max] gi|356572142|ref|XP_003554229.1| chr1 51291516 51292493 -
2 domain predictions
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Lj2g3v1195300.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502158728|ref|XP_004511259.1| chr2 18936041 18936271 +
2 domain predictions
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Lj2g3v1644320.1
n.a. Disease resistance response protein [Medicago truncatula] gi|357517719|ref|XP_003629148.1| chr2 25502958 25504020 +
2 domain predictions
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Lj2g3v1644330.1
n.a. Disease resistance response protein [Medicago truncatula] gi|357517719|ref|XP_003629148.1| chr2 25505412 25506279 +
2 domain predictions
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Lj3g3v0821330.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502158728|ref|XP_004511259.1| chr3 10030434 10031714 -
2 domain predictions
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Lj3g3v0821380.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502158725|ref|XP_004511258.1| chr3 10039908 10041016 -
2 domain predictions
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Lj3g3v0821410.1
n.a. PREDICTED: disease resistance response protein 206-like [Vitis vinifera] gi|359495088|ref|XP_002266452.2| chr3 10046144 10051696 -
2 domain predictions
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Lj3g3v0821420.1
n.a. PREDICTED: disease resistance response protein 206-like [Fragaria vesca subsp]. vesca] gi|470139311|ref|XP_004305394.1| chr3 10050210 10051696 -
2 domain predictions
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Lj3g3v1378350.1
n.a. dirigent-like protein 2 [Gossypium hirsutum] gi|256010126|gb|ACU55136.1| chr3 17626969 17627553 -
2 domain predictions
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Lj3g3v1378370.1
n.a. PREDICTED: disease resistance response protein 206-like [Fragaria vesca subsp]. vesca] gi|470117663|ref|XP_004294972.1| chr3 17636864 17637454 -
2 domain predictions
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Lj3g3v2920860.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502146005|ref|XP_004506278.1| chr3 36354238 36354870 +
2 domain predictions
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Lj3g3v2920870.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502146005|ref|XP_004506278.1| chr3 36356857 36357302 +
2 domain predictions
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Lj3g3v3153000.1
n.a. PREDICTED: mitochondrial substrate carrier family protein Y-like [Cicer arietinum] gi|502145147|ref|XP_004505900.1| chr3 39090157 39091383 +
2 domain predictions
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Lj4g3v0548820.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502139118|ref|XP_004503651.1| chr4 8947878 8948661 -
2 domain predictions
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Lj4g3v2106090.1
n.a. PREDICTED: mitochondrial substrate carrier family protein Y-like [Cicer arietinum] gi|502145147|ref|XP_004505900.1| chr4 28848577 28849299 -
2 domain predictions
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Lj4g3v2106160.1
n.a. PREDICTED: mitochondrial substrate carrier family protein Y-like [Cicer arietinum] gi|502145147|ref|XP_004505900.1| chr4 28852747 28853781 +
2 domain predictions
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Lj4g3v2266260.1
n.a. ATP citrate lyase alpha subunit [Glycyrrhiza uralensis] gi|148872938|gb|ABR15094.1| chr4 31525270 31532902 -
2 domain predictions
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Lj4g3v3002340.1
n.a. PREDICTED: disease resistance response protein 206-like [Glycine max] gi|356513313|ref|XP_003525358.1| chr4 39624718 39625777 -
2 domain predictions
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Lj4g3v3002360.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502139118|ref|XP_004503651.1| chr4 39631448 39631993 -
2 domain predictions
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Lj4g3v3002430.1
n.a. PREDICTED: disease resistance response protein 206-like [Fragaria vesca subsp]. vesca] gi|470129896|ref|XP_004300844.1| chr4 39647435 39648299 -
2 domain predictions
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Lj5g3v0746880.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502167510|ref|XP_004514163.1| chr5 10838860 10839930 +
2 domain predictions
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Lj5g3v2288580.1
n.a. Disease resistance response protein [Medicago truncatula] gi|357502731|ref|XP_003621654.1| chr5 33278621 33279877 -
2 domain predictions
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Lj5g3v2288590.1
n.a. Disease resistance-responsive family protein [Theobroma cacao] gi|508726475|gb|EOY18372.1| chr5 33282644 33283506 -
2 domain predictions
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Lj5g3v2288590.2
n.a. Disease resistance-responsive family protein [Theobroma cacao] gi|508726475|gb|EOY18372.1| chr5 33282644 33283506 -
2 domain predictions
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LotjaGi1g1v0277900.1
n.a. Dirigent protein; TAIR: AT3G13650.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9LID5|DIR7_ARATH Dirigent protein 7; TrEMBL-Plants: tr|I1N9C3|I1N9C3_SOYBN Dirigent protein; Found in the gene: LotjaGi1g1v0277900 LjG1.1_chr1 68067649 68068676 +
2 domain predictions
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LotjaGi1g1v0278000.1
n.a. Dirigent protein; TAIR: AT1G65870.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9SS03|DIR21_ARATH Dirigent protein 21; TrEMBL-Plants: tr|A0A151TUF9|A0A151TUF9_CAJCA Dirigent protein; Found in the gene: LotjaGi1g1v0278000 LjG1.1_chr1 68076893 68078104 +
2 domain predictions
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LotjaGi1g1v0447500.1
n.a. Dirigent protein; TAIR: AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9C523|DIR19_ARATH Dirigent protein 19; TrEMBL-Plants: tr|K7L1Z4|K7L1Z4_SOYBN Dirigent protein; Found in the gene: LotjaGi1g1v0447500 LjG1.1_chr1 94690777 94692021 +
2 domain predictions
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LotjaGi1g1v0447500.2
n.a. Dirigent protein; TAIR: AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9C523|DIR19_ARATH Dirigent protein 19; TrEMBL-Plants: tr|K7L1Z4|K7L1Z4_SOYBN Dirigent protein; Found in the gene: LotjaGi1g1v0447500 LjG1.1_chr1 94691141 94691716 +
2 domain predictions
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LotjaGi1g1v0733200.1
n.a. Dirigent protein; TAIR: AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9C523|DIR19_ARATH Dirigent protein 19; TrEMBL-Plants: tr|I3SM95|I3SM95_LOTJA Dirigent protein; Found in the gene: LotjaGi1g1v0733200 LjG1.1_chr1 130499084 130529830 +
2 domain predictions
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LotjaGi1g1v0733300_LC.1
n.a. Dirigent protein; TAIR: AT1G22900.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q67YM6|DIR11_ARATH Dirigent protein 11; TrEMBL-Plants: tr|I1N9C3|I1N9C3_SOYBN Dirigent protein; Found in the gene: LotjaGi1g1v0733300_LC LjG1.1_chr1 130555619 130558200 +
2 domain predictions
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LotjaGi2g1v0355500.1
n.a. Dirigent protein; TAIR: AT5G42510.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9FIG6|DIR1_ARATH Dirigent protein 1; TrEMBL-Plants: tr|I3T699|I3T699_LOTJA Dirigent protein; Found in the gene: LotjaGi2g1v0355500 LjG1.1_chr2 83164060 83169843 +
2 domain predictions
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LotjaGi2g1v0355600.1
n.a. Dirigent protein; TAIR: AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9C523|DIR19_ARATH Dirigent protein 19; TrEMBL-Plants: tr|I3T699|I3T699_LOTJA Dirigent protein; Found in the gene: LotjaGi2g1v0355600 LjG1.1_chr2 83170961 83172066 +
2 domain predictions
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LotjaGi2g1v0367900.1
n.a. Dirigent protein; TAIR: AT3G55230.1 Disease resistance-responsive (dirigent-like protein) family protein; Swiss-Prot: sp|Q9M3C8|DIR24_ARATH Dirigent protein 24; TrEMBL-Plants: tr|A0A0L9TIT2|A0A0L9TIT2_PHAAN Dirigent protein; Found in the gene: LotjaGi2g1v0367900 LjG1.1_chr2 86559966 86561383 +
2 domain predictions
 –